Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_023501.1 Length=159590 Score E Sequences producing significant alignments: (Bits) Value seq31478 114 1e-20 >seq31478 Length=1036 Score = 114 bits (126), Expect = 1e-20 Identities = 252/371 (68%), Gaps = 15/371 (4%) Strand=Plus/Minus Query 4000 ATTACATTCCATAATACGTATAACGATGCATCCGCTTCAGCAGAAGTACGTAACGTG--- 4056 |||||| |||| |||||||| |||||||| | || | |||||| | | || Sbjct 1000 ATTACAGTCCACAATACGTACAACGATGCTACAGCAGAAAACGAAGTATCTTATATGATT 941 Query 4057 CGAAATAACTCTACAGGTACTTCATTCCATACAGCTGTCGATGACTTTGAAGTTCAACAA 4116 || ||| | | || || || || |||| || || ||||| |||| | |||| Sbjct 940 CGTAATGATAAT-CAAGTC--TCGTTTCATATTGCAGTAGATGATAAAGAAGCTGTACAA 884 Query 4117 GTAGTGCCATTTGACCGTAATGCTTGGCATGCTGGAGACGGAACGTACGGAGCAGGTAAC 4176 | | || || || ||||| ||||||||| ||| ||||| |||| ||||| Sbjct 883 GGTATTCCTTTAGAACGTAACGCTTGGCATTGTGGTGACGGTGG---CGGAAATGGTAAT 827 Query 4177 CGTAACTCTATCGGTGTAGAAATCTGTTACTCTATGAGTGGTGGAGAGCGTTACCGTAAA 4236 ||||| |||||||| || ||||| || |||||| | || |||||||| || || |||| Sbjct 826 CGTAAATCTATCGGAGTTGAAATTTGCTACTCTTTAAGCGGTGGAGATCGATATTATAAA 767 Query 4237 GCTGAGTTGAATGC---TATCGAGCATATCTCTGACTTAATGGTACGATTCAATATTCCA 4293 || || ||||| ||||| || | | | |||||| || | |||||||||| Sbjct 766 GCAGAAGATAATGCAGCTATCGTTG-TAGCAC--AATTAATGAAACAGTACAATATTCCA 710 Query 4294 ATCTCTAAAGTTAAGACTCACCAAGAGCGTAATGGTAAATACTGTCCTCACCGTATGTTA 4353 || ||||||| || |||||| | | ||| || || |||||||| |||||| | Sbjct 709 ATTAGTAAAGTTCGCACACACCAATCATGGAGTGGAAAGTATTGTCCTCATCGTATGCTT 650 Query 4354 GATGAAGGACG 4364 |||||||| || Sbjct 649 GATGAAGGGCG 639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510047416906000