Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq80317 98.7 4e-16 seq2698 87.8 7e-13 seq80316 86.0 2e-12 seq4008 86.0 2e-12 seq593 80.6 1e-10 >seq80317 Length=158462 Score = 98.7 bits (108), Expect = 4e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 37209 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 37268 Query 50170 CTGCTCTACTCCGC 50183 |||||||||||||| Sbjct 37269 CTGCTCTACTCCGC 37282 >seq2698 Length=16708 Score = 87.8 bits (96), Expect = 7e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 50122 GGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACTGCTCTACTCC 50181 ||||||||||||| | |||| ||| ||||||||| |||||||||| |||||||||||||| Sbjct 2647 GGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAACTGCTCTACTCC 2588 Query 50182 GCA 50184 ||| Sbjct 2587 GCA 2585 >seq80316 Length=715001 Score = 86.0 bits (94), Expect = 2e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 50122 GGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACTGCTCTACTCC 50181 ||||||||||||| | |||| ||| ||||||||| |||||||||| |||||||||||||| Sbjct 457444 GGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAACTGCTCTACTCC 457503 Query 50182 GC 50183 || Sbjct 457504 GC 457505 >seq4008 Length=8913 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 6194 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 6135 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 6134 GCTCTACTCCGC 6123 >seq593 Length=170750 Score = 80.6 bits (88), Expect = 1e-10 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 |||| |||| | |||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 146727 GTTGTGGAGACAGGATTTGAACCCATGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 146668 Query 50170 CTGCTCTACTCCGC 50183 ||||| | |||||| Sbjct 146667 CTGCTTTGCTCCGC 146654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181429993337454