Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_023559.1 Length=46145 Score E Sequences producing significant alignments: (Bits) Value seq14923 136 1e-27 >seq14923 Length=1810 Score = 136 bits (150), Expect = 1e-27 Identities = 243/350 (69%), Gaps = 16/350 (5%) Strand=Plus/Plus Query 13689 GGCAAGACGATCGGATCGTTAAGACGCAATGTTATCAGGCCTCTTAAGGCTATGTTAGAG 13748 || || ||||| || ||| | || || ||||| | ||| ||||| |||||| || Sbjct 46 GGTAAAACGATTGGCTCGCACCGTCGTAACGTTATAACGCCACTTAAAAAGATGTTAAAG 105 Query 13749 AGCCGTGGTTATGCGGTTCACGATTCCA--GATCAGAAAATATGCTGATTGTTAGAAAGG 13806 ||||||||| |||| | || ||| || || |||||||| | | ||| || | Sbjct 106 TCTCGTGGTTATAAGGTTAAGGA--CCATCGAAGTGAGAATATGCTTACTATTACTAAAG 163 Query 13807 -----GCAGCAAGATTAATTACTATTTCTTATTCGGTGGGAAAGACGAATCAAGTCAGGA 13861 | | ||| || || ||||| | ||||| ||||| ||| | ||||| Sbjct 164 ATGGTGTAACAAACTTTTTTTATATTTTT-----GGTGGTAAAGATGAAGCGTCACAGGA 218 Query 13862 -CTTAGTTCAAGGAATTACTTTAGCCGGCTTTTTCTTTGATGAAGTGGCTTTAATGCCGC 13920 |||| | ||||| ||||||||||| || | ||||||||||||||| | | ||| | Sbjct 219 TCTTA-TCCAAGGTATTACTTTAGCAGGATGTTTCTTTGATGAAGTAGTGCTTATGGTTC 277 Query 13921 AGTCATTTGTAAACCAAGCCACGGCCCGGTGTTCGGTTGAGAACTCAAAACTATGGTTTA 13980 |||||||| |||||||| || | || ||||| || || |||||| | ||||||| Sbjct 278 GTTCATTTGTTAACCAAGCAACTGGGCGTTGTTCTGTAGAAGGTTCAAAAGTCTGGTTTA 337 Query 13981 ACTGCAACCCGGCTGGGCCTTATCACTGGTTTAAAGTCGAATGGCTTGAT 14030 |||| ||||| | |||||| || || ||||||||| |||||||| ||| Sbjct 338 ACTGTAACCCTGGTGGGCCATACCATTGGTTTAAAACAGAATGGCTAGAT 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147401679315078