Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_023560.1 Length=43454 Score E Sequences producing significant alignments: (Bits) Value seq14923 141 3e-29 >seq14923 Length=1810 Score = 141 bits (156), Expect = 3e-29 Identities = 239/344 (69%), Gaps = 4/344 (1%) Strand=Plus/Plus Query 13283 GGAAAGACGATCGGATCGTTAAGACGCAATGTTATCAGGCCTCTTAAGGCTATGTTAGAG 13342 || || ||||| || ||| | || || ||||| | ||| ||||| |||||| || Sbjct 46 GGTAAAACGATTGGCTCGCACCGTCGTAACGTTATAACGCCACTTAAAAAGATGTTAAAG 105 Query 13343 AGTCGTGGCTATGCGGTTCACGATTCCA--GATCAGAAAATATGCTGATCGTTAGAAAAG 13400 |||||| ||| |||| | || ||| || || |||||||| | ||| |||| Sbjct 106 TCTCGTGGTTATAAGGTTAAGGA--CCATCGAAGTGAGAATATGCTTACTATTACTAAAG 163 Query 13401 GCAGCAAGACTAATTACTATTTCTTATTCGGTGGGAAAGACGAATCAAGCCAGGACCTAG 13460 | || || | | || | || ||||| ||||| ||| | ||||| || Sbjct 164 ATGGTGTAACAAACTTTTTTTATATTTTTGGTGGTAAAGATGAAGCGTCACAGGATCTTA 223 Query 13461 TACAGGGGATTACTTTAGCCGGCTTTTTCTTTGATGAAGTGGCTTTAATGCCGCAGTCAT 13520 | || || ||||||||||| || | ||||||||||||||| | | ||| | |||| Sbjct 224 TCCAAGGTATTACTTTAGCAGGATGTTTCTTTGATGAAGTAGTGCTTATGGTTCGTTCAT 283 Query 13521 TTGTTAACCAGGCCACGGCCCGGTGTTCGGTTGACGATTCTAAACTCTGGTTTAACTGCA 13580 |||||||||| || || | || ||||| || || | ||| ||| ||||||||||||| | Sbjct 284 TTGTTAACCAAGCAACTGGGCGTTGTTCTGTAGAAGGTTCAAAAGTCTGGTTTAACTGTA 343 Query 13581 ACCCGGCTGGGCCTTATCACTGGTTTAAAGTCGAATGGCTTGAT 13624 |||| | |||||| || || ||||||||| |||||||| ||| Sbjct 344 ACCCTGGTGGGCCATACCATTGGTTTAAAACAGAATGGCTAGAT 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138798692370864