Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_023612.1 Length=39078 Score E Sequences producing significant alignments: (Bits) Value seq20449 297 5e-76 seq18183 178 3e-40 >seq20449 Length=1421 Score = 297 bits (328), Expect = 5e-76 Identities = 709/1063 (67%), Gaps = 8/1063 (1%) Strand=Plus/Plus Query 24751 TATTAGCTTTGTCATACCTGATGCGATATGCGAGGAAGGGGAGCGCGGCATGGCCGACGG 24810 |||||| | | || ||||| | ||| || || ||| |||||||||||||| || || Sbjct 41 TATTAGTGCTATTATCCCTGAGGTGATTTGTGAATCAGGAGAGCGCGGCATGGCGGATGG 100 Query 24811 TATCCGCGACGCTTTGCCGCCGGAGCGCATTATTGACCTAAATTTGAATGACGAGAACTA 24870 ||| | || || | || ||||| || || || | |||| | || || ||||| Sbjct 101 TATAAGGGATGCACTTCCCCCGGATAAAATAATAGATATTGATTTAAGCGATGAAAACTA 160 Query 24871 TATACCGCCGATGGATTTGACCGAAGTAATAAAGGCGCTTGGACGAAACGGGGCAAGCCG 24930 || || |||||| |||| |||||||| | | | || || || || || || | Sbjct 161 CATTGTTCCTATGGATCTGACTGAAGTAATTACCAAGTTAGGGCGCAAGGGAGCGAGTAG 220 Query 24931 TTTTGCTGATGAAATGATAGACTTTTT-GCAGAT-TGAAGGATTAAGCCGCTCCGAAAAA 24988 ||||| |||||| | ||||| ||||| | |||| || || | ||| | | || Sbjct 221 GTTTGCAGATGAAGTTATAGATTTTTTTGGAGATATGGAGAAGATGGCCCGTTCTAAGCG 280 Query 24989 T-ATTTAACCGACGCGGCCAAGGCGTCCGGGGGTAATTTATTGAATATCAAACGCATTAT 25047 | | |||| || || ||||| || || ||| ||| || ||||| || | || | Sbjct 281 TTACTTAAAAACAGCAGCTAAGGCATCAGGTGGTTCTTTGTTCAATATTAAGAGAATCCT 340 Query 25048 TGAGGATGAAAATTTTAGAGCGGCCCGCATCGAGGAGTTAATACAAGAGGGCAACATTAG 25107 ||||||||| | || | | || || | |||| ||||| || || | || Sbjct 341 AGAGGATGAAGAGTTCCGTGTAAGTATAATTGAACACCTAATTCAAGAAGGAAATAAGAG 400 Query 25108 ATTGGCCAATGAGTTATTGAGTTGGGGAACAAATGAGGATTTGGGCAATAAATGCGATGC 25167 ||| || | ||||| | |||||||| ||||| || | || | ||| |||||| Sbjct 401 ATTAGCAGAAGAGTTGCTTTCATGGGGAACGAATGAAGAACTAGGAAGCAAAGCCGATGC 460 Query 25168 GATTTTACACCGGCTCAACCGCTTTTTTGGCAATGATCGCTTATACGATATTTTCGCGCA 25227 | ||| | | | | || ||||| || ||| ||||| ||||| || |||| Sbjct 461 AGTATTAAATAGATTAGATGATTTCTTTGGTAACGATACCTTATTTGATATCTTTTCGCA 520 Query 25228 GCCGCCGCTTAAGGAATTGGATTTTAGAAAATGGATGCAAGAGGGCAAGGTTATCATTAT 25287 | ||| || || |||||||| ||||||||||| ||||| || ||| | ||||| Sbjct 521 GGATCCGAAAAAAGAGGTGGATTTTGCTAAATGGATGCAGGAGGGGAAAGTTGTTATTAT 580 Query 25288 CCGGGTACCAAACGGCCGAGGATTGGGCGAGCATGCGGTTAAAACGATTGTTCATTGGAT 25347 || |||||||| || || || || || || |||||| |||| || ||||| Sbjct 581 TCGCATACCAAACCGCA-AG--TTAGGTGAATTAGCATCTAAAACACTTGTCCACTGGAT 637 Query 25348 AACCTTAAAAACCTTTATGACACGGCTATTAATGACAAAAGAGGAACAGAAAAACGGCTG 25407 || |||||||| ||||||||||| | | |||| || || ||||| | || ||||| Sbjct 638 TACATTAAAAACATTTATGACACGAATGCTCATGAGTAAGGAAGAACAAAGTAATGGCTG 697 Query 25408 TTTTATCGTCTTTAATGAGCCGGAACAATACGAAACGGAAGGCCTTTCTAAACTCATGGG 25467 |||||| || |||||||||||||| ||||||| || || || | ||||||||||||| Sbjct 698 TTTTATGGTATTTAATGAGCCGGAGCAATACGCTACAGAGGGATTAACTAAACTCATGGG 757 Query 25468 CCGGATTGCAACCGAGGGAAGAAAAGAACGATTAGGCAGCCTT-TACGCTTTCCACCATT 25526 || |||| || || || | || |||||||| || || || || || ||||| |||| Sbjct 758 TCGTATTGGTACAGAAGGTCGCAAGGAACGATTCGG-GGCGTTATATGCGTTCCATCATT 816 Query 25527 GGAACAAGTTAAAAACATCATTACAAGAGAATTTGCAGGGCGGCGGCGTCCAACAATTCC 25586 |||| |||||| || ||||| || ||||| || ||||| || || |||||| || Sbjct 817 GGAATAAGTTACCGCACTCTTTACAGGAAAATTTACAAGGCGGTGGAGTACAACAAATCT 876 Query 25587 TTTTTATGAATGACTATACAAAAACCTTTGATTTATCAAAACATCGGTTTGAGGATACTA 25646 | ||| || || | | ||||| || || | || ||||||| || || || | Sbjct 877 TATTTTCAAACGATCACATTAAAACATTCGAATCGTCTCAACATCGATTAGAACCAACAA 936 Query 25647 TACCATTGGAGGAGGCTTATAGATTGCCGGCGTATCATGCCATAATTAGTGTGAGGGCTG 25706 | || || || || |||| ||| | ||||| || ||| |||||| |||| Sbjct 937 TCTCAACCGATGACGCAGCACGATTACCGCGATTCCATGCAATCATTTCTGTGAGAGCTG 996 Query 25707 CCGGGGAATTGCAGCCGGCGTTTATTTGCCGGATGGCCCCACCGATAAAGCCGAAATATG 25766 ||| || | || | |||||||||||| ||| ||||| | | | |||||| Sbjct 997 GCGGCGATCTACAACATGCGTTTATTTGCAAAATGAAACCACCTGTCGAACAAAAATATA 1056 Query 25767 ATAACTCTTTTCTCACCAAGCGGCATGCCCAAATGTACGGGCG 25809 |||||||| || || || | ||| |||| ||||||| || Sbjct 1057 GTAACTCTTCCCTAACTAAACAGCACACCCAGTTGTACGGTCG 1099 >seq18183 Length=1556 Score = 178 bits (196), Expect = 3e-40 Identities = 373/562 (66%), Gaps = 0/562 (0%) Strand=Plus/Plus Query 23453 AATAAAATAATCGTTTTCCGCATCATCCCGCATGCTGACGTCACAAATAACAATAAACGC 23512 || ||||| | |||| ||| || || || ||| | | ||| | |||||||| | ||| Sbjct 733 AACAAAATGGTTGTTTACCGTATTATTCCTCATAGTAATGTCTCCAATAACAACAGGCGC 792 Query 23513 TTATGGCGGGCAATTTACAAAATGTATGAGATGTACGAATCACCAATAAGCCGCTTGGAA 23572 |||||| ||| ||||| || |||||||| ||||| ||| ||||| || || || ||| Sbjct 793 TTATGGAAGGCCATTTATAAGATGTATGAAATGTATGAAGCACCAGGAACTCGTTTAGAA 852 Query 23573 CGAAACGGCTTTAAAATCACATACAGGGAAAAAGATTATTTTTGGTTTGACGTTATTTTT 23632 || | || | | || |||||||| |||| |||||||| || || || ||| Sbjct 853 CGCGATGGACTACGTTTTGTTTATAGGGAAAAGGATTTATTTTGGTTCGATGTGATATTT 912 Query 23633 AGGCAAGTCAACGGCGAGAAGAAAATTGAATTTTATATTGCAACAAGTGAATTCCAAGCG 23692 | |||| ||||| |||||||||| || |||||| | | || |||| |||||| Sbjct 913 AAACAAGAGGACGGCCAGAAGAAAATCGAGTTTTATGTATCCACTTCGGAATACCAAGCA 972 Query 23693 CaaaaactaaaacgaaaaattgaaaacaaaaTGAGCGTGACTATCACCGAGGCGAGCATT 23752 || | ||||| ||| | |||||||| ||||| || || || | || || | || Sbjct 973 ACCAAGTTGAAACGTAAATTAGAAAACAAGATGAGTGTCACAATAAAAGAAGCTGCCCTT 1032 Query 23753 AAGGACATACAAATACCGGTGGAAAATACAATTGTTCAAGAAATGCGCTATTTAAAGCAT 23812 || | |||||| |||| | ||||| || || | || || | ||| |||| || Sbjct 1033 GAGCAAATACAAGTACCTGAAGAAAACACGATCATCCAGGAGTTAAAATATCTAAAACAC 1092 Query 23813 GACATTTTTAGCCTAAACACCAATAGCAACGATGTAANNNNNNNNNNNNNNNNNATTTTA 23872 || || |||||| | ||||| || || || | | | Sbjct 1093 GATATATTTAGCTTGAACACAAACGCAAATGAGCAGAAGACACCTATTGCAGCAGTCATG 1152 Query 23873 AGCACCATAGACGAATTACAATTCGATGGCGATTTTGCCCGGTTGAGCATTTGCGCCGAG 23932 | ||| |||||||||||||| || ||||| || ||||| ||||| || | ||| || Sbjct 1153 AACACGATAGACGAATTACAGTTTGATGGAGACTTTGCGCGGTTAAGTGTATGCAATGAA 1212 Query 23933 GCAGAGAATCGCCAAAAATGGGTTAAGACGGCCCAATGGGCATATGAGAAGGTAAGTAAG 23992 |||||||| || || || ||| | |||| || ||||| ||||| ||| | |||| Sbjct 1213 GCAGAGAACCGTCAGAAGTGGATAAAGAACGCATCTTGGGCGTATGAAAAGCTTTCTAAG 1272 Query 23993 GGAAAAGTACCGCAGCGGGCCA 24014 || ||||| || || | |||| Sbjct 1273 GGGAAAGTTCCACAAAGAGCCA 1294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124808848124160