Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq121 152 1e-31 seq129 143 5e-29 seq464 109 1e-18 seq27 105 1e-17 seq1029 96.9 7e-15 seq184 87.8 4e-12 >seq121 Length=770561 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| ||||| || | ||| || || ||||| ||||| || || ||||| | Sbjct 402987 CCACCCCTCAGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 403046 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | | ||||| || || |||||||||||||| || | || ||||| || Sbjct 403047 AGCGTGCGTGCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGAG 403106 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 |||||||||||||| ||||||||||| || ||||| || || || || || | || || Sbjct 403107 ATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATGGTGTC-GGAGCTCTCCAC 403165 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| |||||||| || ||||| ||||||||||| |||||||| Sbjct 403166 CTCCAAAGTGATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCAT 403213 Score = 141 bits (156), Expect = 2e-28 Identities = 173/235 (74%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 82576 ATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTAT 82635 |||||| ||| || | | ||| || || | ||| || || ||||||||||| || || | Sbjct 402752 ATCACC-ACCACCACGGAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGAATGTTGT 402810 Query 82636 AATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGAT 82695 |||| | ||| | | ||| || || || || || |||||||| || || | || |||| Sbjct 402811 AATCTGCAAGAGTGCAACCATCCTCCAGCTGCTTCCCAGCAAAAATGAGGCGCTGCTGAT 402870 Query 82696 CTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG 82755 | || | ||| || ||||| || ||||||||||| || ||||| || || || ||| | Sbjct 402871 CCGGGGATATGCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCGATAGTGTCAGAAC 402930 Query 82756 GTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || |||||||| || ||||| ||||| | ||||| ||||| |||||||| Sbjct 402931 TCTCCACCTCCAAAGTAATGGTCTTCCCTGTAAGAGTCTTCACAAAGATCTGCAT 402985 Score = 116 bits (128), Expect = 7e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| || || || || | ||| ||||| || || |||||||| || ||||| | | Sbjct 403215 CCGCCTCTTAATCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAATCTGCT 403274 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || || || || || ||||||||||| || || | || || || || | Sbjct 403275 AATGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGTGCG 403334 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || ||||| || || ||||| ||||| ||||| ||||| || || | || | || || Sbjct 403335 ATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTC-TGAGCTCTCAAC 403393 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| || ||||| ||||| | ||||| || || |||||||| Sbjct 403394 CTCAAGAGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCAT 403441 Score = 107 bits (118), Expect = 4e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | |||||| || || || || || || || || || | || | | || Sbjct 403455 CGGAGAACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGTCTGCCAGGGTGCGGCCA 403514 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || || ||||||||||| || | || ||||| || || || || || ||| Sbjct 403515 TCGTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCCTCTTTA 403574 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || |||||||| ||||| || || ||||| || || | || | || || || | || || Sbjct 403575 TCCTGAATCTTAGCTTTCACGTTATCAATGGTGTC-TGAGCTCTCAACCTCAAGGGTGAT 403633 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| ||||| |||||||| Sbjct 403634 TGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 403669 >seq129 Length=753513 Score = 143 bits (158), Expect = 5e-29 Identities = 170/228 (75%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | || || || | ||| || || || |||||||| || || ||||||| Sbjct 556456 CCACCTCTGAGCCGAAGGACAAGGTGAAGCGTTGACTCTTTCTGGATGTTGTAATCAGCC 556515 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | || || || |||||||| ||||||||||| || || || || || || || Sbjct 556516 AAAGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGA 556575 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || || ||||| ||||||||||| || || ||||| |||||||| || || | || || Sbjct 556576 ATGCCCTCCTTGTCTTGAATCTTAGCCTTCACATTATCAATCGTGTC--GAGCTCTCAAC 556633 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || |||||||| || | ||||| ||||| |||||||| Sbjct 556634 TTCCAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 556681 Score = 138 bits (152), Expect = 2e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || || | ||||| || | ||| ||||| || |||||||| ||||| || |||| Sbjct 556681 TACCACCCCTGAGCCGCAGGACAAGGTGAAGAGTTGACTCTTTCTGGATATTGTAGTCAG 556740 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | | ||| || || |||||||| || ||||| || || || || || || || | Sbjct 556741 CTAAAGTGCGACCATCCTCAAGTTGTTTGCCGGCAAATATGAGCCTCTGCTGGTCAGGGG 556800 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || || |||||||| || || || || || ||||| ||||| || || || | || Sbjct 556801 GAATGCCCTCCTTATCCTGGATTTTGGCCTTAACATTATCAATTGTGTCCG-AGCTCTCA 556859 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| | || || ||||||||||| | ||||| ||||| |||||||| Sbjct 556860 ACTTCAAGGGTGATGGTCTTGCCTGTGAGAGTCTTAACAAAGATCTGCAT 556909 Score = 134 bits (148), Expect = 3e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || || |||||||| || || || || ||||| || | || | | || Sbjct 556240 CGGAGGACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCCAGCGTGCGCCCA 556299 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || ||||| ||||||||||| || || || ||||| || || || || ||||| Sbjct 556300 TCCTCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTG 556359 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || |||||||| || || ||||| |||||||| || || | || ||||||| ||| || Sbjct 556360 TCCTGAATCTTAGCCTTCACATTATCAATCGTGTC-GGAGCTCTCAACTTCCAGAGTGAT 556418 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | ||||| ||||| |||||||| Sbjct 556419 GGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 556454 Score = 132 bits (146), Expect = 9e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 |||||| || | || ||||| ||||| ||||| || ||||| || | || | | || Sbjct 556011 ACGCAGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGGGTACGCCC 556070 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || |||||||| || || || || ||||| ||||| || ||||| || Sbjct 556071 ATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGGATCCCTTCTTT 556130 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||||| ||||| || || ||||| || || || || | || | || ||||||| ||| | Sbjct 556131 GTCTTGGATCTTGGCCTTGACATTATCGATGGTGTC-TGAGCTCTCCACTTCCAGAGTGA 556189 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || | ||||| |||||||||||||| Sbjct 556190 TGGTCTTCCCAGTGAGGGTCTTCACAAATATCTGCAT 556226 >seq464 Length=225985 Score = 109 bits (120), Expect = 1e-18 Identities = 156/216 (72%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | ||| ||||| || || || || || |||||||| | || | | ||| Sbjct 137834 CGGAGAACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCGGCGAGGGTGCGGCCG 137893 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || ||||| || || || ||||| || | || || || || || || ||||||||| Sbjct 137894 TCCTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG-ATGCCTTCCTTA 137952 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774 || || ||||| || || || || || ||||| || || | || || ||||| || || Sbjct 137953 TCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTC-CGAGCTCTCGACCTCCAAGGTGAT 138011 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || | ||||| || || || ||||| Sbjct 138012 CGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 138047 >seq27 Length=1763170 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || ||||| ||||| ||||| || || | || | | ||||| || || || Sbjct 581099 TGGAGGGTGGATTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCCTCGAGCTGC 581040 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| || | || || ||||| || || || ||||| |||||||||||| Sbjct 581039 TTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTT 580980 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || || || || || ||||| | || || || | || || |||||||| || Sbjct 580979 GCCTTAACGTTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTG 580920 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 580919 AGAGTCTTGACGAAGATCTGCAT 580897 Score = 104 bits (114), Expect = 5e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| ||||| ||||| || || ||||| | || | | || || || || || Sbjct 581554 TGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCCAGGGTGCGGCCATCCTCCAGCTGC 581495 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| | | || || |||||||| || || ||||| || ||||| || Sbjct 581494 TTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTGAATTTTG 581435 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || ||||| ||||||||||| || | || || || | || || ||||| || || Sbjct 581434 GCCTTCACATTGTCAATCGTATC-CGAGCTCTCGACCTCAAGGGTGATGGTCTTCCCAGT 581376 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | || || ||||| |||||||| Sbjct 581375 GAGGGTTTTGACAAAGATCTGCAT 581352 >seq1029 Length=71094 Score = 96.9 bits (106), Expect = 7e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 ||||| || || ||||| || || || ||||||| ||| ||| ||| ||||| | || Sbjct 12271 TGCAGTGTTGACTCTTTTTGAATGTTGTAATCAGCTAGGGTTCGACCATCTTCCAACTGC 12330 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTG 82720 ||||||||||| || | ||||||||||||||| ||||| || ||||| || || Sbjct 12331 TTTCCAGCAAAAATCAATCTTTGTTGATCTGGGGGTATACCCTCCTTGTCCTG 12383 >seq184 Length=562535 Score = 87.8 bits (96), Expect = 4e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692 |||| |||| || | | ||| ||||| || | || ||||||||||| || | | Sbjct 77738 TATAGTCAGCAAGGGTGCGACCATCTTCCAGCTACTTCCCAGCAAAGATGAGATGCAGCT 77679 Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCAT 82752 | || ||||| || || ||||| ||||| || || || || ||||| ||||| || || Sbjct 77678 GGTCAGGAGGGATGCCCTCCTTGTCTTGGATATTAGCCTTGACATTATCAATTGTGTCGG 77619 Query 82753 TAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||| ||||| | ||||| || |||| || | ||||| ||||| |||||||| Sbjct 77618 AACTTTCAACTTCGAGGGTTATGGTTTTGCTGGTGAGGGTCTTGACAAAAATCTGCAT 77561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980816839367463