Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq121 123 6e-23 seq129 116 9e-21 seq464 105 2e-17 seq680 93.3 1e-13 seq474 93.3 1e-13 seq88 93.3 1e-13 seq40 89.7 1e-12 seq27 87.8 4e-12 >seq121 Length=770561 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||| || || || |||||||| ||||| ||||||||| Sbjct 402982 CAGATCTTTGTGAAGACTCTTACAGGGAAGACCATTACTTTGGAGGTGGAGAGTTCTGAC 402923 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || || || || || | ||||| || Sbjct 402922 ACTATCGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGCATATCCCCGGATCAGCAG 402863 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || || || |||||| |||| ||||| | ||| | || ||||||||| | Sbjct 402862 CGCCTCATTTTTGCTGGGAAGCAGCTGGAGGATGGTTGCACTCTTGCAGATTACAACATT 402803 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||||| || || ||||||||||| Sbjct 402802 CAGAAAGAATCCACCCTTCACCTTGT 402777 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || || |||||||||||||| ||||| || || ||| Sbjct 403210 CAGATCTTTGTAAAGACTTTGACGGGGAAGACGATCACTTTGGAGGTGGAGAGCTCCGAC 403151 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||| || || |||||||| | ||| || Sbjct 403150 ACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAAGGAATCTCTGTGGATCAGCAG 403091 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||| || ||||||||| | ||||||| | | || |||| ||||||||| | Sbjct 403090 CGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATGCACGCACGCTGGCAGATTACAACATT 403031 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| || || || |||||||| || Sbjct 403030 CAGAAGGAATCCACCCTTCACCTGGT 403005 >seq129 Length=753513 Score = 116 bits (128), Expect = 9e-21 Identities = 150/206 (73%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || ||||| ||||||| || || || ||| Sbjct 556678 CAGATCTTTGTGAAGACCCTTACTGGCAAGACCATCACCCTGGAAGTTGAGAGCTC-GAC 556620 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || || || ||| |||||| || Sbjct 556619 ACGATTGATAATGTGAAGGCTAAGATTCAAGACAAGGAGGGCATTCCCCCGGACCAGCAG 556560 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || || || | || ||||| | |||||||| ||||||||| || Sbjct 556559 AGGCTCATCTTTGCTGGCAAACAACTTGAGGATGGCCGCACTTTGGCTGATTACAACATC 556500 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| || ||||||||||| Sbjct 556499 CAGAAAGAGTCAACGCTTCACCTTGT 556474 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || |||||||| || || ||||| | ||||| || || || ||| Sbjct 556906 CAGATCTTTGTTAAGACTCTCACAGGCAAGACCATCACCCTTGAAGTTGAGAGCTCGGAC 556847 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| || || || || || || || ||| || ||| || Sbjct 556846 ACAATTGATAATGTTAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAG 556787 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || || || ||||| || || | || ||||| | ||||| || || ||||| || Sbjct 556786 AGGCTCATATTTGCCGGCAAACAACTTGAGGATGGTCGCACTTTAGCTGACTACAATATC 556727 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| |||||||||||||| Sbjct 556726 CAGAAAGAGTCAACTCTTCACCTTGT 556701 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| || || || |||||| ||||||| || || || ||| Sbjct 556451 CAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAAGTTGAGAGCTCCGAC 556392 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||||| || || || || ||| ||||| || Sbjct 556391 ACGATTGATAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAGCAG 556332 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || || ||| |||| ||||| | || |||| || || ||| | Sbjct 556331 AGGCTCATCTTTGCTGGTAAACAGCTGGAGGATGGGCGCACGCTGGCGGACTATAACATT 556272 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || || |||||||||||||| Sbjct 556271 CAAAAGGAGTCTACTCTTCA 556252 Score = 86.0 bits (94), Expect = 1e-11 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||||||||| ||||||||||||| ||| |||||||| ||||| | ||||| || Sbjct 556701 ACAAGGTGAAGAGTTGACTCTTTCTGGATATTGTAGTCAGCTAAAGTGCGACCATCCTCA 556760 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCC 204848 || || || ||||| || || |||| Sbjct 556761 AGTTGTTTGCCGGCAAATATGAGCC 556785 >seq464 Length=225985 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| || || || || ||||| |||||||| | |||||||| ||||| || Sbjct 137817 CAAATATTTGTGAAGACCCTTACGGGAAAGACGATCACCCTCGAAGTGGAGAGTTCGGAT 137758 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || || ||| ||||||| || Sbjct 137757 ACCATTGATAATGTGAAGGCGAAGATCCAGGACAAGGAGGGGATTCCGCCGGACCAGCAG 137698 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||| |||||| | || || || ||||| | ||||| ||||| | Sbjct 137697 AGGCTGATCTTCGCCGGGAAGCAGCTTGAGGACGGCAGGACGCTCGCCGACTACAATATT 137638 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || || || || Sbjct 137637 CAGAAGGAGTCCACCCTCCATCTGGT 137612 Score = 100 bits (110), Expect = 7e-16 Identities = 147/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || |||||||| ||||| || || || || ||||| |||| Sbjct 138033 CAAGACCCTCACCGGCAAGACGATCACCTTGGAGGTCGAGAGCTCGGACACGATCGACAA 137974 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || ||||| || |||||| || | || ||||| Sbjct 137973 CGTCAAGGCCAAGATCCAGGATAAGGAAGGCATCCC-CCGGACCAGCAGCGCCTGATCTT 137915 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| ||||| | || || || | || | |||||||| ||| |||| || ||||| Sbjct 137914 CGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCGCCGATTATAACATCCAAAAGGAGTC 137855 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| ||| | | ||||| Sbjct 137854 CACTCTCCACCTGGTTCTCCGCCTTCG 137828 >seq680 Length=135211 Score = 93.3 bits (102), Expect = 1e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 |||||| | || ||||| |||||||||||||| ||||| | || ||||| ||||||||| Sbjct 22517 CAAAGATTGATTTTCGCTGGAAAGCAGTTGGAGGATGGTCGAACCTTGGCTGATTACAAC 22576 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388 | || |||||||| || || || || ||||| |||||| Sbjct 22577 ATTCAAAAAGAGTCAACGCTGCATCTGGTTTTAAGACTT 22615 >seq474 Length=218880 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| | || ||||| || ||||| |||| Sbjct 25286 AAGACCCTGACGGGGAAGACTATCACCCTCGAGGTGGAGTCCTCCGACACCATCGACAAC 25227 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || ||| ||| || | || |||||| Sbjct 25226 GTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAGCAGCGCCTCATCTTC 25167 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | || || || | || | |||||||||||| ||||||| |||||| Sbjct 25166 GCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCCGATTACAACATCCAGAAGGAGTCT 25107 Query 206365 ACTCTTCACCTTGT 206378 ||||| ||||| || Sbjct 25106 ACTCTCCACCTCGT 25093 >seq88 Length=981168 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || ||||| || || || ||||| | || || || ||| ||| Sbjct 85225 CAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCGGAC 85166 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || || |||||| || Sbjct 85165 ACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGATCAGCAG 85106 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||||||| | || || || | || | ||||| |||||| || Sbjct 85105 CGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATC 85046 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| || || ||||| || Sbjct 85045 CAGAAGGAGTCCACCCTCCACCTCGT 85020 >seq40 Length=1536145 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 ||||| || || || || || || |||||||||||||| | ||| | || |||||||| Sbjct 682150 CAAAGGCTGATTTTTGCTGGGAAACAGTTGGAAGATGGTCGAACTCTAGCTGATTACAAT 682209 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388 | || |||||||| ||||||||||| |||||||| ||| Sbjct 682210 ATTCAAAAAGAGTCGACTCTTCACCTGGTTTTGAGGCTT 682248 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 204754 AAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCT 204813 ||| |||||||| ||||||||||| |||||||| || | ||| || ||||| | ||| | Sbjct 682248 AAGCCTCAAAACCAGGTGAAGAGTCGACTCTTTTTGAATATTGTAATCAGCTAGAGTTCG 682189 Query 204814 TCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||| ||| || || || || || |||| ||| ||| Sbjct 682188 ACCATCTTCCAACTGTTTCCCAGCAAAAATCAGCCTTTGCTGA 682146 >seq27 Length=1763170 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || || || |||| || || || || ||| Sbjct 581127 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGAGCTCCGAC 581186 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || |||||| || ||| || Sbjct 581187 ACCATCGACAATGTCAAGGCTAAGATCCAGGATAAGGAGGGAATTCCCCCAGACCAGCAG 581246 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||| ||||| | || ||||| | || || || || |||||| || Sbjct 581247 AGGCTGATCTTCGCCGGCAAGCAACTCGAGGATGGCCGCACCTTAGCGGACTACAACATC 581306 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || || ||||| || || || || Sbjct 581307 CAAAAGGAATCTACGCTCCATCTCGT 581332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180604633640957