Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq40 87.8 2e-12 seq1029 82.4 7e-11 >seq40 Length=1536145 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/144 (75%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || || ||||| ||||| || ||||||||||| || |||| | || ||||| | ||| Sbjct 682123 GACAAGGAGGGGATACCCCCAGATCAGCAAAGGCTGATTTTTGCTGGGAAACAGTTGGAA 682182 Query 25328 GATGATAGAAATGTCAGC-GATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||| | ||| | | ||| |||||||||||||||||||| || || |||| | || || Sbjct 682183 GATGGTCGAACTCT-AGCTGATTACAATATTCAAAAAGAGTCGACTCTTCACCTGGTTTT 682241 Query 25387 AAGATTGAGAGGAGGAA-AATGAT 25409 || | || || |||| |||||| Sbjct 682242 GAGGCTTAGGGGTGGAACAATGAT 682265 >seq1029 Length=71094 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/146 (74%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || || ||||||||||| || ||||| |||||| | |||| | || || || | ||| Sbjct 12380 GACAAGGAGGGTATACCCCCAGATCAACAAAGATTGATTTTTGCTGGAAAGCAGTTGGAA 12321 Query 25328 GATGATAGAAATGTCAGC-GATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||| | ||| | ||| |||||||| ||||||||||| || || | ||| | || || Sbjct 12320 GATGGTCGAACCCT-AGCTGATTACAACATTCAAAAAGAGTCAACACTGCATCTGGTTTT 12262 Query 25387 AAGATTGAGAGGAGGAA-AATGATCA 25411 ||| | || || |||| |||||||| Sbjct 12261 AAGGCTTAGGGGTGGAACAATGATCA 12236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444647541913440