Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq27 154 1e-32 seq88 129 6e-25 seq13 122 9e-23 seq121 120 3e-22 seq1025 104 2e-17 seq129 96.9 3e-15 seq184 87.8 2e-12 >seq27 Length=1763170 Score = 154 bits (170), Expect = 1e-32 Identities = 171/227 (75%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | |||||| | ||||| || || ||||||||||| || || ||||||||| || Sbjct 581122 CCACCCCGGAGTCG-AGGACGAGATGGAGGGTGGATTCCTTCTGGATATTGTAGTCGGCA 581064 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| ||||| ||||| |||| ||||||||| || || || Sbjct 581063 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGG 581004 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || |||||||| ||| || || ||| | || ||||| || ||||| Sbjct 581003 ATGCCCTCCTTGTCTTGAATCTTTGCCTTAACGTTGTCGATGGTATCGGAGGACTCCACC 580944 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | ||| || ||||| || ||||| Sbjct 580943 TCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 580897 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || ||||| ||||||||||| ||||||||||| | Sbjct 581350 CCACCACGGAGGCGGAGGACGAGATGGAGCGTAGATTCCTTTTGGATGTTGTAGTCCGCT 581291 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || ||||| || ||||| || || |||| | |||||| || || || Sbjct 581290 AAGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 581231 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | |||||||| || || Sbjct 581230 ATTCCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGGAGCTCTCGACC 581171 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || |||||||| || ||||| | || || ||||| || ||||| Sbjct 581170 TCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 581124 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| || || || ||||||||||| ||||||||||| || | Sbjct 581578 CCACCACGGAGGCGGAGCACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGCC 581519 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || ||||| |||||||||||||| || || || Sbjct 581518 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGGA 581459 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || |||||||| || || ||| | || || || || || Sbjct 581458 ATACCCTCCTTGTCCTGAATTTTGGCCTTCACATTGTCAATCGTATCCGAGCTCTCGACC 581399 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | ||||| || || || ||||| Sbjct 581398 TCAAGGGTGATGGTCTTCCCAGTGAGGGTTTTGACAAAGATCTGCAT 581352 >seq88 Length=981168 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||||| ||||| || |||||||||||| | Sbjct 85002 CCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 85061 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| || || || || || | ||||||||||| ||||| Sbjct 85062 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCGGG 85121 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || || || Sbjct 85122 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 85181 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || ||||| || ||||| | || || || || || ||||| ||| Sbjct 85182 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATCTTG 85232 >seq13 Length=2550137 Score = 122 bits (134), Expect = 9e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| || | ||| || | ||||| || || ||||| ||||| || |||||||||||| | Sbjct 1356592 TCCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1356651 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | |||| | ||| ||||||||||| || || || || | |||||||| || || || Sbjct 1356652 GAGGGTGCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 1356711 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||| || || || || || || ||||| ||| | ||||| || || || || Sbjct 1356712 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1356771 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || ||||| || || || | || || ||||| || ||||| ||| Sbjct 1356772 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTTG 1356823 >seq121 Length=770561 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || || || |||| ||| ||||| || ||||||||||| ||||||||||| || ||| Sbjct 402987 CCACCCCTCAGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCC 403046 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | ||| | | || |||||||| || || ||||| || | |||||||||||| | Sbjct 403047 AGC-GTGCGTGCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGA 403105 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || ||||| ||| ||||| || | |||||||| ||||| Sbjct 403106 GATTCCTTCCTTATCCTGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTCTCCAC 403165 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || || || || ||||| || || || || ||||| Sbjct 403166 CTCCAAAGTGATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCAT 403213 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | || ||||| |||||||| |||||||| ||||||||||| | Sbjct 403443 CCGCCCCTGAGGCGGAGAACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGTCTGCC 403502 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||||| ||||| || || ||||| |||| ||||||||||| || || Sbjct 403503 AGGGTGCGGCCATCGTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGGG 403562 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| || ||||| || ||| || || | ||||| || || || Sbjct 403563 ATCCCCTCTTTATCCTGAATCTTAGCTTTCACGTTATCAATGGTGTCTGAGCTCTCAACC 403622 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || ||||| | || || || || || ||||| Sbjct 403623 TCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 403669 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || |||||||| || ||||||||||| || || Sbjct 402759 CCACCACGGAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGCA 402818 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| || || |||||||| | ||||||||||| || | | Sbjct 402819 AGAGTGCAACCATCCTCCAGCTGCTTCCCAGCAAAAATGAGGCGCTGCTGATCCGGGGAT 402878 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| ||| || || || | ||||| || ||||| Sbjct 402879 ATGCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCGATAGTGTCAGAACTCTCCACC 402938 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||||||| || || || | ||| || || || || ||||| Sbjct 402939 TCCAAAGTAATGGTCTTCCCTGTAAGAGTCTTCACAAAGATCTGCAT 402985 >seq1025 Length=71329 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || ||||| ||||| || ||||||||||| | Sbjct 8504 CCGCCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGTATGTTGTAGTCAGCG 8445 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || || || | |||||||| || || || Sbjct 8444 AGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGG 8385 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 8384 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGAAGACTCCACC 8325 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | || || ||||| || ||||| Sbjct 8324 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 8278 >seq129 Length=753513 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || || || || ||||||||||| || ||||| ||||| | | ||| | Sbjct 556009 AGACGCAGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGGGTACGC 556068 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || |||||||| | | ||||||||| || || || |||||| Sbjct 556069 CCATCCTCAAGCTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCAGGAGGGATCCCTTCT 556128 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || ||||| || | ||||| || ||||| || ||||| Sbjct 556129 TTGTCTTGGATCTTGGCCTTGACATTATCGATGGTGTCTGAGCTCTCCACTTCCAGAGTG 556188 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | || || || || || ||||| Sbjct 556189 ATGGTCTTCCCAGTGAGGGTCTTCACAAATATCTGCAT 556226 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 || || || || |||||||||||||| |||| ||||| | ||| | || || ||||| Sbjct 556252 TGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCCAGC-GTGCGCCCATCCTCCAGCTG 556310 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||| || | | ||||||||| || || ||||| || || || ||||| || Sbjct 556311 TTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 556370 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || || | |||||||| || || || ||||| ||||| || || || Sbjct 556371 AGCCTTCACATTATCAATCGTGTCGGAGCTCTCAACTTCCAGAGTGATGGTCTTGCCAGT 556430 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || || ||||| Sbjct 556431 GAGGGTCTTCACAAAGATCTGCAT 556454 >seq184 Length=562535 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || || || ||||| |||| || |||| || || |||||||||||||||||||| || Sbjct 77957 TTACCACCACTGAGATGCAAGACAAGGTAAAGGGTCGATTCCTTTTGAATGTTGTAATCT 77898 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | || || || |||||||| || || | ||| || | ||| |||||||| || Sbjct 77897 GCTAGTGTATGCCTATCCTCGAGCTGCTTCCCAGAAAATATGAGACGTTGCTGATCAGGT 77838 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || ||||| || ||| || ||| | ||||| | || Sbjct 77837 GGGATCCCCTCCTTGTCCTGAATCTTGGCTTTCACATTGTCGATCGTGTCCAAGCTCTCA 77778 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGT 134689 || || ||||| ||||| || || || Sbjct 77777 ACCTCAAGAGTGATGGTCTTTCCAGT 77752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504890998958840