Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq295 127 3e-24 seq9 104 3e-17 seq210 96.9 4e-15 seq652 89.7 6e-13 seq617 89.7 6e-13 >seq295 Length=381392 Score = 127 bits (140), Expect = 3e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||| ||||| || ||||| || || || || |||||| ||||| |||||||| || Sbjct 144574 GTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGACCCGGCATGAGGCC 144633 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | |||| |||||| || |||||||||||||| ||||| || Sbjct 144634 GCGCTTCTTGAGCCAGAAGATAGAGCAGAAGGAGCCGGAGAAGAAGATCCCCTCAACGGC 144693 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 |||||||||| || || ||||||||||| Sbjct 144694 GGCAAACGCAACTAGACGCTCGGCGAAGGA 144723 >seq9 Length=2675258 Score = 104 bits (114), Expect = 3e-17 Identities = 216/318 (68%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599 || |||||||| || || | | ||||| || || || || ||||||||||| | | Sbjct 1603269 AAACCATCCATTTCCGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCATTCCCA--C 1603326 Query 11600 ATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATAC 11657 | | | || |||| ||| ||| | ||||||||||||||||| || ||||||||||| | Sbjct 1603327 CTCCGAGACCGGCACCGCGCTGCCTCCCCACCGCATCAATCTCGTCGATGAAGACAATGC 1603386 Query 11658 ATGGTTGATTTTCG--CGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACC 11715 | || | ||||| ||| | || || | ||| || |||| || || || || Sbjct 1603387 AGGG--GGCTTTCGACTTGGCCTTCTCGAACAAATCCCGGACCCGAGAAGCTCCAACTCC 1603444 Query 11716 AACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACC 11775 || || | |||||| || | | ||| | ||| || ||| || || | || || Sbjct 1603445 CACGAAGAGCTCCACGAATTCGGAGGCGGCGCAGGAGAAGAAGGGCACCCCGGCCTCGCC 1603504 Query 11776 CGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCC 11835 || | ||| ||||| ||||| |||||||| || || || ||| | | ||| ||| Sbjct 1603505 GGCCACGGCCCGGGCAAGGAGAGTCTTTCCGGTGCCGGGAGGACCGACCAAGAGGCAGCC 1603564 Query 11836 TCGGGGGATCTTGGCACC 11853 | |||||||||||| || Sbjct 1603565 TTTGGGGATCTTGGCGCC 1603582 >seq210 Length=498004 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||| ||||| || ||||| || || || || ||||| || || |||||||| || Sbjct 322144 GTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCCGGCATGAGGCC 322203 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | |||||| || |||||||||||||| || || ||| Sbjct 322204 TCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATCCCTTCAACAGC 322263 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAG 122820 || || || | ||||| || ||||| ||| Sbjct 322264 GGCGAAGGCCACGAGGCGCTCCGCGAAAGAG 322294 >seq652 Length=146776 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 111239 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298 ||||||||||||||||| ||||| || ||| | |||| |||||| || || ||| Sbjct 111787 ATTGATGCCAAATTGCACACAGCAGTTTCAGTAGGACTTGTGAACTCTATTATCTCAGTA 111728 Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358 |||||||| ||| ||| || ||||||| ||| | ||| ||||| || | ||||| | | Sbjct 111727 CATAAGTTTGAAGACTTGATAGTCCCCAGATTTTGTTGATTACTTTTTCTATTGCAAGTA 111668 Query 111359 TCCT 111362 |||| Sbjct 111667 TCCT 111664 >seq617 Length=160175 Score = 89.7 bits (98), Expect = 6e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 111211 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 111270 || ||| ||||| || ||| | || ||||||||||||||||| ||||| || ||| Sbjct 54763 CTTTTCTCTGACAAACCGTGGTAAAGCAATTGATGCCAAATTGCACACAGCAGTTTCAGT 54704 Query 111271 CTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATT 111330 | |||| |||||| || || ||||||||||| ||| || || ||||||| ||| Sbjct 54703 AGGACTTGTGAACTCTATTATCTCAGTACATAAGTTTGAAGATTTGATAGTCCCCAGATT 54644 Query 111331 CTTTTGGTTACTCTTCTTGTTGCACGCATCCT 111362 | ||| ||||| || | ||||| | ||||| Sbjct 54643 TTGTTGATTACTTTTTCTATTGCAGGTATCCT 54612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627401479423200