Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 8e-13 >seq3 Length=3346983 Score = 87.8 bits (96), Expect = 8e-13 Identities = 96/125 (77%), Gaps = 6/125 (5%) Strand=Plus/Plus Query 65120 TTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAAT--TGCT-GCATTTAAA 65176 ||||| ||||| ||||| ||||| ||||||||||| ||||| |||| ||| | | Sbjct 1186355 TTAATGTTGTTGCTACCAACAAAATCTTGAGCCATTCCAATAATGGTGCTAGCA---AGA 1186411 Query 65177 CTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACT 65236 ||| ||||| ||||| || |||||||||| || ||||| ||| |||||||||||| Sbjct 1186412 CTCTGCTCACCATGATGGTAGGCTGAATGTTCCGAAACATAACCAGAAAATTGAGCAACC 1186471 Query 65237 TTTAT 65241 | ||| Sbjct 1186472 TGTAT 1186476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235449301465050