Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq295 248 1e-60 seq210 194 2e-44 >seq295 Length=381392 Score = 248 bits (274), Expect = 1e-60 Identities = 618/920 (67%), Gaps = 29/920 (3%) Strand=Plus/Minus Query 59515 AGATGACGGACCCTATTCTCGCGCCGAGCACCGCGCGTTTCACAACCTTTCCTATACGGT 59574 ||||| ||| || | ||||| |||| | || || ||| | | || ||||| || | Sbjct 145181 AGATGGAGGAGCCCCTCCTCGCCCCGAACCTCGATCGCTTCTCGATGTTCCCTATCCGCT 145122 Query 59575 ACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGA 59634 |||| | |||||| |||| ||||| || ||| || || ||| ||| ||||||| Sbjct 145121 ACCCCCAGGTGTGGGAGATGTACAAGAAGGCCCTCGCCTCCTTTTGGACCGCCGAGGAGG 145062 Query 59635 TTGACCTCGCCGGAGACCTGAAGGATTGGGACAAG---CTCAATTACGACGAGCAGCATT 59691 | |||||| || | ||||| | ||| | | |||| |||| |||| || | Sbjct 145061 TCGACCTCTCCAGTGACCTCCCCCACTGGCTCCACTCCCTCACCAACGATGAGCGCCACT 145002 Query 59692 TCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAG 59751 ||||| |||| ||||||||||| || ||||| || || | || || | | Sbjct 145001 TCATCTCCCACATCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCCTCGAGAACCTCG 144942 Query 59752 ACATGAACTTT---TCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATC 59808 ||| ||| ||| || ||||||||| |||||||||| | ||||||| | | Sbjct 144941 CCATCCGCTTCATGTCC---GACGTCCAGATTCCCGAGGCCCGCGCCTTCTACGGCTTCC 144885 Query 59809 AG-TCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTC 59867 || ||| | |||| ||||||||||||| |||||| ||| | |||| | || Sbjct 144884 AGATCGCG-ATCGAGAACATCCACTCCGAGATGTACTCCCTCCTCCTCGAATCCTACATC 144826 Query 59868 AAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAA 59927 |||||||| || || || | | | || ||||| ||| | ||||| ||| ||||| | Sbjct 144825 AAGGATCCAGACGAAAAAGATCGCCTTTTCCGCGCCGTCGAGACCGTCCCGGCAGTGACC 144766 Query 59928 CAAAAAGCAGAATGGGCCATGCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCT 59986 | || || | |||||| | | |||||| | |||| | | ||| || || | ||||| Sbjct 144765 AAGAAGGCCCAGTGGGCCCTTCGGTGGATCGGGTCC-GCCGAATCCTTCGCCGAGCGTCT 144707 Query 59987 CATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTG 60046 | || ||||| ||| || || ||||||||||| ||||| ||||| |||| ||||| Sbjct 144706 AGTTGCGTTTGCCGCCGTTGAGGGGATCTTCTTCTCCGGCTCCTTCTGCTCTATCTTCTG 144647 Query 60047 GCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGA 60106 |||||| ||||| |||||||||||||| || | |||||||||||||| || ||||| || Sbjct 144646 GCTCAAGAAGCGCGGCCTCATGCCGGGTCTCACCTTCTCCAACGAGCTCATCTCCCGCGA 144587 Query 60107 CGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACACCT-ATTGGAAAAATGC 60164 |||||||||||| || || || || | ||||| || | ||| | | || || Sbjct 144586 CGAGGGCCTCCACTGCGACTTCGC-CTGCCTCCTCTACTCCCTCCTCAACCGCAA---GC 144531 Query 60165 CCTTCCAAGGATATTCACAAGATTGTTCAGTG----GGCTTGTGAAGTGGAGAGCGAGTT 60220 | || |||| |||| | | ||| | || ||| | ||||| ||||| Sbjct 144530 TC-TCTGAGGACCGCATCAAG-TCGATCATCGCCGACGCCGTTGACATCGAGAGGGAGTT 144473 Query 60221 CATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTA 60280 | | || ||||| || || | || ||| ||| | |||| ||||| Sbjct 144472 CGTTTGCGACGCGCTGCCGGTGGCGCTGGTGGGGATGAACGGGGATTTGATGAGCCAGTA 144413 Query 60281 CATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGGA-GAAGGACCAATT-TACGGC 60338 |||| |||| || ||||| || ||| ||| | | ||| | ||| | || ||||| Sbjct 144412 CATTGAGTTCGTGGCGGATCGGCTCTTGGGGGCGCTGGGATGCGGGA--AGTTGTACGGG 144355 Query 60339 GTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTT 60398 ||| || || ||||||||||||||| || ||| | | |||||||| || ||||| Sbjct 144354 GTGGCGAATCCATTCGACTGGATGGAGCTGATATCGCTTCAGGGGAAGACGAATTTCTTC 144295 Query 60399 GAGAAGCGGGTCGGGGATTA 60418 |||||| ||||||| || || Sbjct 144294 GAGAAGAGGGTCGGAGAATA 144275 >seq210 Length=498004 Score = 194 bits (214), Expect = 2e-44 Identities = 384/564 (68%), Gaps = 11/564 (2%) Strand=Plus/Minus Query 59562 TTTCCTATACGGTACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGG 59621 || || || ||||| || | |||||| |||| ||||| || ||| || |||||| Sbjct 322704 TTCCCGATCCGGTATCCCCAGGTGTGGGAGATGTACAAGAAGGCCGTCGCCTCTTTCTGG 322645 Query 59622 TCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGG---ACAAGCTCAATTAC 59678 | | ||||||| | |||||| ||| ||||| | ||| ||| |||| | Sbjct 322644 ACAGCCGAGGAGGTCGACCTCTCCGCCGACCTCCCCCACTGGCTCCACACCCTCACCCCC 322585 Query 59679 GACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTG 59738 ||||||| || |||||| ||||| ||||||||||| || ||| || || || Sbjct 322584 GACGAGCGCCACTTCATCTCCCACGTCCTCGCCTTCTTCGCCGCCTCTGACGGTATCGTC 322525 Query 59739 ATGGAAAATATAGACATGAACTTT---TCCAAGGATGTCCAGATTGCCGAGGCCCGGTCG 59795 | || || ||| | ||| ||| || |||||||| ||||||||||| | Sbjct 322524 CTCGAGAACCTAGCCGCCCGCTTCATGTCC---GACGTCCAGATCGCCGAGGCCCGCGCC 322468 Query 59796 TTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATC 59855 || |||| | ||| || ||| |||||||||||| ||| || || || | Sbjct 322467 TTTTACGGCTTCCAGATAGCCATCGAAAACATCCACTCCGAGTTGTATTCTCTTTTGCTG 322408 Query 59856 GATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGACGTCC 59915 || | |||| || || || || |||| | || || |||||| | |||||| Sbjct 322407 GAATCCTACATCAAAGACCCTGACGAAAAGGACCGCCTTTTTCGTGCCGTCGAGACGGTT 322348 Query 59916 CCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATG-AGTCCTGGAGCATCATT 59974 || || || | || || | ||||| | | |||||| |||||| | | || || Sbjct 322347 CCGGCGGTGGCGAAGAAGGCCCAGTGGGCGCTCCGGTGGATCCAGTCCTCGGAC-TCTTT 322289 Query 59975 TGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTG 60034 || | || ||| | || || || || ||||| ||||||||||| ||||| ||||| Sbjct 322288 CGCGGAGCGCCTCGTGGCCTTCGCCGCTGTTGAAGGGATCTTCTTCTCCGGCTCCTTCTG 322229 Query 60035 TGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCT 60094 | || ||||||||||| ||||| ||||||||||||||||| | ||||||||||||||| Sbjct 322228 CTCCATCTTCTGGCTCAAGAAGCGAGGCCTCATGCCGGGCCTCACTTTCTCCAACGAGCT 322169 Query 60095 GATTTCCCGGGACGAGGGCCTCCA 60118 || ||||| |||||||||||||| Sbjct 322168 CATCTCCCGCGACGAGGGCCTCCA 322145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547974101670480