Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq295 111 2e-19 seq41 93.3 5e-14 seq136 91.5 2e-13 seq63 91.5 2e-13 seq682 89.7 6e-13 seq26 89.7 6e-13 seq750 87.8 2e-12 >seq295 Length=381392 Score = 111 bits (122), Expect = 2e-19 Identities = 273/409 (67%), Gaps = 4/409 (1%) Strand=Plus/Plus Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 || || ||||| || || |||||||| | ||| ||||| | |||||||| || |||| Sbjct 144617 AGACCCGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAAGGAGCCGGAGAAG 144676 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924 ||||| || || || ||||| || || || || | ||||| | | | |||| Sbjct 144677 AAGATCCCCTCAACGGCGGCAAACGCAACTAGACGCTCGGCGAAGGATTCGGCGGACCCG 144736 Query 74925 ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGG 74984 ||||| | ||||| | || || | || || ||||| || |||| || || Sbjct 144737 ATCCACCGAAGGGCCCACTGGGCCTTCTTGGTCACTGCCGGGACGGTCTCGACGGCGCGG 144796 Query 74985 AAGAGGCTTGCCTTCTCTTCGGGATCCTTGACG-AGCTTGTCAATCATAAGTGAGTACGT 75043 || |||| | || || || |||||||||| | || | || | | || |||||| | Sbjct 144797 AAAAGGCGATCTTTTTCGTCTGGATCCTTGATGTAGGAT-TCGAGGAGGAGGGAGTACAT 144855 Query 75044 CTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAA 75102 ||| || || || |||| | ||| |||| | ||||||| | || ||||| | || Sbjct 144856 CTCGGAGTGGATGTTCTCGATCG-CGATCTGGAAGCCGTAGAAGGCGCGGGCCTCGGGAA 144914 Query 75103 TCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGG 75162 |||| || || || ||| ||| ||||| | ||||||||| || ||||||| Sbjct 144915 TCTGGACGTCGGACATGAAGCGGATGGCGAGGTTCTCGAGGACGATGCCATCGGAGGCGG 144974 Query 75163 CGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAG 75211 |||| || || || | ||| |||||||||||||||| ||||| Sbjct 144975 CGAAGAAGGCGAGGATGTGGGAGATGAAGTGGCGCTCATCGTTGGTGAG 145023 >seq41 Length=1533522 Score = 93.3 bits (102), Expect = 5e-14 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 69333 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 69274 Query 79684 TGAGCTACGAAAGCAA 79699 |||||||||||||||| Sbjct 69273 TGAGCTACGAAAGCAA 69258 >seq136 Length=728788 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 22992 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 23051 Query 79684 TGAGCTACGAAAGCA 79698 ||||||||||||||| Sbjct 23052 TGAGCTACGAAAGCA 23066 >seq63 Length=1185764 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 79622 GACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACC 79680 || |||||||| |||| | || |||| ||||||||||||||||||||||||||| ||| Sbjct 945381 GATTGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACC 945440 Query 79681 AATTGAGCTACGAAAGC 79697 || |||||||||||||| Sbjct 945441 AACTGAGCTACGAAAGC 945457 >seq682 Length=133987 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| | || ||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 87558 TGCTTTCATTTAGATTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 87499 Query 79684 TGAGCTACGAAAGCAA 79699 ||||||| |||||||| Sbjct 87498 TGAGCTATGAAAGCAA 87483 >seq26 Length=1847796 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 745693 TGCTTTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 745752 Query 79684 TGAGCTACGAAAGC 79697 |||||||||||||| Sbjct 745753 TGAGCTACGAAAGC 745766 >seq750 Length=114703 Score = 87.8 bits (96), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 79622 GACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACC 79680 || |||||||| |||| | || |||| ||||||||||||||||||||||||||| ||| Sbjct 108041 GAGTGCTTTCGTTGAGAATCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACC 108100 Query 79681 AATTGAGCTACGAAAGCA 79698 || ||||| ||||||||| Sbjct 108101 AACTGAGCCACGAAAGCA 108118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546666615656600