Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028746.1 Length=44249 Score E Sequences producing significant alignments: (Bits) Value seq31478 163 8e-36 >seq31478 Length=1036 Score = 163 bits (180), Expect = 8e-36 Identities = 254/361 (70%), Gaps = 4/361 (1%) Strand=Plus/Minus Query 15469 ATTACGTTTCACAATACCTATAATGATGCCCCAGCAGAAAATGAGATTCGCTATATGATC 15528 ||||| | |||||||| || || ||||| |||||||||| || | |||||||| Sbjct 1000 ATTACAGTCCACAATACGTACAACGATGCTACAGCAGAAAACGAAGTATCTTATATGATT 941 Query 15529 GGGAACAATAACGAGGTTTCGTTCCACGTTGCTGTGGACGATATGGAAGCTGTTCAGGGC 15588 | || |||| | || ||||| || |||| || || |||| |||||||| || || Sbjct 940 CGTAATGATAATCAAGTCTCGTTTCATATTGCAGTAGATGATAAAGAAGCTGTACAAGGT 881 Query 15589 ATTCCTTTTGATCGAAATGCCTGGCATTGCGGAGACGGGAACGGAACAGGAAACCGTCAG 15648 |||||||| || || || || |||||||| || ||||| ||||| || || ||| | Sbjct 880 ATTCCTTTAGAACGTAACGCTTGGCATTGTGGTGACGGTGGCGGAAATGGTAATCGTAAA 821 Query 15649 TCCATCGGCGTAGAGATTTGTTACTCT--AAGTCCGGCGGCAACCGCTATTACAAAGCAG 15706 || ||||| || || ||||| |||||| ||| ||| || | || ||||| ||||||| Sbjct 820 TCTATCGGAGTTGAAATTTGCTACTCTTTAAG--CGGTGGAGATCGATATTATAAAGCAG 763 Query 15707 AAGACCATGCGGCTATTATCATTGCCCAGCTTATGAAACAGTTTTGTATTCCTATTGGAA 15766 |||| |||| ||||| | | || || | |||||||||| |||||| ||| | | Sbjct 762 AAGATAATGCAGCTATCGTTGTAGCACAATTAATGAAACAGTACAATATTCCAATTAGTA 703 Query 15767 ATGTGGTTCCGCACCAGCACTGGAGTGGTAAATACTGCCCGCACAGAATGTTAGATGAGG 15826 | || | ||||| |||||||| || || || || || | ||| | ||||| | Sbjct 702 AAGTTCGCACACACCAATCATGGAGTGGAAAGTATTGTCCTCATCGTATGCTTGATGAAG 643 Query 15827 G 15827 | Sbjct 642 G 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141340265994294