Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028758.1 Length=35644 Score E Sequences producing significant alignments: (Bits) Value seq31478 190 5e-44 >seq31478 Length=1036 Score = 190 bits (210), Expect = 5e-44 Identities = 269/376 (72%), Gaps = 4/376 (1%) Strand=Plus/Minus Query 14285 ATGACACCAAAATATATTACGTTTCACAATACGGCTAATGATGCGCCTGCAGAAAATGAG 14344 |||| ||| ||| ||||| | ||||||||| || ||||| | |||||||| || Sbjct 1015 ATGAATCCAGAATTCATTACAGTCCACAATACGTACAACGATGCTACAGCAGAAAACGAA 956 Query 14345 ATCCGTTATATGATCGGTAACAATAACGAGGTTTCGTTCCACGTTGCTGTGGACGATAAG 14404 | ||||||||| |||| |||| | || ||||| || |||| || || ||||| Sbjct 955 GTATCTTATATGATTCGTAATGATAATCAAGTCTCGTTTCATATTGCAGTAGATGATAAA 896 Query 14405 GAAGCAGTTCAGGGAATTCCTTTTGATCGAAACGCCTGGCATTGCGGAGATGGAAACGGA 14464 ||||| || || || |||||||| || || ||||| |||||||| || || || |||| Sbjct 895 GAAGCTGTACAAGGTATTCCTTTAGAACGTAACGCTTGGCATTGTGGTGACGGTGGCGGA 836 Query 14465 ACAGGAAACCGTCAATCCATCGGCGTAGAGATTTGTTATTCC--AAGTCCGGCGGTAACC 14522 | || || ||| |||| ||||| || || ||||| || || ||| ||| || | | Sbjct 835 AATGGTAATCGTAAATCTATCGGAGTTGAAATTTGCTACTCTTTAAG--CGGTGGAGATC 778 Query 14523 GATATTATAAGGCCGAGGACAATGCGGCTATTGTCATTGCCCAACTAATGAAACAGTTTT 14582 |||||||||| || || || ||||| ||||| || | || ||| |||||||||||| Sbjct 777 GATATTATAAAGCAGAAGATAATGCAGCTATCGTTGTAGCACAATTAATGAAACAGTACA 718 Query 14583 GTATTCCTATTGAGAATGTGGTTCCACACCAGCACTGGAGTGGTAAATACTGTCCGCACA 14642 |||||| ||| || || ||||||| |||||||| || || ||||| || Sbjct 717 ATATTCCAATTAGTAAAGTTCGCACACACCAATCATGGAGTGGAAAGTATTGTCCTCATC 658 Query 14643 GAATGCTGGATGAAGG 14658 | ||||| |||||||| Sbjct 657 GTATGCTTGATGAAGG 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113830528850124