Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028767.1 Length=45653 Score E Sequences producing significant alignments: (Bits) Value seq31478 147 6e-31 seq5539 89.7 1e-13 >seq31478 Length=1036 Score = 147 bits (162), Expect = 6e-31 Identities = 221/312 (71%), Gaps = 4/312 (1%) Strand=Plus/Minus Query 15430 AAATGCCCAAACAAGATGACACCAAAATATATTACGTTTCACAATACCTACAATGATGCT 15489 || |||||| | | |||| ||| ||| ||||| | |||||||| ||||| |||||| Sbjct 1030 AAGTGCCCATATACAATGAATCCAGAATTCATTACAGTCCACAATACGTACAACGATGCT 971 Query 15490 CCAGCGGAGAATGAGATTCGCTATATGATTGGAAACAACAGAGAAGTTAGCTTCCACGTT 15549 |||| || || || | ||||||||| | || | | |||| || || || Sbjct 970 ACAGCAGAAAACGAAGTATCTTATATGATTCGTAATGATAATCAAGTCTCGTTTCATATT 911 Query 15550 GCTGTGGACGATAAAGAAGCTGTTCAGGGCATTCCTTTTGATCGAAATGCATGGCATTGC 15609 || || || |||||||||||||| || || |||||||| || || || || |||||||| Sbjct 910 GCAGTAGATGATAAAGAAGCTGTACAAGGTATTCCTTTAGAACGTAACGCTTGGCATTGT 851 Query 15610 GGAGATGGGAACGGAACAGGAAACCGTCAGTCCATCGGCGTAGAGATTTGTTATTCC--A 15667 || || || ||||| || || ||| | || ||||| || || ||||| || || | Sbjct 850 GGTGACGGTGGCGGAAATGGTAATCGTAAATCTATCGGAGTTGAAATTTGCTACTCTTTA 791 Query 15668 AGTCCGGCGGTAACCGATATTATAAGGCCGAGGACAATGCGGCTATTGTCATTGCCCAGC 15727 || ||| || | ||||||||||| || || || ||||| ||||| || | || || Sbjct 790 AG--CGGTGGAGATCGATATTATAAAGCAGAAGATAATGCAGCTATCGTTGTAGCACAAT 733 Query 15728 TTATGAAACAGT 15739 | |||||||||| Sbjct 732 TAATGAAACAGT 721 >seq5539 Length=5364 Score = 89.7 bits (98), Expect = 1e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 20743 CCTTATCCATAACATCCTGGTACTTTTTAAACTGGTCTTCTTCCATCTCACCAGTCATTT 20802 ||||||||||||| || | || |||||||||| || |||| ||| || ||| |||| | Sbjct 304 CCTTATCCATAACTTCTTTATATTTTTTAAACTCATCATCTTTCATATCGCCATTCATCT 363 Query 20803 GTAATAGAAAATTTCCTTTTGCGTATGTGTGTGAGAAAAACA 20844 |||| || ||||| || || || ||||| |||||||||| || Sbjct 364 GTAAAAGGAAATTCCCCTTCGCATATGTATGTGAGAAAAGCA 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145828780921710