Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= NC_028837.1
Length=41149
Score E
Sequences producing significant alignments: (Bits) Value
seq31478 190 5e-44
>seq31478
Length=1036
Score = 190 bits (210), Expect = 5e-44
Identities = 260/361 (72%), Gaps = 4/361 (1%)
Strand=Plus/Minus
Query 14286 ATTACGTTCCACAATACGTATAACGATGCTCCCGCAGAAAATGAGGTTCGTTACATGATC 14345
||||| ||||||||||||| ||||||||| | |||||||| || || ||| |||||
Sbjct 1000 ATTACAGTCCACAATACGTACAACGATGCTACAGCAGAAAACGAAGTATCTTATATGATT 941
Query 14346 GGGAACAATAACGAGGTTTCGTTCCACGTTGCTGTGGATGATAAGGAAGCTGTTCAGGGC 14405
| || |||| | || ||||| || |||| || |||||||| |||||||| || ||
Sbjct 940 CGTAATGATAATCAAGTCTCGTTTCATATTGCAGTAGATGATAAAGAAGCTGTACAAGGT 881
Query 14406 ATTCCTTTTGATCGAAATGCCTGGCATTGTGGAGACGGGAACGGGACAGGAAACCGTCAA 14465
|||||||| || || || || ||||||||||| ||||| ||| | || || ||| ||
Sbjct 880 ATTCCTTTAGAACGTAACGCTTGGCATTGTGGTGACGGTGGCGGAAATGGTAATCGTAAA 821
Query 14466 TCCATCGGCGTAGAGATTTGTTATTCC--AAGTCCGGCGGTAACCGATATTATAAGGCCG 14523
|| ||||| || || ||||| || || ||| ||| || | ||||||||||| || |
Sbjct 820 TCTATCGGAGTTGAAATTTGCTACTCTTTAAG--CGGTGGAGATCGATATTATAAAGCAG 763
Query 14524 AGGACAATGCGGCTATTATCATTGCCCAGCTTATGAAACAGTTTTGTATTCCTATTGAGA 14583
| || ||||| ||||| | | || || | |||||||||| |||||| ||| |
Sbjct 762 AAGATAATGCAGCTATCGTTGTAGCACAATTAATGAAACAGTACAATATTCCAATTAGTA 703
Query 14584 ATGTGGTTCCACACCAGCACTGGAGTGGTAAATACTGTCCGCACAGAATGTTAGATGAGG 14643
| || ||||||| |||||||| || || ||||| || | ||| | ||||| |
Sbjct 702 AAGTTCGCACACACCAATCATGGAGTGGAAAGTATTGTCCTCATCGTATGCTTGATGAAG 643
Query 14644 G 14644
|
Sbjct 642 G 642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 131429727336894
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |