Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028841.1 Length=44952 Score E Sequences producing significant alignments: (Bits) Value seq31478 199 1e-46 >seq31478 Length=1036 Score = 199 bits (220), Expect = 1e-46 Identities = 280/391 (72%), Gaps = 4/391 (1%) Strand=Plus/Minus Query 19600 AAATGCCCGAATAAAATGGCACCGAAATATATTACGTTTCACAACACGTCCAATGATGCT 19659 || ||||| ||| |||| || ||| ||||| | ||||| |||| ||| |||||| Sbjct 1030 AAGTGCCCATATACAATGAATCCAGAATTCATTACAGTCCACAATACGTACAACGATGCT 971 Query 19660 CCTGCAGAAAATGAGATCCGTTATATGATCGGGAATAATAATGAGGTTTCGTTCCACGTT 19719 | |||||||| || | ||||||||| | ||| ||||| | || ||||| || || Sbjct 970 ACAGCAGAAAACGAAGTATCTTATATGATTCGTAATGATAATCAAGTCTCGTTTCATATT 911 Query 19720 GCTGTGGACGATAAGGAAGCTGTTCAGGGCATTCCTTTTGATCGTAATGCCTGGCATTGT 19779 || || || ||||| |||||||| || || |||||||| || ||||| || ||||||||| Sbjct 910 GCAGTAGATGATAAAGAAGCTGTACAAGGTATTCCTTTAGAACGTAACGCTTGGCATTGT 851 Query 19780 GGAGACGGGAACGGAACAGGTAACCGTCAGTCCATCGGCGTAGAGATTTGCTATTC--CA 19837 || ||||| ||||| ||||| ||| | || ||||| || || |||||||| || | Sbjct 850 GGTGACGGTGGCGGAAATGGTAATCGTAAATCTATCGGAGTTGAAATTTGCTACTCTTTA 791 Query 19838 AGTCGGGCGGAAGCCGATATTATAAGGCCGAGGACAATGCGGCTATTGTCATTGCCCAAC 19897 || || ||| ||||||||||| || || || ||||| ||||| || | || ||| Sbjct 790 AG--CGGTGGAGATCGATATTATAAAGCAGAAGATAATGCAGCTATCGTTGTAGCACAAT 733 Query 19898 TAATGAAACAGTTTTGCATTCCTATTGGAAATGTGGTTCCACATCAGCATTGGAGTGGTA 19957 |||||||||||| ||||| ||| | || || |||| || |||||||| | Sbjct 732 TAATGAAACAGTACAATATTCCAATTAGTAAAGTTCGCACACACCAATCATGGAGTGGAA 673 Query 19958 AATACTGCCCGCACAGAATGTTAGATGAGGG 19988 | || || || || | ||| | ||||| || Sbjct 672 AGTATTGTCCTCATCGTATGCTTGATGAAGG 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143587720405956