Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028851.1 Length=37995 Score E Sequences producing significant alignments: (Bits) Value seq31478 190 5e-44 >seq31478 Length=1036 Score = 190 bits (210), Expect = 5e-44 Identities = 278/391 (71%), Gaps = 4/391 (1%) Strand=Plus/Minus Query 14250 AAATGCCCAAACAAGATGACACCAAAATATATTACGTTTCACAACACGTCCAATGATGCC 14309 || |||||| | | |||| ||| ||| ||||| | ||||| |||| ||| ||||| Sbjct 1030 AAGTGCCCATATACAATGAATCCAGAATTCATTACAGTCCACAATACGTACAACGATGCT 971 Query 14310 CCAGCAGAAAATGAGATTCGCTATATGATTGGAAACAACAATGAAGTCAGCTTCCACGTT 14369 |||||||||| || | ||||||||| | || | ||| ||||| || || || Sbjct 970 ACAGCAGAAAACGAAGTATCTTATATGATTCGTAATGATAATCAAGTCTCGTTTCATATT 911 Query 14370 GCTGTGGACGATAAAGAAGCTGTTCAGGGCATTCCTTTTGATCGAAATGCCTGGCATTGT 14429 || || || |||||||||||||| || || |||||||| || || || || ||||||||| Sbjct 910 GCAGTAGATGATAAAGAAGCTGTACAAGGTATTCCTTTAGAACGTAACGCTTGGCATTGT 851 Query 14430 GGAGACGGGAACGGGACAGGAAACCGTCAGTCCATCGGCGTAGAAATTTGTTACTCT--A 14487 || ||||| ||| | || || ||| | || ||||| || |||||||| |||||| | Sbjct 850 GGTGACGGTGGCGGAAATGGTAATCGTAAATCTATCGGAGTTGAAATTTGCTACTCTTTA 791 Query 14488 AGTCCGGCGGCAGCCGCTATTACAAAGCAGAAGACAATGCGGCTATTGTCATTGCCCAGC 14547 || ||| || || ||||| ||||||||||| ||||| ||||| || | || || Sbjct 790 AG--CGGTGGAGATCGATATTATAAAGCAGAAGATAATGCAGCTATCGTTGTAGCACAAT 733 Query 14548 TTATGAAACAGTTTTGTATTCCTATTGAGAATGTGGTTCCGCACCAGCACTGGAGTGGTA 14607 | |||||||||| |||||| ||| || || | ||||| |||||||| | Sbjct 732 TAATGAAACAGTACAATATTCCAATTAGTAAAGTTCGCACACACCAATCATGGAGTGGAA 673 Query 14608 AATACTGTCCGCACAGAATGTTAGATGAGGG 14638 | || ||||| || | ||| | ||||| || Sbjct 672 AGTATTGTCCTCATCGTATGCTTGATGAAGG 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121346553489978