Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_028956.1 Length=52139 Score E Sequences producing significant alignments: (Bits) Value seq8134 82.4 3e-11 >seq8134 Length=3162 Score = 82.4 bits (90), Expect = 3e-11 Identities = 176/263 (67%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 5560 TGGTATGCCTGTGTATATTCACGATGACGGAAAGGAAATTCCGTTCGATGCACTAAAGGC 5619 || || ||| | |||||||| |||||||| || ||||| || ||||||| | | Sbjct 1096 TGATAAGCCGATCTATATTCATGATGACGGCAAAGAAATGCCACATGATGCACCTCATTC 1037 Query 5620 GACACAGAAAATCACACAACTGAACGCTGAGGCAAAGCAACATCGAGAAGCTAAAGAGAA 5679 | | | ||| ||| | ||| ||| || || |||||| ||||| ||||| Sbjct 1036 GGTAGCAACAATTGCACGCTTAAACAATGAAGCTAAAACACATCGTGAAGCCAAAGAAGC 977 Query 5680 AGCGGAAGCCGACTTAAAAGCATTCTCAGGGATTGACGATCCGAAAGCTGCACTCGAGGC 5739 ||| ||| | |||||||| || ||| ||||| || || || || |||| Sbjct 976 AGCCGAAAAAGCATTAAAAGCTTTTGAAGGAATTGAAGACCCTGCGGCAGCTAAAAAGGC 917 Query 5740 ATTAAAGACGGTTGCCAATTTAGATGCTAAAAAGCTGATTGATGCCGGTGATGCGGAAAA 5799 |||| | || | ||| | |||| |||||||||| | ||||||||||| | || || Sbjct 916 ATTACAAACAATCCAAAATCTCGATGATAAAAAGCTGGTGGATGCCGGTGAAGTTGAGAA 857 Query 5800 AGTCAAAGCGGAAATCATCAAAG 5822 ||| ||||| ||| ||||||| Sbjct 856 AGTTAAAGCTGAAGCTATCAAAG 834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166564185351354