Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_029066.1 Length=48666 Score E Sequences producing significant alignments: (Bits) Value seq8134 98.7 3e-16 >seq8134 Length=3162 Score = 98.7 bits (108), Expect = 3e-16 Identities = 135/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 30071 ATCGGCGGCAGCTTCGCTCGCTCCAAGGTCATCGCCGAGAAGCTGGCTGTCCCGGCAGAC 30130 |||||||| | || ||||| || ||| ||| || || | || || || | ||| Sbjct 762 ATCGGCGGTGGTTTTGCTCGTTCTAAGTACATTCAAGACAACATTGCAGTACCTGTGGAC 703 Query 30131 ATGGTGCAGGCCACCTTCGGGAATCGCTTCAAGATCGAGGACGGCAAGGTCGTCGCCTAT 30190 ||||| ||||| ||||| || ||| |||||| ||||| ||||||||||| || || ||| Sbjct 702 ATGGTTCAGGCAACCTTTGGCCATCACTTCAAAATCGAAGACGGCAAGGTGGTTGCATAT 643 Query 30191 GACGCCAACGGCAACAAGA--TCTTCAGCCGTGCGCGCCCGGGTGAGCTGGCCGACTTCG 30248 || | |||||| | |||| | |||| |||| || |||||||| || || | | | Sbjct 642 GATCCGAACGGCGAAAAGATTTATTCA--CGTGTCCGACCGGGTGAACTTGCAAATGTTG 585 Query 30249 ATGAAGC 30255 ||||||| Sbjct 584 ATGAAGC 578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155461185107112