Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq17 84.2 2e-11 seq34 82.4 6e-11 >seq17 Length=2077861 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 |||||||||||| ||||||| | || || | ||||| || ||||| |||||| Sbjct 403550 TGAGCAATCATGCATGTCAAAAGCGAATACGACGCAATGTTAAATGGCACACCAAGACCC 403609 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 |||||||| || | ||||||| |||||| || ||||| || || | ||||||||||| Sbjct 403610 ATGTCTGCAGACCGTTGGTACATTTGGCATGATAGCTCACCATTCTCCACATAAAACTG 403668 >seq34 Length=1605203 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/121 (76%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTG--GCTACATTAAAAGGAACACCCAGAC 118603 ||||| |||||| ||||||| || || | | || || ||||| || ||||| |||| Sbjct 1338035 TGAGCGATCATGCATGTCAA--AAGTGAATACGACGCAACGTTAAATGGCACACCAAGAC 1337978 Query 118604 CCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACT 118663 |||||||||| || | |||| || |||||| || ||||| || || | |||||||||| Sbjct 1337977 CCATGTCTGCAGACCGTTGGTTCATTTGGCATGATAGCTCACCATTATCCACATAAAACT 1337918 Query 118664 G 118664 | Sbjct 1337917 G 1337917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414071083814788