Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq27 86.0 4e-12 >seq27 Length=1763170 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| ||||| || |||||||| || || |||| ||||| ||| | Sbjct 581352 ATGCAGATCTTTGTCAAAACCCTCACTGGGAAGACCATCACCCTTGAGGTCGAGAGCTCG 581411 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| ||||| || || ||||| ||||| || ||| |||| || | Sbjct 581412 GATACGATTGACAAT--GTGAAGGCCAAAATTCAGGACAAGGAGGGTATTCCTCCAGACC 581469 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || || || ||||| || || || |||| || | |||| | || | ||||||| Sbjct 581470 AGCAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGGCGGATTACA 581529 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||| || || || |||| | ||| |||| | || | ||||| ||| Sbjct 581530 ACATTCAGAAGGAATCCACTCTTCATCTGGTGCTCCGCCTCCGTGGTGGC 581579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355514059307859