Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_031024.1 Length=162308 Score E Sequences producing significant alignments: (Bits) Value seq31478 116 4e-21 >seq31478 Length=1036 Score = 116 bits (128), Expect = 4e-21 Identities = 202/290 (70%), Gaps = 9/290 (3%) Strand=Plus/Plus Query 27103 CGACCTTCATCTAACATACGGTGTGGGCAATATTTACCGTTACGCTCTTGGTGAGTCTTA 27162 || |||||||| | |||||| || || ||||| || || | | |||||| || | Sbjct 639 CGCCCTTCATCAAGCATACGATGAGGACAATACTTTCCACTCCATGATTGGTGTGTGCGA 698 Query 27163 ACTTTAGAGATTGGAATATTGAAGCGTACCATTAAATCTGAGATATGCTCGATAGCGT-- 27220 |||||| |||||||||||| | || |||||| | || | | ||||||| Sbjct 699 ACTTTACTAATTGGAATATTGTACTGTTTCATTAATTGTGCTACAA---CGATAGCTGCA 755 Query 27221 TTAACT-CAGCTTTACGATAACGTTCTCCACCGCTCAATGAGTAACAGATTTCTACACCG 27279 ||| || | |||||| ||| || ||||||||||| || ||||| || ||||| || ||| Sbjct 756 TTATCTTCTGCTTTATAATATCGATCTCCACCGCTTAAAGAGTAGCAAATTTCAACTCCG 815 Query 27280 ATAGAGTTACGGTTACCAGCTCCGTATGTGCCGTCTCCAGCGTGCCATGCATTGCGGTCA 27339 ||||| ||||| |||||| |||| ||||| ||| ||||| || || || || Sbjct 816 ATAGATTTACGATTACCATTTCCG---CCACCGTCACCACAATGCCAAGCGTTACGTTCT 872 Query 27340 AATGGTACGACTTGTTGAACTTCGAAATCATCGACTGCTGTATGGAATGA 27389 || || | ||||| | |||| |||||| ||||| |||| || || Sbjct 873 AAAGGAATACCTTGTACAGCTTCTTTATCATCTACTGCAATATGAAACGA 922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518736284841760