Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq33 118 1e-21 seq617 105 9e-18 seq652 102 1e-16 >seq33 Length=1606457 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217 ||| || ||||| | ||| | || || | |||| |||| ||||||||||||| ||| || Sbjct 1148409 ACCCCCTTGATCAACATAACGAGCAGTATCATTAAAAACCCTCAACATTGGAACAATGCC 1148468 Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA 78277 |||||||| |||||||| ||| |||||||| ||| |||| |||||||| | || Sbjct 1148469 ATTAGATGTCCCATTTGTCCCACGGATATAACTACCAGTTGCACGAATATTGTGAGCAGA 1148528 Query 78278 TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337 ||| || |||||||| || || ||| | ||| || || || ||||| || || Sbjct 1148529 TATGCCAATTCCTCCAGCAGATTTGCTTATAACAGCACATTCCTTTAAAGTATCATATAT 1148588 Query 78338 ACCCTCTATACTGTCATCCATCATG 78362 ||||| || || ||||| ||||| Sbjct 1148589 TCCCTCAATGCTATCATCTTTCATG 1148613 Score = 93.3 bits (102), Expect = 6e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 77916 TATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCAC 77975 || ||| |||||||||||| |||||| |||| ||||||| || |||||| ||||| Sbjct 1146375 TACAGCTTTTCAAATTCATCACCCCAACAATCAGCCAATCCTGGAGCTTCATTAGGGCAA 1146434 Query 77976 ATCAATGACCAGTCACCATCTTCCTT-AACTCGTTTCATAAAGAGATCAGGTATCCATAG 78034 | || ||||| | |||| | | || || | |||||| || | |||||| ||||| || Sbjct 1146435 AATAAGGACCATTGTCCAT-TACTTTGGACCCTTTTCATGAACAAATCAGGAATCCAGAG 1146493 Query 78035 AGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||| ||| |||||||| | ||| || ||||| Sbjct 1146494 GGCATAAAACAGATCTCGAGCTCTGTGCTCTTC 1146526 >seq617 Length=160175 Score = 105 bits (116), Expect = 9e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 || || ||||| | ||| | || || | |||| | || |||| ||| || | ||| || Sbjct 53368 CCCCCTTGATCAACATAACGAGCAGTATCATTAAACACCCTCAGCATCGGCACAATGCCA 53309 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 ||||| ||||||||||| ||| ||||||||| || | || || |||||| || || Sbjct 53308 TTAGAAGTTCCATTTGTCCCACGAATATAACTACCCGTGGCACGTATATTATGAACTGAA 53249 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || |||||||| || ||| ||| | ||| || |||| || || ||||| Sbjct 53248 ACACCAATTCCTCCAGCAGACTTGCTTATAACAGCACATTCCTTCAGAGTGTCATAGATT 53189 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 ||||| ||||| ||||| ||||| | ||| |||||||| Sbjct 53188 CCCTCAATACTATCATCTTTCATGCAGACAAGGAAACAGCT 53148 Score = 86.0 bits (94), Expect = 9e-12 Identities = 124/173 (72%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 ||||||||||||| | || ||| |||||| || || ||||| |||| ||||||| Sbjct 54355 CTCTCTTTCATATCTGGCGTACAGCTTTTCAAAATCTTCGCCCCAGCAATCAGCCAATCC 54296 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCAT--CTTCCTTAACTCGTTTCATA 78014 || |||||| ||||| | || |||||| | |||| ||| | || | | ||| Sbjct 54295 TGGAGCTTCATTAGGGCAAAACAGTGACCACTGTCCATAACTT--TGGACCCTCTCCATG 54238 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||||||||||| | ||| || ||| ||| |||||||| | || || ||||| Sbjct 54237 AAGAGATCAGGAACCCAGAGTGCATAAAAAAGATCTCGTGCCCTGTGCTCTTC 54185 >seq652 Length=146776 Score = 102 bits (112), Expect = 1e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 || || ||||| | ||| | || || |||||| | || | |||||| |||| ||| || Sbjct 110490 CCCCCTTGATCAACATAACGAGCAGTATTATTAAACACCCGCAACATCGGAACAATGCCA 110431 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 ||||| ||||||||||| ||| ||||||||| || | || || || ||| || || Sbjct 110430 TTAGAAGTTCCATTTGTCCCACGAATATAACTACCTGTAGCACGTATGTTATGAACTGAA 110371 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || |||||||| || ||| ||| | ||| || ||| || || ||||| Sbjct 110370 ACACCAATTCCTCCAGCAGACTTGCTTATGACAGCACATTCCATCAGAGTGTCATAGATT 110311 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 ||||| ||||| ||||| ||||| | ||| || ||||| Sbjct 110310 CCCTCAATACTATCATCTTTCATGCAGACAAGGAAGCAGCT 110270 Score = 96.9 bits (106), Expect = 5e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 ||||||||||| || |||| ||| ||||| || || |||||| ||| ||||||| Sbjct 111413 CTCTCTTTCATGTTTCATATACAGCTTCTCAAAATCTTCACCCCAACAGTCAGCCAATCC 111354 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTA-ACTCGTTTCATAA 78015 ||| |||| | ||||| | || ||||| | |||| | | || || | | ||||| Sbjct 111353 TGGGGCTTCACTAGGGCAAAACAGCGACCACTGTCCAT-TACTTTGGACCCTCTCCATAA 111295 Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 |||||||||| | ||| || ||| ||| |||||||| | ||||||||||| Sbjct 111294 AGAGATCAGGAACCCAAAGCGCATAAAAAAGATCTCGTGCCCTATGTTCTTC 111243 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||| |||||||||||||| || ||||| ||||| || ||||| || ||| | | || Sbjct 110168 AGTGCCTGCATTAAATAACGTTGGAGAAGCATGAGTGAACCAGCGTTGAGACATCAAATG 110109 Query 78458 GTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCA 78516 |||||| | | | || || || || | ||| || ||||| || ||||| | ||||| Sbjct 110108 ATATGTTCTGAGAACAGAATCAATATCATCCTTG-TGGATTCCAACAGCTACTCTCATCA 110050 Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576 ||| ||||| || ||||| || || | | ||||| | ||| ||| | || | Sbjct 110049 GCATGTGCTGTGGCCTTTCTACTACTTTTCCAGAAACTTTCAGGAGGTAAGATCTCTCAA 109990 Query 78577 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 ||| ||||| |||||||||| || |||||| || || ||||| || Sbjct 109989 GAGTCTTAAAGCCAAAATAGTCATAATCAAAGTCCCTGTCATAAATTAT 109941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693971378574880