Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq33 140 5e-28 seq617 120 4e-22 seq652 114 2e-20 >seq33 Length=1606457 Score = 140 bits (154), Expect = 5e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 ||| || ||||| | ||| | ||||| | |||| |||| ||||||||||||| |||||| Sbjct 1148409 ACCCCCTTGATCAACATAACGAGCAGTATCATTAAAAACCCTCAACATTGGAACAATGCC 1148468 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 |||||||| |||||||| ||| |||||||| ||| |||||||||||| | ||| Sbjct 1148469 ATTAGATGTCCCATTTGTCCCACGGATATAACTACCAGTTGCACGAATATTGTGAGCAGA 1148528 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 || ||| |||||||| || ||| || | |||||| || || || ||||| || Sbjct 1148529 TATGCCAATTCCTCCAGCAGATTTGCTTATAACAGCACATTCCTTTAAAGTATCATATAT 1148588 Query 76933 GCCCTCTATACTATCATCCATCATG 76957 ||||| || |||||||| ||||| Sbjct 1148589 TCCCTCAATGCTATCATCTTTCATG 1148613 Score = 87.8 bits (96), Expect = 3e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 |||||||||||| |||||| |||| |||| || ||| |||||| || || | || || Sbjct 1146383 TTCAAATTCATCACCCCAACAATCAGCCAATCCTGGAGCTTCATTAGGGCAAAATAAGGA 1146442 Query 76579 CCACTCACCATCTTCCTT-AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAA 76637 ||| | |||| | | || |||| |||||| || | |||||| ||||| || ||| || Sbjct 1146443 CCATTGTCCAT-TACTTTGGACCCTTTTCATGAACAAATCAGGAATCCAGAGGGCATAAA 1146501 Query 76638 ATAGATCTCGGGTTCTACGTTCTTC 76662 | |||||||| | ||| | ||||| Sbjct 1146502 ACAGATCTCGAGCTCTGTGCTCTTC 1146526 >seq617 Length=160175 Score = 120 bits (132), Expect = 4e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||| | ||| | ||||| | |||| | || |||| ||| || | |||||| Sbjct 53368 CCCCCTTGATCAACATAACGAGCAGTATCATTAAACACCCTCAGCATCGGCACAATGCCA 53309 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 ||||| || |||||||| ||| ||||||||| || ||||| |||||| || || Sbjct 53308 TTAGAAGTTCCATTTGTCCCACGAATATAACTACCCGTGGCACGTATATTATGAACTGAA 53249 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || || || | |||||| |||| ||||||||||| Sbjct 53248 ACACCAATTCCTCCAGCAGACTTGCTTATAACAGCACATTCCTTCAGAGTGTCATAGATT 53189 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 ||||| ||||||||||| ||||| | ||| |||||||| Sbjct 53188 CCCTCAATACTATCATCTTTCATGCAGACAAGGAAACAGCT 53148 Score = 100 bits (110), Expect = 4e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| ||||||||||| |||||||| || |||||||||||||| || ||| | | || Sbjct 53040 AGTGCCTGCATTAAATAATGTAGGGGAGGCATGAGTGAACCAGCGTTGAGACATCAAATG 52981 Query 77053 GTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCA 77111 ||||||| | ||| | || ||||| | ||| || ||||| ||||| || | ||||| Sbjct 52980 GTATGTTCTGAGAACAGAATCAATATCATCCTTG-TGGATTCCAACAGCAACTCTCATCA 52922 Query 77112 ACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 77171 ||| || || || | ||||| || | | |||||| | || ||| | || | Sbjct 52921 GCATGTGTTGCGGCCTCTCTACTACTTTTCCAGAAACTTTCAAGAGATAGGATCTCTCAA 52862 Query 77172 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||| |||||||||||||| | || ||| || || || ||||| || Sbjct 52861 GAGTCTTAAAACCAAAATAATCATAATCAAAATCCCTGTCATAAATTAT 52813 >seq652 Length=146776 Score = 114 bits (126), Expect = 2e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||| | ||| | ||||| |||||| | || | |||||| |||| |||||| Sbjct 110490 CCCCCTTGATCAACATAACGAGCAGTATTATTAAACACCCGCAACATCGGAACAATGCCA 110431 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 ||||| || |||||||| ||| ||||||||| || ||||| || ||| || || Sbjct 110430 TTAGAAGTTCCATTTGTCCCACGAATATAACTACCTGTAGCACGTATGTTATGAACTGAA 110371 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || || || | |||||| ||| ||||||||||| Sbjct 110370 ACACCAATTCCTCCAGCAGACTTGCTTATGACAGCACATTCCATCAGAGTGTCATAGATT 110311 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 ||||| ||||||||||| ||||| | ||| || ||||| Sbjct 110310 CCCTCAATACTATCATCTTTCATGCAGACAAGGAAGCAGCT 110270 Score = 104 bits (114), Expect = 3e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| ||||||||||| || || ||||| |||||||||||||| || ||| | | || Sbjct 110168 AGTGCCTGCATTAAATAACGTTGGAGAAGCATGAGTGAACCAGCGTTGAGACATCAAATG 110109 Query 77053 GTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCA 77111 |||||| | ||| | || ||||| | ||| || ||||| ||||| || | ||||| Sbjct 110108 ATATGTTCTGAGAACAGAATCAATATCATCCTTG-TGGATTCCAACAGCTACTCTCATCA 110050 Query 77112 ACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 77171 ||| ||||| || | |||||| || | | ||||| | ||| ||| | || | Sbjct 110049 GCATGTGCTGTGGCCTTTCTACTACTTTTCCAGAAACTTTCAGGAGGTAAGATCTCTCAA 109990 Query 77172 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||| ||||| |||||||||| || |||||| || || ||||| || Sbjct 109989 GAGTCTTAAAGCCAAAATAGTCATAATCAAAGTCCCTGTCATAAATTAT 109941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712218640597440