Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_031125.1 Length=41005 Score E Sequences producing significant alignments: (Bits) Value seq14923 80.6 7e-11 >seq14923 Length=1810 Score = 80.6 bits (88), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 887 TTCGGTGGTAAAGATGAAAGCAGC-CAAGATCTGATTCAAGGGATCACACTTGCCGGAAT 945 || ||||||||||||| |||| | || ||||| || ||||| || || | || ||| Sbjct 190 TTTGGTGGTAAAGATG-AAGCGTCACAGGATCTTATCCAAGGTATTACTTTAGCAGGATG 248 Query 946 GTTCTTTGATGAAGCAGCTCTCATGCCACAGTCGTTTGTCAATCAAGCGACAGCGCGTGT 1005 ||||||||||||| || || ||| | || ||||| || ||||| || | |||| Sbjct 249 TTTCTTTGATGAAGTAGTGCTTATGGTTCGTTCATTTGTTAACCAAGCAACTGGGCGTTG 308 Query 1006 TTCCGTTACTGGGGGCAAATACTGGTTCAATATGAACCCAGAGGGCCCGTATCACTGGTT 1065 ||| || || ||| |||||| || ||||| | || || || || ||||| Sbjct 309 TTCTGTAGAAGGTTCAAAAGTCTGGTTTAACTGTAACCCTGGTGGGCCATACCATTGGTT 368 Query 1066 CAAAACTGACTGGATTGATCAAGCGGACGAAAA 1098 ||||| || ||| | ||| | ||| | ||||| Sbjct 369 TAAAACAGAATGGCTAGATAAGGCGAAAGAAAA 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130969366831518