Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1025 161 9e-35 seq474 152 5e-32 seq88 143 2e-29 seq27 141 9e-29 seq464 134 1e-26 seq241 120 3e-22 seq121 105 6e-18 seq129 98.7 9e-16 >seq1025 Length=71329 Score = 161 bits (178), Expect = 9e-35 Identities = 176/232 (76%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | || ||||| || ||| ||||||||| ||||| ||||| | Sbjct 8506 CGCCGCCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGTATGTTGTAGTCAG 8447 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 |||||| || |||| ||||||||||| |||||||| || |||||||| ||||||| | Sbjct 8446 CGAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGAG 8387 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTC 41811 | | || |||||||||| ||| || ||| || | || | |||||| ||||| Sbjct 8386 GGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCG--ATGGTGTCGGAAGACTC 8329 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 8328 CACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCATG 8277 >seq474 Length=218880 Score = 152 bits (168), Expect = 5e-32 Identities = 175/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || || || | || || || || || ||||||||| ||||| || |||| Sbjct 25073 CGCCACCACGGAGGCGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGG 25132 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||||||| |||| ||||||||||| |||||||| || |||||||| ||||| | | Sbjct 25133 CGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCTGGCG 25192 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || |||||||||| || | || || | ||| | | | |||||| |||||| Sbjct 25193 GGATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCC 25251 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | || || || || |||||||| ||||| ||||| ||||||||||| Sbjct 25252 ACCTCGAGGGTGATAGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATGTT 25304 >seq88 Length=981168 Score = 143 bits (158), Expect = 2e-29 Identities = 173/233 (74%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | || || || || ||| ||||||||| ||||| ||||||| Sbjct 85000 CGCCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 85059 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||||||| |||| ||||||||||| |||||||| || |||||||| || |||| | Sbjct 85060 CGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGATCCGGCG 85119 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | || |||||||||| || | || || | ||| | | | ||||| ||||| Sbjct 85120 GGATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCG 85178 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | || || || || || || || ||||| || || |||||||| || Sbjct 85179 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATCTT 85231 >seq27 Length=1763170 Score = 141 bits (156), Expect = 9e-29 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| |||||||| || || ||||||| |||||||| |||| ||| Sbjct 581105 ACGAGATGGAGGGTGGATTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGGCCGTCCTCG 581046 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| ||||| ||||| | ||| | || |||||||| | || Sbjct 581045 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGT-CTTG 580987 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | | ||||| | |||| | | | || ||| ||||||||||| | || || || || Sbjct 580986 AATCTTTGCCTTAACGTTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTT 580927 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || ||||| ||||| |||||||| Sbjct 580926 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 580897 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| ||||| ||||| || ||||| ||||| | Sbjct 581350 CCACCACGGAGGCGGAGGACGAGATGGAGCGTAGATTCCTTTTGGATGTTGTAGTCCGCT 581291 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||| |||||||||||||| ||||| | ||| ||||| | |||| Sbjct 581290 AAGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGA 581231 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||| ||| ||| || ||| || | || | |||||| ||| | Sbjct 581230 ATTCCCTCCTTATCCTGGATCTTAGCCTTGACATTGTCG--ATGGTGTCGGAGCTCTCGA 581173 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| || || || || || || || ||||| ||||| ||||||||| Sbjct 581172 CCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 581123 Score = 98.7 bits (108), Expect = 9e-16 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||||||||| || ||| |||||||||||||| || || | Sbjct 581579 GCCACCACGGAGGCGGAGCACCAGATGAAGAGTGGATTCCTTCTGAATGTTGTAATCCGC 581520 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || |||||||| || || || |||| ||||| ||||| | || Sbjct 581519 CAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCTGGAGG 581460 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCA 41786 || | |||||||||| ||| |||| | ||||| Sbjct 581459 AATACCCTCCTTGTCC-TGAATTTTGGCCTTCA 581428 >seq464 Length=225985 Score = 134 bits (148), Expect = 1e-26 Identities = 172/232 (74%), Gaps = 9/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| || || ||| |||||| || |||||||| |||| | Sbjct 137822 CCTCCACGAAGGCGGAGAACCAGGTGGAGAGTGGACTCCTTTTGGATGTTATAATCGGCG 137881 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||| |||||||||||||| ||||||||||| ||||||| ||| Sbjct 137882 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCG-GGGG 137940 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || ||||| ||| || | || || | ||| | | | ||||| ||| ||| Sbjct 137941 ATGCCTTCCTTATCC-TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGCT---CTC 137996 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || ||||| || || || || ||||| ||||| || |||||| Sbjct 137997 GACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATG 138048 Score = 122 bits (134), Expect = 8e-23 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||||||||| || ||| |||||||||||| || ||||||| | Sbjct 137594 CCACCGCGGAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGAATATTGTAGTCGGCG 137653 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | |||| || |||||||| |||||||| ||||| | ||| ||||||| ||| Sbjct 137654 AGCGTCCTGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGA 137713 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGA---CTC 41811 | | |||||||||| ||| || ||||| | | | | || || ||| ||| Sbjct 137714 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCA-ATGGTATC---CGAACTCTC 137769 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || | || ||||| || ||||| || ||||| || || || ||||| Sbjct 137770 CACTTCGAGGGTGATCGTCTTTCCCGTAAGGGTCTTCACAAATATTTGCAT 137820 Score = 107 bits (118), Expect = 2e-18 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || ||| ||||||||||||||||||||||| Sbjct 138048 GCCTCCACGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGC 138107 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAG 41736 ||||||||| |||| |||||||||||||||||||| ||||| Sbjct 138108 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAG 138149 >seq241 Length=450715 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| || |||||||||| ||| || || |||| |||||||||||||||||||| Sbjct 239432 CTCCTTCTGGATATTATAGTCGGCGAGCGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 239373 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || || || ||||||| ||| | || |||||||| | || | || || | ||| Sbjct 239372 GATAAGACGTTGCTGGTCCGGGGGGATGCCCTCCTTGT-CTTGGATCTTGGCCTTGACGT 239314 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | || || ||||| ||||||| || || || || || || || ||||| | Sbjct 239313 TGTCGATCGTATCCGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCA 239254 Query 41850 CGAAAATCTGCAT 41862 |||| |||||||| Sbjct 239253 CGAAGATCTGCAT 239241 >seq121 Length=770561 Score = 105 bits (116), Expect = 6e-18 Identities = 170/238 (71%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 41629 ATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATA 41688 |||||| || || || ||||| | || || || || ||| || ||||||||||| || Sbjct 402752 ATCACCACCACCACGGAGACGAAGGACAAGGTGAAGGGTGGATTCTTTCTGAATGTTGTA 402811 Query 41689 GTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 || | || |||| | || || |||||||| || || || || |||||||| || || Sbjct 402812 ATCTGCAAGAGTGCAACCATCCTCCAGCTGCTTCCCAGCAAAAATGAGGCGCTGCTGATC 402871 Query 41749 CGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGA-CGACACAGTGTCGCT 41805 || || | || |||||||||| ||| | |||| ||||| | | || | |||||| Sbjct 402872 CGGGGATATGCCCTCCTTGTCC-TGAATCTTTGCCTTCACATTATCG--ATAGTGTCAGA 402928 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||||||| || || || || || || || ||||| || || ||||||||| Sbjct 402929 ACTCTCCACCTCCAAAGTAATGGTCTTCCCTGTAAGAGTCTTCACAAAGATCTGCATG 402986 Score = 102 bits (112), Expect = 8e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| || || ||| |||||||||||||| || || | || ||||| Sbjct 402996 AGCCGCAGCACCAGGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCTGCCAGCGTGCGT 403055 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || ||||||||||| || || || || || ||||| || ||| | | | | ||| Sbjct 403056 GCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCCACAGAGATTCCTTCC 403115 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 || ||| ||| | ||||| | || | | |||||| ||||||||||| || Sbjct 403116 TTATCC-TGAATCTTTGCCTTGACATTATCGATGGTGTCGGAGCTCTCCACCTCCAAAGT 403174 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || ||||||| |||||||| || ||||||||| Sbjct 403175 GATCGTCTTCCCCGTCAAAGTCTTTACAAAGATCTGCATG 403214 Score = 102 bits (112), Expect = 8e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | || || | ||||| ||||||||| |||||| || ||||| ||||| | Sbjct 403442 GCCGCCCCTGAGGCGGAGAACCAGGTGCAGCGTGGACTCCTTTTGGATGTTGTAGTCTGC 403501 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | ||||| |||||||| || || || ||||||||||| || || | || Sbjct 403502 CAGGGTGCGGCCATCGTCCAGCTGCTTCCCAGCAAAGATCAGGCGCTGCTGATCAGGTGG 403561 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | ||| || ||| ||| | || |||| ||| | | ||||| ||| || Sbjct 403562 GATCCCCTCTTTATCC-TGAATCTTAGCTTTCACGTTATCAATGGTGTCTGAGCT---CT 403617 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| | || || || || || || || ||||| || || |||||||| Sbjct 403618 CAACCTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 403669 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| | || || | ||||| || || ||| ||||||||| ||||| || || | Sbjct 403214 GCCGCCTCTTAATCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAATCTGC 403273 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||||| | || ||||||||||| || || || ||||||||||| ||||| | | Sbjct 403274 TAATGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAAATCAGGCGCTGCTGGTCAGGTGC 403333 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTC---GCTCGACTC 41811 | || |||||||||| ||| || |||| | | ||||| ||| ||| Sbjct 403334 GATGCCCTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGCT---CTC 403390 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 403391 AACCTCAAGAGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCATG 403442 >seq129 Length=753513 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||| ||| || || |||||| |||||||||||||| | Sbjct 556228 CCACCCCGAAGCCGGAGGACCAAATGAAGAGTAGACTCCTTTTGAATGTTATAGTCCGCC 556287 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| | || || ||||| || || || || || || | ||| || |||| |||| Sbjct 556288 AGCGTGCGCCCATCCTCCAGCTGTTTACCAGCAAAGATGAGCCTCTGCTGATCCGGGGGA 556347 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || | ||||| | | | | |||||| ||| | Sbjct 556348 ATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACATTATCA-ATCGTGTCGGAGCTCTCAA 556405 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | |||| || || || || || || || ||||| || || ||||||||| Sbjct 556406 CTTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATG 556455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461839864120400