Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq535817 89.7 4e-13 >seq535817 Length=6826 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || || |||||||| || || | ||||||||| ||||||||||||||||| || | Sbjct 4680 ACTTGTGCAATCATACACGTCAGAAGAGAATATGATGCAATGTTAAATGGCACACCAAGA 4621 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| |||||||| | |||||||| |||||||| | | ||||| |||||| || Sbjct 4620 CCCATGTCAGCTGAACGTTGATACATCTGACAGGATAATTCTCCATTCTCGACATAGAAC 4561 Query 101876 TG 101877 || Sbjct 4560 TG 4559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354287341087457