Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq535817 86.0 4e-12 >seq535817 Length=6826 Score = 86.0 bits (94), Expect = 4e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 97120 ACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGT 97179 || || || |||||||| || | |||||||| ||||||||||| ||||| || || Sbjct 4680 ACTTGTGCAATCATACACGTCAGAAGAGAATATGATGCAATGTTAAATGGCACACCAAGA 4621 Query 97180 CCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAAC 97239 ||||| |||||||| | |||||| | ||||||||| | | ||||| ||||| ||| Sbjct 4620 CCCATGTCAGCTGAACGTTGATACATCTGACAGGATAATTCTCCATTCTCGACATAGAAC 4561 Query 97240 TG 97241 || Sbjct 4560 TG 4559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340099026083990