Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4015 89.7 7e-13 >seq4015 Length=6327 Score = 89.7 bits (98), Expect = 7e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 ||| || ||||||| || | ||| || | ||| | || | ||||| |||| ||| || Sbjct 1489 TCCGCCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATCCC 1430 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296 |||||| | || || ||||| |||||||| ||| | |||||||| ||| || || Sbjct 1429 ATTGGACGTCCCGTTTGTCCCTCGAATATAGCTCCCAGTAGCACGAATGTTGTGAACAGA 1370 Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 | ||| ||||| || || ||| || | || || || | ||||||||||| Sbjct 1369 GACACCAATTCCTCCAGCAGATTTGCTTATGACAGCACACTCCTTCAGAGTATCATAGAT 1310 Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 72398 ||||| || |||||||| ||||| | || |||||||| Sbjct 1309 TCCCTCGATGCTATCATCTTTCATGCAGATAAGGAAACAGCT 1268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657869880367320