Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4015 98.7 3e-15 >seq4015 Length=6327 Score = 98.7 bits (108), Expect = 3e-15 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || ||| ||||||||| |||| ||| || || ||| | |||||| | || | Sbjct 1286 ATGAAAGATGATAGCATCGAGGGAATCTATGATACTCTGAAGGAGTGTGCTGTCATAAGC 1345 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 || ||| || ||||||||||| || | ||||| ||||||| || | || || || Sbjct 1346 AAATCTGCTGGAGGAATTGGTGTCTCTGTTCACAACATTCGTGCTACTG-GGAGCTATAT 1404 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || ||| || || |||||| | ||||| ||| | ||||| || | |||| Sbjct 1405 TCGAGGGACAAACGGGACGTCCAATGGGATTGTTCCTATGTTACGTGTCTTCAATGATAC 1464 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 ||| | || || || || || ||||| ||| | || || |||||| Sbjct 1465 TGCTCGTTATGTAGATCAAGGCGGAGGCAAGAGAAAGGGTGCGTTT 1510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1276940329994874