Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4015 87.8 2e-12 >seq4015 Length=6327 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 95080 GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139 || || | |||| | || || ||||| ||||||||||| || ||||| ||||| ||| Sbjct 3525 GGAGTAAGAAACTCTCTTCTGGTGGCTCCCATGCCCACTGCTTCCACTAGTCAGATTCTT 3584 Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195 ||||||||||||| || ||||||| ||| || ||| | |||| ||||||| || Sbjct 3585 GGCAACAACGAGTGCTTTGAACCCTACACATCTAACATATACAGTCGGCGGGTTCT 3640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484941860643720