Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4015 84.2 1e-11 >seq4015 Length=6327 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/230 (69%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 26056 AGCAAAACT-ACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGA 26114 || ||||| ||| ||||| || ||||| ||||||||||| || | ||||| ||||||| Sbjct 1514 AGTAAAACGCACCCTTTCTCTTGCCTCCGCCTTGATCTACATAACGAGCAGTATCATTGA 1455 Query 26115 AAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGAT 26173 | || ||||| ||||| ||||| ||| | | |||||||| | |||| | | Sbjct 1454 AGACACGTAACATAGGAAC-AATCCCATTGGACGTCCCGTTTGTCCCTCGAATATAGCTC 1396 Query 26174 CCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCT 26233 || || | | ||| | |||| || | ||| ||||| ||||| |||| || | Sbjct 1395 CCAGTAGCACGAATGTTGTGAACAGAGACACCAATTCCTCCAGCAGATTTGCTTATGACA 1336 Query 26234 GCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 ||||| || | ||||| | ||||| | ||||||||| ||||||| Sbjct 1335 GCACACTCCTTCAGAGTATCATAGATTCCCTCGATGCTATCATCTTTCAT 1286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248162134240025