Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq552517 84.2 3e-11 >seq552517 Length=11363 Score = 84.2 bits (92), Expect = 3e-11 Identities = 158/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 194197 GATGGTTGTAGAATAGTTAAAGTTGTTATTGG-TCAGTTACGTATACCTGAAATAGGGGA 194255 ||||||| ||| | || || ||| || | ||||| || ||||| ||||||| || Sbjct 9027 GATGGTTTAAGATTTGTCAAGGTTAGAATGCGATCAGTG-CGCATACCACAAATAGGAGA 9085 Query 194256 TAAATTTTGTTCG-GGAATGGCTCAAAAAGGAACTTGTGGTATGATTTATTCACAAGAAG 194314 ||| || | || |||| ||| || |||||| ||| |||| ||| ||||||| | Sbjct 9086 TAAGTTCAGCAGTAGGCATGG-TCAGAAGGGAACTGTTGGAATGACTTACACACAAGAGG 9144 Query 194315 ATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAATCCAAATTGTATTC 194374 | ||||||| |||| ||| || ||| ||||||||| | |||||| || ||||| Sbjct 9145 ACATGCCATGGACAATCGAAGGCATCACACCGGATATTATTGTGAATCCACATGCTATTC 9204 Query 194375 CGTCCAGAATGACCATTAATCAAATTATTGCTACTGTTATGGGTAAA 194421 | ||| | ||||| ||| || | |||| | ||||||||||| Sbjct 9205 CATCCCGTATGACTATTGGCCAGCTGATTGAGTGTATTATGGGTAAA 9251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619984434653160