Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq535817 87.8 1e-12 >seq535817 Length=6826 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 41094 AATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCG 41153 ||||| ||| | || ||||| |||||||| | |||| ||||||||| || || || || Sbjct 4574 AATGGAGAATTATCCTGTCAGATGTATCAACGTTCAGCTGACATGGGTCTTGGTGTGCCA 4633 Query 41154 TTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTT 41201 |||||||| || ||| |||| || |||| |||||||||||| ||| Sbjct 4634 TTTAACATTGCATCATATTCTCTTCTGACGTGTATGATTGCACAAGTT 4681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389794219200535