Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_006884.2 Length=178249 Score E Sequences producing significant alignments: (Bits) Value seq337 544 9e-150 seq14 544 9e-150 seq7 275 7e-69 seq4 250 3e-61 seq1 123 3e-23 seq8 82.4 9e-11 >seq337 Length=135516 Score = 544 bits (602), Expect = 9e-150 Identities = 707/975 (73%), Gaps = 2/975 (0%) Strand=Plus/Minus Query 170675 TGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTAATGATCCCA 170734 ||| |||| ||| || || || | ||| | || ||||| ||||| || |||||||| Sbjct 1617 TGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCC- 1559 Query 170735 TGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCTCCAGTCGA 170793 | ||| | || || || | || ||| | || |||||||||||||||||||| || Sbjct 1558 TACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGA 1499 Query 170794 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 170853 ||| || || || | || || ||| | |||||||| | ||||| ||||| || || || Sbjct 1498 TATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTC 1439 Query 170854 TGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATCTGGGAAGC 170913 ||||||| | |||| |||| || || ||||| || || || || || |||||||| Sbjct 1438 TGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGC 1379 Query 170914 AGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATTTTCCACTT 170973 || || | || || ||||| ||||| || |||||||| || || || || | ||||| Sbjct 1378 TGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTT 1319 Query 170974 CCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGACTAGGAAT 171033 | | |||| | || || |||||| | |||||||||| | | | || || || Sbjct 1318 CTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 1259 Query 171034 GAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCT 171093 | | |||||||| ||| ||||| ||||| ||||| | || || ||| || ||| | Sbjct 1258 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTT 1199 Query 171094 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 171153 | ||||| | ||||| || ||||||||||||||||| |||| || || ||||| Sbjct 1198 GATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 1139 Query 171154 GTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATAT 171213 |||||||| ||| | || ||||| || || |||||||| || ||||| || || || || Sbjct 1138 TTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCATTTCACAT 1079 Query 171214 GGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGT 171273 | ||||||||| ||| | ||||| ||| || |||||||| ||||| ||||| | || Sbjct 1078 GTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 1019 Query 171274 GACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCTATAAGTT 171333 || ||| | | ||||| || || ||||| || ||| | || | || || || || Sbjct 1018 AACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATT 959 Query 171334 CGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAAT 171393 || ||||||||||| || ||||||||||| |||||||| || || || ||| ||||||| Sbjct 958 TGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGGTCGATTAAT 899 Query 171394 CTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCC 171453 |||||| ||||| ||||||||||||||||| |||||||||||| | |||| | || Sbjct 898 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 839 Query 171454 TGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 171513 |||||| | | ||||| || || | ||||| |||| |||||||||||||| || || Sbjct 838 TGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGG 779 Query 171514 ATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAACATGGGGAGA 171573 |||||| ||||||||||| || || ||| | || || | || |||| || Sbjct 778 ATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGA 719 Query 171574 TGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTT 171633 | | | ||| | || || ||||| |||||||| ||||| ||| | ||||| |||||||| Sbjct 718 TATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTT 659 Query 171634 CCCACTAGACCTAGC 171648 ||| ||||||||||| Sbjct 658 CCCTCTAGACCTAGC 644 Score = 345 bits (382), Expect = 5e-90 Identities = 699/1038 (67%), Gaps = 21/1038 (2%) Strand=Plus/Plus Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854 ||||| || | || || |||||| || || |||||||| || | |||||||| || Sbjct 8990 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 9049 Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914 || || || || ||||||||||| | || | || |||||||| ||| |||||||| Sbjct 9050 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 9109 Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974 || || || ||||| || ||||| | || || ||| | || || || || ||| Sbjct 9110 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTA 9169 Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034 || || || || || || |||| || | | | || | | ||| | |||||||| Sbjct 9170 ACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGC 9229 Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094 || || ||||| || ||| || || |||| |||||||||||| || |||| ||||| Sbjct 9230 CCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTC 9289 Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154 || | ||||| | |||| ||| |||||||||||| | | || ||||| |||| | Sbjct 9290 GCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGG 9349 Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214 |||| | || ||||| || ||| | ||||||| | || ||||| || Sbjct 9350 TCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTT 9409 Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274 | | || || || |||||| | || || | |||||||||| || || ||||| Sbjct 9410 TCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGC 9469 Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334 || ||||| || ||||| | ||| | ||| | || || || || ||| || | || Sbjct 9470 GTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAAC 9529 Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394 ||||||||||||||||| || || || || | || | ||| | ||||| || || ||| Sbjct 9530 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCAT 9589 Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 172454 || || || || |||| ||| | ||| || || | ||| ||| Sbjct 9590 GGGGCTACCGT--AGAAAACACTCTAT---------TC-GAAGATGGTGATGGT------ 9631 Query 172455 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 172514 | | || ||| | || || | || || || | |||||||||||| ||| | Sbjct 9632 ---GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTC 9688 Query 172515 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 172574 ||||||||| | || ||||| || || |||||| | || ||||| || ||| | | ||| Sbjct 9689 ACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTA 9748 Query 172575 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 172634 || ||| ||||| | || ||||| |||| ||| | |||| |||| || | || Sbjct 9749 CATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTT 9808 Query 172635 GGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 172694 || || || || ||||| | || || ||||| || || || || || | ||||| ||| Sbjct 9809 GGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 9868 Query 172695 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 172754 || || || ||||| || |||||||| || || |||||| | || || ||||| | || Sbjct 9869 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCG 9928 Query 172755 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 172814 |||||| || || ||||| || ||||| || || | ||||| || || || | ||| Sbjct 9929 TGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCA 9988 Query 172815 CGAGGCAACGCACTATAA 172832 || || ||||| || ||| Sbjct 9989 CGTGGAAACGCTCTTTAA 10006 >seq14 Length=147140 Score = 544 bits (602), Expect = 9e-150 Identities = 707/975 (73%), Gaps = 2/975 (0%) Strand=Plus/Minus Query 170675 TGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTAATGATCCCA 170734 ||| |||| ||| || || || | ||| | || ||||| ||||| || |||||||| Sbjct 81962 TGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCC- 81904 Query 170735 TGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCTCCAGTCGA 170793 | ||| | || || || | || ||| | || |||||||||||||||||||| || Sbjct 81903 TACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGA 81844 Query 170794 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 170853 ||| || || || | || || ||| | |||||||| | ||||| ||||| || || || Sbjct 81843 TATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATTTC 81784 Query 170854 TGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATCTGGGAAGC 170913 ||||||| | |||| |||| || || ||||| || || || || || |||||||| Sbjct 81783 TGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATTTGGGAAGC 81724 Query 170914 AGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATTTTCCACTT 170973 || || | || || ||||| ||||| || |||||||| || || || || | ||||| Sbjct 81723 TGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTT 81664 Query 170974 CCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGACTAGGAAT 171033 | | |||| | || || |||||| | |||||||||| | | | || || || Sbjct 81663 CTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 81604 Query 171034 GAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCT 171093 | | |||||||| ||| ||||| ||||| ||||| | || || ||| || ||| | Sbjct 81603 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTT 81544 Query 171094 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 171153 | ||||| | ||||| || ||||||||||||||||| |||| || || ||||| Sbjct 81543 GATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 81484 Query 171154 GTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATAT 171213 |||||||| ||| | || ||||| || || |||||||| || ||||| || || || || Sbjct 81483 TTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCATTTCACAT 81424 Query 171214 GGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGT 171273 | ||||||||| ||| | ||||| ||| || |||||||| ||||| ||||| | || Sbjct 81423 GTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 81364 Query 171274 GACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCTATAAGTT 171333 || ||| | | ||||| || || ||||| || ||| | || | || || || || Sbjct 81363 AACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGTTACAAATT 81304 Query 171334 CGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAAT 171393 || ||||||||||| || ||||||||||| |||||||| || || || ||| ||||||| Sbjct 81303 TGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGGTCGATTAAT 81244 Query 171394 CTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCC 171453 |||||| ||||| ||||||||||||||||| |||||||||||| | |||| | || Sbjct 81243 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 81184 Query 171454 TGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 171513 |||||| | | ||||| || || | ||||| |||| |||||||||||||| || || Sbjct 81183 TGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAACCTAAATGG 81124 Query 171514 ATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGTACCAACATGGGGAGA 171573 |||||| ||||||||||| || || ||| | || || | || |||| || Sbjct 81123 ATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGGGCTGA 81064 Query 171574 TGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACTT 171633 | | | ||| | || || ||||| |||||||| ||||| ||| | ||||| |||||||| Sbjct 81063 TATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTT 81004 Query 171634 CCCACTAGACCTAGC 171648 ||| ||||||||||| Sbjct 81003 CCCTCTAGACCTAGC 80989 Score = 333 bits (368), Expect = 3e-86 Identities = 706/1051 (67%), Gaps = 26/1051 (2%) Strand=Plus/Plus Query 171785 AAGAGAATGGT---TTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCAT 171841 |||| |||| | |||| || | || || |||||| || || |||||||| || | Sbjct 89648 AAGAAAATGATCTATTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGT 89707 Query 171842 CGGATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGT 171901 |||||||| || || || || || ||||||||||| | || | || |||||||| Sbjct 89708 AGGATGGTCCGGCCTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTAC 89767 Query 171902 AGGAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGG 171961 ||| |||||||| || || || ||||| || ||||| | || || ||| | || || Sbjct 89768 AGGGACTACTTTTGTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGG 89827 Query 171962 AGCAAACTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATT 172021 || || ||||| || || || || || |||| || | | | || | | || Sbjct 89828 TTGCAATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTT 89887 Query 172022 GTTCCTATGGGGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACT 172081 | | |||||||| || || ||||| || ||| || || |||| |||||||||||| || Sbjct 89888 GCTACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCT 89947 Query 172082 ATGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTT 172141 |||| ||||| || | ||||| | |||| ||| |||||||||||| | | || || Sbjct 89948 GTGGACTTTTGTCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATT 90007 Query 172142 TGAGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTAT 172201 ||| |||| | |||| | || ||||| || ||| | ||||||| | || Sbjct 90008 TGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAAT 90067 Query 172202 TGCAGTATTCACGAGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGC 172261 ||||| || | | || || || |||||| | || || | |||||||||| || Sbjct 90068 CGCAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGC 90127 Query 172262 ACCTTCATTTGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAA 172321 || ||||| || ||||| || |||| | ||| | ||| | || || || || || Sbjct 90128 GCCGAGTTTTGGCGTAGCAGCTAT-ATTCGATTTATCCTTTTCTTCCAAGGATTTCATAA 90186 Query 172322 TATAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACT 172381 | || | || ||||||||||||||||| || || || || | || | ||| | || Sbjct 90187 TTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCT 90246 Query 172382 ATGTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACAC 172441 ||| || || ||||| || || || |||| ||| | ||| || || | Sbjct 90247 ATGCGCTATCCATGGGGCTACCGT--AGAAAACACTCTAT---------TC-GAAGATGG 90294 Query 172442 TGAAGGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAAC 172501 ||| ||| | | || ||| | || || | || || || | |||||||| Sbjct 90295 TGATGGT---------GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAAC 90345 Query 172502 TTATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAA 172561 |||| ||| | ||||||||| | || ||||| || || |||||| | || ||||| || Sbjct 90346 TTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAA 90405 Query 172562 CAAAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATC 172621 ||| | | ||||| ||| ||||| | || ||||| |||| ||| | |||| | Sbjct 90406 TAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGC 90465 Query 172622 TATAGGTATCGTAGGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGAT 172681 ||| || | || || || || || ||||| | || || ||||| || || || || || Sbjct 90466 TATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAAT 90525 Query 172682 AAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGA 172741 | ||||| ||||| || || ||||| || |||||||| || || |||||| | || || Sbjct 90526 CCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGA 90585 Query 172742 AGGTATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGA 172801 ||||| | || |||||| || || ||||| || ||||| || || | ||||| || Sbjct 90586 GGGTATTCGTGCGTGGATGGCAGCT-CAGATCAGCCTCATGAAAATCTTATATTCCCTGA 90644 Query 172802 AGAAGTCTTGCCACGAGGCAACGCACTATAA 172832 || || | ||||| || ||||| || ||| Sbjct 90645 GGAGGTTCTACCACGTGGAAACGCTCTTTAA 90675 >seq7 Length=35964315 Score = 275 bits (304), Expect = 7e-69 Identities = 332/452 (73%), Gaps = 0/452 (0%) Strand=Plus/Plus Query 171197 ATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCA 171256 ||||| || || || ||| ||||||||| ||| | ||||| ||| || |||||||| Sbjct 24459263 ATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCT 24459322 Query 171257 ATGCACGGTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAA 171316 ||||| ||||| | || || | | | | ||||| || || ||||| || ||| | Sbjct 24459323 ATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCT 24459382 Query 171317 AACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGA 171376 || | || || || || || |||||||||| | ||||||||||| ||||||||||| Sbjct 24459383 AATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCTCATGGT 24459442 Query 171377 TACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTC 171436 || || ||| ||||||||||||| ||||| |||||||||||| |||| ||||||||| Sbjct 24459443 TATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTACACTTC 24459502 Query 171437 TTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATG 171496 ||| | |||| | |||||||| | | ||||| || || | ||||| |||| ||| Sbjct 24459503 TTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATG 24459562 Query 171497 GCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATT 171556 ||||||||||| || || ||||| ||||||||||| || || ||| | || || Sbjct 24459563 GCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTT 24459622 Query 171557 GTACCAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAA 171616 | || |||| ||| | ||| | || || ||||| |||||||| ||||| ||| Sbjct 24459623 ATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAA 24459682 Query 171617 AGAAATGCACACAACTTCCCACTAGACCTAGC 171648 | ||||| ||||||||||| ||||||||||| Sbjct 24459683 CGTAATGCTCACAACTTCCCTCTAGACCTAGC 24459714 >seq4 Length=40407879 Score = 250 bits (276), Expect = 3e-61 Identities = 546/815 (67%), Gaps = 26/815 (3%) Strand=Plus/Plus Query 172020 TTGTTCCTATGGGGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGA 172079 ||| | |||||||| || || ||||| || ||| || || |||| |||||||||||| Sbjct 27919998 TTGCTACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGT 27920057 Query 172080 CTATGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAG 172139 || |||| |||||| || | ||||| | |||| ||| ||| |||||||| | | || Sbjct 27920058 CTGTGGA-CTTTGTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAA 27920116 Query 172140 TTTGAGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTT 172199 ||||| |||| | |||| | || ||||| || ||| | ||||||| ||| Sbjct 27920117 TTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCT--AGTC 27920174 Query 172200 --ATTGCAGTATTCACGAGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCT 172257 || ||||| || | | || || || |||||| | || || | ||||||||| Sbjct 27920175 CAATCGCAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCT 27920234 Query 172258 TCGCACCTTCATTTGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCC 172317 | || || ||||| || ||||| || ||||| | ||| | ||| | || || || | Sbjct 27920235 TTGCGCCGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTC 27920294 Query 172318 ACAATATAACTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCAT 172377 | ||| || | || ||||||||||||||||| || || | || | |||| ||| Sbjct 27920295 ATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTATTAGGTGTAGCTC 27920354 Query 172378 TACTATGTGCCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAAT 172437 | ||||| || || ||||| || || ||| | ||||| | | |||||| Sbjct 27920355 TGCTATGCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGA----------- 27920403 Query 172438 ACACTGAAGGTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAG 172497 || | | | | ||| | | ||||| | || || | || || || || |||| Sbjct 27920404 ----TG--GTGATGGTGCAA---ATACCTTTC-GCGCTTTTAACCCAACTCAAGATGAAG 27920453 Query 172498 AAACTTATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTT 172557 |||||||| ||| | | ||||||| | || ||||| || || |||||| | || |||| Sbjct 27920454 AAACTTATTCAATGGTCATTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTT 27920513 Query 172558 CAAACAAAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACAT 172617 | || ||| | ||||| ||| ||||| | || ||||| |||| || | |||| Sbjct 27920514 CCAATAAACATTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCAGTTTATGGATGA 27920573 Query 172618 CATCTATAGGTATCGTAGGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAG 172677 |||| || | || || | || || ||||| || || ||||| | || || | Sbjct 27920574 GTGCTATTGGCGTAGTTGGCTTGGCTCTGAACCTACATGCCTATGACTTCATTTCCCAGG 27920633 Query 172678 AGATAAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTA 172737 | || | ||||| ||||| || || ||||| || |||||||| || || |||||| | | Sbjct 27920634 AAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAA 27920693 Query 172738 ATGAAGGTATGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCC 172797 | | ||||| | || |||||| || || ||||| || ||||| || || | |||| Sbjct 27920694 ACCAGGGTATTTGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCC 27920753 Query 172798 CAGAAGAAGTCTTGCCACGAGGCAACGCACTATAA 172832 | || || || | ||| | || ||||| || ||| Sbjct 27920754 CTGAGGAGGTTCTACCATGTGGAAACGCTCTTTAA 27920788 >seq1 Length=42145699 Score = 123 bits (136), Expect = 3e-23 Identities = 176/245 (72%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 172494 GAAGAAACTTATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCA 172553 |||||||||||| ||| | | ||||||| | || ||||| || ||||||||| | || Sbjct 27067142 GAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGGTCTCAAATATTTGGTGTTGCT 27067201 Query 172554 TTTTCAAACAAAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGG 172613 ||||| || ||| | | ||||| ||| ||||| | || ||||| |||| | | | ||| Sbjct 27067202 TTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGAT-TATGG 27067260 Query 172614 ACATCATCTATAGGTATCGTAGGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCT 172673 | | |||| || | ||||| || || || ||||| | || || ||||| | || Sbjct 27067261 ATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTACGTGCCTATGACTTCATTTCC 27067320 Query 172674 CAAGAGATAAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTT 172733 || || || | ||||| ||||| || || ||| | || |||||||| || || |||||| Sbjct 27067321 CATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACTTTCTACACCAAAAATATTCTT 27067380 Query 172734 CTTAA 172738 |||| Sbjct 27067381 -TTAA 27067384 >seq8 Length=40689132 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 171260 CACGGTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAAC 171319 |||||||| | || || ||| | | ||||| || || ||||| || ||| | || Sbjct 1980306 CACGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAAT 1980247 Query 171320 TACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATAC 171379 | || || || || || |||||||||| || ||||||||||| |||||||| || || Sbjct 1980246 AAGGGTTACAAATTTGGTCAAGAAGAAGGGACTTATAACATTGTGGCTGCTCACGGTTAT 1980187 Query 171380 TTCGGTAGATTAATC 171394 || ||| |||||||| Sbjct 1980186 TTTGGTTGATTAATC 1980172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570266397742680