Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4 125 6e-24 seq7 114 1e-20 seq9 113 4e-20 seq5 105 5e-18 seq2 104 2e-17 seq1 104 2e-17 >seq4 Length=40407879 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||| || | ||| |||| || ||||| |||||||| || ||||||||||| ||| Sbjct 38277802 CCACCTCGGAGGCGCAGAACCAGGTGGAGCGTAGACTCCTTCTGAATGTTGTAGTCTGCC 38277743 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || ||| | || || ||||| |||||| || Sbjct 38277742 AAGGTGCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 38277683 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | | |||||| | | | | |||||| | ||| Sbjct 38277682 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCGGAAGACTCGACC 38277623 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || |||||||| || || ||||| |||||||| Sbjct 38277622 TCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCAT 38277576 Score = 114 bits (126), Expect = 1e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| |||||||||||||| |||| ||| | | ||| Sbjct 37851381 AGCACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAGTCAGCCAGGGTGCGGCCATCC 37851440 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| ||| | || || ||||| |||||| || | |||||| ||||| Sbjct 37851441 TCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 37851500 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| | |||| |||| |||||||| Sbjct 37851501 TGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGG 37851558 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || |||||||| |||||||| Sbjct 37851559 TCTTGCCAGTAAGAGTCTTGACAAAGATCTGCAT 37851592 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | || |||| || || ||||||||||| || ||||||||||| || Sbjct 37387866 CCCACCACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGC 37387807 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | | ||||||| || ||||| ||| | || || ||||| ||||| || Sbjct 37387806 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGG 37387747 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | |||||| ||||| || | | |||||| | | | | |||| || |||| Sbjct 37387746 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTGAGAGGACTCCAC 37387687 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || || || || || ||||| || |||||||| Sbjct 37387686 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 37387639 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| ||||||||||| || |||| ||| | | ||| Sbjct 37850925 AGCACCAGGTGGAGGGTGGACTCCTTCTGTATGTTGTAATCCGCCAAGGTGCGGCCATCC 37850984 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || ||||| || | || || ||||| ||||| || | |||||| || || Sbjct 37850985 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTATCC 37851044 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||| | |||| |||| ||||||||| Sbjct 37851045 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTC 37851104 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| |||||||| Sbjct 37851105 TTGCCAGTAAGAGTCTTGACAAAGATCTGCAT 37851136 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| |||||||||||||| || | ||| | | ||| Sbjct 37851837 AGCACCAGGTGGAGAGTGGACTCCTTCTGTATGTTGTAGTCAGCAAGGGTACGGCCATCC 37851896 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || || ||||| |||||| ||| | |||||| ||||| Sbjct 37851897 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 37851956 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| | ||| |||| ||||||| Sbjct 37851957 TGGATCTTGGC--CTTCACGTTGTCAATGGTGTCAGACGACTCAACCTCCAGAGTGATGG 37852014 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || || ||||| |||||||| Sbjct 37852015 TCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 37852048 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| || ||||||||||| | ||| | | ||||| | || Sbjct 37851162 TGAAGGGTCGACTCCTTTTGGATATTGTAGTCGGCAAGGGTACGGCCATCCTCAAGCTGC 37851221 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || || ||||| |||||| || | |||||| ||||| || || Sbjct 37851222 TTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 37851281 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | ||||| | |||| |||| ||||||||| || || | Sbjct 37851282 GC--CTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCAG 37851339 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||||||| |||||||| Sbjct 37851340 TAAGGGTCTTGACAAAGATCTGCAT 37851364 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| || ||||||||||| | ||| | | ||||| | || Sbjct 37851618 TGAAGGGTCGACTCCTTTTGGATATTGTAGTCGGCAAGGGTACGGCCATCCTCAAGCTGC 37851677 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || || ||||| |||||| || | |||||| ||||| || || Sbjct 37851678 TTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 37851737 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | ||||| | |||| |||| ||||||||| || || | Sbjct 37851738 GC--CTTCACGTTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCAG 37851795 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||||||| |||||||| Sbjct 37851796 TAAGAGTCTTGACAAAGATCTGCAT 37851820 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/221 (71%), Gaps = 5/221 (2%) Strand=Plus/Plus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 |||||||| |||| || || ||||||||||| || || ||||||||||| | ||| | Sbjct 37852059 AGCCTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGCAAGGGTCCGG 37852118 Query 16778 -GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTC 16836 | ||||| | || ||||| ||| | || || ||||| |||||| || | |||||| Sbjct 37852119 CCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTC 37852178 Query 16837 TTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACG 16894 ||||| || || || |||||| | | | | ||||| || ||| || | Sbjct 37852179 CTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATCGTGTCAGAGGACTCAACCTCAAGC 37852236 Query 16895 GTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||||| || || || || || || ||||| |||||||| Sbjct 37852237 GTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 37852277 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 |||||||| |||| ||| || || |||||||| || ||||||||||| || | ||| | Sbjct 31506268 AGCCTCAGGACCAAATGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGCTAACGTTCTC 31506209 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 | || |||||||| || || ||| |||| |||| || ||||| || | |||||| Sbjct 31506208 CCATCTTCCAATTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGGGGAATGCCCTCC 31506149 Query 16838 TTGTC 16842 ||||| Sbjct 31506148 TTGTC 31506144 >seq7 Length=35964315 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | ||||| ||||||||||| || |||||||| || || Sbjct 30598602 CCACCGCGGAGACGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCAGCA 30598543 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || ||||| || | ||||| |||||||||||| ||| Sbjct 30598542 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGTTGGTCCGGAGGG 30598483 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | | ||||| || ||| Sbjct 30598482 ATGCCCTCCTTGTCTTGGATCTTGGC--CTTCACATTGTCGATCGTGTCCGAGGACTCGA 30598425 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || || ||||| || || ||||| || ||||| Sbjct 30598424 CCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATTTGCAT 30598376 Score = 114 bits (126), Expect = 1e-20 Identities = 167/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | || |||| || |||||||||||||| || |||||||||||||| Sbjct 32238644 CCCACCGCGGAGGCGGAGCACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 32238585 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | ||||||| | || ||||| || | || |||||||| |||||| || Sbjct 32238584 GAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGG 32238525 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||| ||||| || || || |||||| | | | | ||||| || |||| Sbjct 32238524 GATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCCGAGGACTCC 32238467 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| |||||||| || || ||||| || || || || |||||||| ||| Sbjct 32238466 ACCTCCAACGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 32238413 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| | ||||||| | || Sbjct 30598806 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCGTCCTCAAGCTGC 30598747 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || || ||||| |||||| ||| | |||||| || || || || Sbjct 30598746 TTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTG 30598687 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | ||||| | ||| |||| ||||||||| || || | Sbjct 30598686 GC--CTTCACATTGTCAATGGTGTCAGACGACTCTACCTCCAGGGTGATGGTCTTGCCAG 30598629 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || ||||| |||||||| Sbjct 30598628 TGAGGGTCTTCACAAAGATCTGCAT 30598604 >seq9 Length=58970307 Score = 113 bits (124), Expect = 4e-20 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||||| |||||||| || |||||||||||||||| || ||||| Sbjct 15032475 AGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCTCGTCC 15032534 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || || ||||| | || || ||||| |||||| || | ||||| ||||| Sbjct 15032535 TCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCC 15032594 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | |||| ||||| | |||| |||| ||||| | Sbjct 15032595 TGGACCTTGGC--CTTCACGTTCGCCACCGTGTCCGACGCCTCCACCTCCAGCGTGATCG 15032652 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || |||||||| || ||||| |||||||| ||| Sbjct 15032653 TCTTGCCCGTCAGCGTCTTCACAAAGATCTGCATCTTG 15032690 >seq5 Length=47252588 Score = 105 bits (116), Expect = 5e-18 Identities = 165/234 (71%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| | || | || |||| |||||||| |||||||| || |||||||||||||| Sbjct 14113890 CCCTCCCCTGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 14113949 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | | ||||| | || ||||| || | || || ||||| |||||| || Sbjct 14113950 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 14114009 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||| ||||| || || || |||||| | | | | ||||| || |||| Sbjct 14114010 GATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCCGAGGACTCC 14114067 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| |||||||| || || ||||| || || || || |||||||| ||| Sbjct 14114068 ACCTCCAGTGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 14114121 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||| || | ||| | | ||| Sbjct 6910699 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCC 6910640 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || || ||||| |||||| || | |||||| ||||| Sbjct 6910639 TCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 6910580 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| || ||| || | ||||||| Sbjct 6910579 TGGATCTTGGC--CTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGAGTGATGG 6910522 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | || || || || || ||||| || ||||||||| Sbjct 6910521 TCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATT 6910487 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || |||| || || || |||||||| || ||||||||||| || Sbjct 6910258 CCTCCCCTGAGCCTGAGCACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCG 6910199 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || || || ||| | || |||| ||| |||||| || Sbjct 6910198 AGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 6910139 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || ||| || | | | | ||||| || ||| Sbjct 6910138 ATGCCTTCCTTGTCCTGGATCTTAGC--CTTGACGTTGTCAATGGTGTCCGAGGACTCGA 6910081 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||| || || |||||||| |||||||| Sbjct 6910080 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 6910032 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || || | || || ||||||||||| || ||||||||||| || | ||| | Sbjct 6910477 AGCCTGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGG 6910418 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 | ||||| | || ||||| ||| | || || ||||| |||||| || | |||||| Sbjct 6910417 CCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 6910358 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| | | | | ||||| || ||| || | | Sbjct 6910357 TTGTCCTGGATCTTGGC--CTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGCG 6910300 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || || || || || ||||| || |||||||| Sbjct 6910299 TGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 6910260 >seq2 Length=49199997 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||| |||| ||| | | ||| Sbjct 10740515 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCC 10740456 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || ||||| ||| | || || ||||| ||||| || | |||||| ||||| Sbjct 10740455 TCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 10740396 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||| || ||| || | |||||| || Sbjct 10740395 TGGATCTTCGCCTTCACATTGTCGATTGTGTCTGAGGACTCTACCTCAAGGGTGATAGTC 10740336 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || || |||||||||||||| Sbjct 10740335 TTGCCAGTGAGAGTCTTCACAAAAATCTGCAT 10740304 Score = 100 bits (110), Expect = 2e-16 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || || | || || || |||||||| || ||||||||||| || | ||| | Sbjct 10740065 AGCCTGAGCACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGG 10740006 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 | ||||||| || ||||| || | || || ||||| |||||| || | |||||| Sbjct 10740005 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCC 10739946 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| ||| | | ||||| || ||| || | | Sbjct 10739945 TTGTCCTGGATCTTGGC--CTTCACGTGGTCGATCGTGTCCGAGGACTCGACCTCAAGAG 10739888 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||||| || ||||| || || ||||| || ||||||||| Sbjct 10739887 TGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATT 10739847 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || |||||||||||||| |||||||| || || | ||| | | ||| Sbjct 10740287 AGCACCAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGGCCATCC 10740228 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || || ||||| |||||| || | |||||| ||||| Sbjct 10740227 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 10740168 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| || ||| || | ||||||| Sbjct 10740167 TGGATCTTGGC--CTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGAGTGATGG 10740110 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | || ||||| || || |||||||| ||||||||| Sbjct 10740109 TCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATT 10740075 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || |||| || || ||||||||||| || ||||||||||| || Sbjct 10739618 CCTCCCCTGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCG 10739559 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||| | || || || ||| | || |||| ||| |||||| || Sbjct 10739558 AGAGTGCGGCCATCCTCGAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGA 10739499 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || ||| || | | | | ||||| || ||| Sbjct 10739498 ATGCCTTCCTTGTCCTGGATCTTAGC--CTTGACGTTGTCAATGGTGTCCGAGGACTCAA 10739441 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||| || || || ||||| |||||||| Sbjct 10739440 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCAT 10739392 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||||||||||||||| || |||||||||||||||| ||| | |||| Sbjct 41013524 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCA 41013465 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCC 16822 |||| || || || || |||| |||||||| |||||| Sbjct 41013464 TCCAGCTGCTTCCCGGCGAAAATGAGCCGCTGCTGGTCC 41013426 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||||||||||||||| || ||| |||||||||||| || | ||||| Sbjct 41022426 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGCTGTAGTCGGCCAGCGTGCGGTCGTCC 41022367 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCC 16822 |||| || || ||||| | || |||||||| |||||| Sbjct 41022366 TCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGGTCC 41022328 >seq1 Length=42145699 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| | || | ||| || | ||| || ||||| |||||||| ||||| ||||| || Sbjct 35309238 CCCTCCCCTGAGACGCAGCACAAGATGAAGAGTGGATTCCTTTTGAATGTTATAGTCCGC 35309297 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || || | ||||||| || || || ||| | ||||||||||| ||||| || Sbjct 35309298 CAATGTGCGCCCATCCTCCAGCTGCTTCCCAGCAAAGATAAGCCGCTGCTGGTCTGGTGG 35309357 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||| ||||| || || || ||| || | | | | ||||| | ||| Sbjct 35309358 GATGCCCTCCTTGTCCTGGATCTTGGC--CTTAACATTGTCAATTGTGTCAGAGCTCTCA 35309415 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||||| ||||| || || || ||||||||||||||||| Sbjct 35309416 ACTTCAAGTGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAAATCTGCAT 35309465 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| || || ||||||||||| || ||||| || || || | ||| | | ||| Sbjct 7122926 AGTACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAATCCGCAAGGGTGCGGCCATCC 7122867 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || || ||||| |||||| || | |||||| ||||| Sbjct 7122866 TCCAGCTGCTTGCCAGCAAAGATTAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 7122807 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | |||||| | ||| |||| ||||||| Sbjct 7122806 TGGATCTTGGC--CTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGG 7122749 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||||| || || || || |||||||| Sbjct 7122748 TCTTGCCGGTCAATGTCTTCACGAATATCTGCAT 7122715 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || || |||||||| |||| ||| | | ||| Sbjct 7135618 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCCAGGGTGCGGCCATCC 7135559 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| ||| ||||| || | || || ||||| |||||| || | ||||| ||||| Sbjct 7135558 TCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 7135499 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | |||||| | ||| |||| ||||||| Sbjct 7135498 TGGATCTTGGC--CTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGG 7135441 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||||| || || || || |||||||| Sbjct 7135440 TCTTGCCGGTCAAAGTCTTCACGAATATCTGCAT 7135407 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||| |||||| || ||||||||||| |||| ||| | ||| Sbjct 7134250 AGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCC 7134191 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| ||| | || |||||||| || ||| || | ||| || ||||| Sbjct 7134190 TCAAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCC 7134131 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | ||||| | |||| || | |||||||| Sbjct 7134130 TGGATCTTGGC--CTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATGG 7134073 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || |||||||| |||||||| Sbjct 7134072 TCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 7134039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086336227630