Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4 127 2e-24 seq1 113 4e-20 seq7 100 2e-16 seq5 91.5 1e-13 seq6 82.4 7e-11 >seq4 Length=40407879 Score = 127 bits (140), Expect = 2e-24 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || || || || | ||||| | ||||| ||||| ||| Sbjct 38277120 ATGCAAATCTTTGTCAAGACCTTAACTGGCAAGACTATCACCCTTGAAGTCGAGTCCTCT 38277179 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || | || || | ||| ||||| ||||| || || || ||| Sbjct 38277180 GACACAATCGA--CAATGTCAAGGCGAAGATTCAG-GACAAGGAAGGCATCCCTCCGGAC 38277236 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || |||||| | || ||||| ||||| || | || |||| || || ||| |||||| Sbjct 38277237 CAGCAGCGGTTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACCTTGGCTGATTAC 38277296 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| || |||||||| || || | || || | || || ||||| Sbjct 38277297 AATATTCAGAAGGAATCCACTCTCCACCTCGTCCTCCGCCTCAGGGGAGG 38277346 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || || || ||||||| | || |||||||| ||| Sbjct 37851592 ATGCAGATCTTTGTCAAGACTCTTACTGGCAAGACCATCACCTTGGAGGTGGAGTCTTCT 37851533 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || || ||||| Sbjct 37851532 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 37851473 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || |||| ||||| ||| || ||||| Sbjct 37851472 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCTGACTACAAC 37851413 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || | ||||| Sbjct 37851412 ATACAGAAGGAGTCCACTCTCCACCTGGTGCT 37851381 Score = 105 bits (116), Expect = 6e-18 Identities = 161/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| | || || ||||| ||| Sbjct 37852277 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACGCTTGAGGTTGAGTCCTCT 37852218 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || || ||||| Sbjct 37852217 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 37852158 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGAT-GATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || | || ||| | || || | | ||| ||||| Sbjct 37852157 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGGCCGGACCCTTGCCGACTACAA 37852098 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || || ||||| || || | ||||| ||||| || || || Sbjct 37852097 TATCCAGAAGGAGTCCACCCTTCACCTGGTGCTGAGGCTCAGGGGTGG 37852050 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||| | ||||| || ||||||| | || || ||||||||| Sbjct 37852048 ATGCAGATATTTGTGAAGACCCTCACCGGCAAGACCATCACTCTGGAGGTTGAGTCGTCT 37851989 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||| || || ||||| || ||||| Sbjct 37851988 GACACCATTGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 37851929 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || ||||| || | || |||| || || | | || ||||| Sbjct 37851928 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCTGACTACAAC 37851869 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || | ||||| Sbjct 37851868 ATACAGAAGGAGTCCACTCTCCACCTGGTGCT 37851837 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| | || |||||||| ||| Sbjct 37387639 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGTCCTCT 37387698 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||| || || ||||| || ||| ||||| || || || || || ||||| Sbjct 37387699 CACACCATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 37387758 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || |||| ||||| ||| || ||||| Sbjct 37387759 CAGCGTCTCATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCAGACTACAAC 37387818 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || | ||||| Sbjct 37387819 ATCCAGAAGGAGTCCACCCTTCACCTGGTGCT 37387850 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || | || || | || || ||||| ||| Sbjct 38276892 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACTATTACTCTTGAGGTCGAGTCCTCT 38276951 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || | || || | ||| ||||| ||||| || || || ||| Sbjct 38276952 GACACGATTGA--CAATGTCAAGGCGAAGATTCAG-GACAAGGAAGGTATCCCTCCGGAC 38277008 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || |||||| | || ||||| || || || | || |||| || || ||| || ||| Sbjct 38277009 CAGCAGCGGTTGATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGTACCTTGGCTGACTAC 38277068 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 |||||||| || || || || || || Sbjct 38277069 AATATTCAGAAGGAGTCTACTCTTCA 38277094 >seq1 Length=42145699 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || ||||||| |||| |||||||| ||| Sbjct 7134039 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCT 7134098 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| ||||| ||||| || || || Sbjct 7134099 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCGGATCAG 7134158 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 |||||| | || ||||||||||| || | || |||| ||||| ||| || ||||| Sbjct 7134159 CAGCGGCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGGCGCACCCTGGCTGACTACAAC 7134218 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || ||| || || | ||||| | || || ||||| Sbjct 7134219 ATCCAGAAGGAGAGCACCCTCCACCTGGTGCTCCGTCTCAGGGGAGG 7134265 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| |||| |||||||| ||| Sbjct 7135179 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCT 7135238 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || || || ||||| Sbjct 7135239 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 7135298 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| ||||||||||| || | || |||| ||||| | | ||||||||| Sbjct 7135299 CAGCGTCTTATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCGGATTACAAT 7135358 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||| || ||| | ||||| Sbjct 7135359 ATCCAGAAGGAGAGCACCCTCCATCTGGTGCT 7135390 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| ||||| || |||||||||||||| || ||||||| | || || ||| || Sbjct 7135407 ATGCAGATATTCGTGAAGACTTTGACCGGCAAGACCATCACTTTGGAGGTTGAGAGCTCC 7135466 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| ||||| || || || || || ||||| Sbjct 7135467 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 7135526 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| ||| | || |||| ||||| ||| || |||||| Sbjct 7135527 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAGGATGGCCGCACCCTGGCGGACTACAAT 7135586 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || | ||||| Sbjct 7135587 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 7135618 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| | || || || | ||||| | ||||| ||| || Sbjct 35309694 AATGCAGATCTTTGTGAAGACACTTACTGGGAAGACTATCACGCTGGAAGTCGAGAGCTC 35309635 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||| || || ||||| ||| ||| ||||| || || || ||||| ||||| Sbjct 35309634 TGACACAATTGACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCACCGGACCA 35309575 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||| || || || | || || | ||||| ||| ||||||||| Sbjct 35309574 GCAGCGACTCATCTTTGCTGGAAAGCAGCTGGAGGACGGGCGCACATTGGCCGATTACAA 35309515 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || ||||| || || || || || || || | || ||||||| Sbjct 35309514 TATCCAGAAAGAGTCTACTCTTCACTTGGTCCTCCGCCTCCGAGGAGG 35309467 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| | || |||||||| ||| Sbjct 7122259 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCTTCT 7122318 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || || || ||||| Sbjct 7122319 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 7122378 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || |||| ||||| | | ||||||||| Sbjct 7122379 CAGCGTCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGGCGCACACTTGCTGATTACAAT 7122438 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || ||| || || | ||||| | || || ||||| Sbjct 7122439 ATCCAGAAGGAGAGCACCCTCCACCTGGTGCTTCGTCTCAGGGGAGG 7122485 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| | || |||||||| || Sbjct 7122487 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCTTCC 7122546 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || || || ||||| Sbjct 7122547 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 7122606 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| ||||| ||||| || | || |||| ||||| | | ||||||||| Sbjct 7122607 CAGCGTCTTATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCGGATTACAAT 7122666 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||| || ||| | ||||| Sbjct 7122667 ATCCAGAAGGAGAGCACCCTCCATCTGGTGCT 7122698 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| | || || ||| ||| Sbjct 7656120 ATGCAGATTTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAGAGTTCT 7656179 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || ||| ||||| || || || || || |||| Sbjct 7656180 GACACCATTGA--CAATGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACC 7656237 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || ||||| ||||| || | || |||| ||||| | | |||||||| Sbjct 7656238 AGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCCGATTACA 7656297 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| || || || || || || || | ||||| Sbjct 7656298 ATATCCAGAAGGAGTCTACTCTCCACCTGGTGCT 7656331 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| | || |||||||| || Sbjct 7121803 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACGATCACCCTTGAGGTGGAGTCTTCC 7121862 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || || || ||||| Sbjct 7121863 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAG 7121922 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || | || || | |||||| | | ||||||||| Sbjct 7121923 CAGAGGCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACGCTTGCTGATTACAAT 7121982 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || ||| || || | ||||| | || || ||||| Sbjct 7121983 ATCCAGAAGGAGAGCACCCTCCACCTGGTGCTCCGTCTCAGGGGAGG 7122029 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || |||| || | || || ||| || Sbjct 7134723 ATGCAGATCTTTGTGAAGACTTTGACTGGCAAGACCATTACTTTGGAGGTTGAGAGCTCC 7134782 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| ||||| || || || ||||| Sbjct 7134783 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAG 7134842 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || || |||||||| || | || || | ||||| ||| || || || Sbjct 7134843 CAGAGGCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGACGCACCCTGGCTGACTATAAC 7134902 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || ||| || || | ||||| | || || ||||| Sbjct 7134903 ATCCAGAAGGAGAGCACCCTCCACCTGGTGCTCCGTCTCAGGGGAGG 7134949 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| ||||| | || || || | || || | || || ||| || Sbjct 35309921 ATGCAGATATTTGTGAAGACCCTCACTGGGAAGACGATAACTCTTGAGGTTGAGAGCTCC 35309862 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || | ||||| | ||| ||||| || || || ||||||||| Sbjct 35309861 GACACCATTGA--CAATGTCAAGGCAAAGATTCAG-GACAAGGAGGGAATCCCACCTGAC 35309805 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || ||||| || || || | || |||| || || ||| || ||| Sbjct 35309804 CAGCAGAGGCTCATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACGCTGGCAGACTAC 35309745 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||| || || || || || || || || || || | || ||||||||| Sbjct 35309744 AATATCCAGAAGGAGTCTACTCTTCACTTGGTCCTTCGCCTTCGAGGAGGAA 35309693 >seq7 Length=35964315 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||| || || ||||||| | || || ||||| || Sbjct 30598376 ATGCAAATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCG 30598435 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || || |||||| Sbjct 30598436 GACACGATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAA 30598495 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || || ||||| || | || || | ||||| | | |||||||| Sbjct 30598496 CAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGATTACAAC 30598555 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 30598556 ATCCAGAAGGAGTCCACCCTGCA 30598578 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| | || || ||||||||| Sbjct 30598604 ATGCAGATCTTTGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTAGAGTCGTCT 30598663 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || ||||| || ||| || || || || || || || ||||| Sbjct 30598664 GACACCATTGACAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAG 30598723 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||||||||| || | || || | ||||| | | || ||||| Sbjct 30598724 CAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCGGACTACAAC 30598783 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || Sbjct 30598784 ATCCAGAAGGAGTCCACCCTCCA 30598806 >seq5 Length=47252588 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| | || || || ||||||| | || || ||||| || Sbjct 6910487 AATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTC 6910546 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| || ||| ||||| || || || || || ||||| Sbjct 6910547 AGACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 6910606 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || | || |||| ||||| | | || ||||| Sbjct 6910607 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCTGACTACAA 6910666 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || | ||||| Sbjct 6910667 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 6910699 >seq6 Length=36014550 Score = 82.4 bits (90), Expect = 7e-11 Identities = 133/191 (70%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||| || || | ||||| | || |||||||| || Sbjct 24825298 ATGCAAATTTTCGTGAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 24825357 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| | || | ||| || ||| ||||| || || || ||||| ||||| Sbjct 24825358 GACACCCTTGACAGCATCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAG 24825417 Query 25119 CAGCGGA---TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||| || | || ||||||||||| || | || || | ||||| | | |||||| Sbjct 24825418 CAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTGCTGATTAC 24825477 Query 25176 AATATTCAAAA 25186 || ||||| || Sbjct 24825478 AACATTCAGAA 24825488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326220240655