Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7 140 3e-28 seq4 129 6e-25 seq9 102 8e-17 seq2 98.7 1e-15 seq1 95.1 1e-14 seq5 89.7 5e-13 >seq7 Length=35964315 Score = 140 bits (154), Expect = 3e-28 Identities = 309/451 (69%), Gaps = 13/451 (3%) Strand=Plus/Minus Query 52392 GCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCC 52451 ||||||||| | || ||||||||| || |||||| | || || || ||| ||| | Sbjct 23911903 GCCGAGCGCCTCGTCGCCTTCGCCTGCGTTGAGGGCATCTTCTTCTCGGGCTCCTTCTGC 23911844 Query 52452 GCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTG 52511 |||||||| | | || | | ||| | ||||| ||||| || ||| ||||||| | Sbjct 23911843 GCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCGGGCCTCACCTTCTCCAACGAGCTC 23911784 Query 52512 ATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTG 52571 || || |||||||| || || ||| ||||| || |||||| |||| ||| | | | Sbjct 23911783 ATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTAC--GAC-CTCCT- 23911728 Query 52572 ACCGAA--AAATTGGATTCGGACACGATCCT-GAGCATGTTCAAGGAGGCGGTGGCTATC 52628 ||| | || | || || | ||| ||| || || || || || | ||| Sbjct 23911727 -CCGCAGCAAGCTCGACGAGGGCCGCGTCCGCGAG-ATCGTCGCCGACGCCGTCGACATC 23911670 Query 52629 GAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTC- 52687 || ||||| | | |||||| || |||| ||| | || ||||||| || | | Sbjct 23911669 GAGCGCGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGAATGAACG-GCGGGCT 23911611 Query 52688 CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAA 52747 |||| || ||||||||||||| || || || || ||| | || ||| ||||| | || Sbjct 23911610 CATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCATGGCGCTGGGGCACCAGAA 23911551 Query 52748 GTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGA 52806 | | ||||| |||| || || || || | ||| | ||| ||||| ||||||||| Sbjct 23911550 GATGTACAACG-TCGCCAACCCATTCGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGA 23911492 Query 52807 CCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||||| ||||||||||| ||||| ||||| Sbjct 23911491 CCAACTTCTTCGAGAAGCGCGTCGGGGAGTA 23911461 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | ||| | || | | | |||||||| || ||||||||||| Sbjct 30598830 CCACCACGCAGGCGGAGAACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCA 30598771 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || |||| | |||| || ||||| ||||||||||| Sbjct 30598770 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGG 30598711 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || || || ||| || || | |||| || | |||||| | |||||| || Sbjct 30598710 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTG-TCAATGGTGTCAGACGACTCTAC 30598652 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||| || || || ||||| |||||||| Sbjct 30598651 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 30598604 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 32238610 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 32238551 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 32238550 AAGATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 32238491 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | ||| | || || || ||||| || || Sbjct 32238490 TTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCTTCCCCGTCAGGGTCTTC 32238431 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 32238430 ACGAAGATCTGCAT 32238417 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| || | || | | | |||||||| || |||||||| || Sbjct 30598602 CCACCGCGGAGACGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCAGCA 30598543 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || || | |||| || ||||||||||||||||| Sbjct 30598542 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGTTGGTCCGGAGGG 30598483 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | ||||| | ||||| || Sbjct 30598482 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTG-TCGATCGTGTCCGAGGACTCGAC 30598424 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || |||||||| || || ||||| || ||||| Sbjct 30598423 CTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATTTGCAT 30598376 >seq4 Length=40407879 Score = 129 bits (142), Expect = 6e-25 Identities = 310/453 (68%), Gaps = 17/453 (4%) Strand=Plus/Minus Query 52392 GCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCC 52451 |||||||| | || || |||||| |||||||| | || || || ||| ||| | Sbjct 10866245 GCCGAGCGACTCGTCGCGTTCGCCTGCGTCGAGGGAATCTTCTTCTCGGGCTCCTTCTGC 10866186 Query 52452 GCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTG 52511 |||||||| | | || | | || | ||||| ||||| || ||| ||||||| | Sbjct 10866185 GCCATCTTCTGGCTCAAGAAGCGGGGGCTCATGCCGGGCCTCACCTTCTCCAACGAGCTC 10866126 Query 52512 ATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTG 52571 || || |||||||| || |||||| ||||| ||||||||| |||| ||| | | | Sbjct 10866125 ATCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCGTGCCTCCTCTAC--GAC-CTCCT- 10866070 Query 52572 ACCGAA--AAATTGGATTCG-GACACGA-TCCT-GAGCATGTTCAAGGAGGCGGTGGCTA 52626 ||| | || | || || | | || ||| ||| || || || || || | | Sbjct 10866069 -CCGCAGCAAGCTCGA--CGAGCCCCGCGTCCGCGAG-ATCGTCGCCGACGCCGTCGACA 10866014 Query 52627 TCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACG-CGCAG 52685 |||| |||||| | | |||||| || |||| ||| | |||||||||| ||| Sbjct 10866013 TCGAGCGAGAGTTTGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATGAACGGCGCGC 10865954 Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA 52745 | ||| || ||||||||||||| || || || || ||| | || |||||| || | Sbjct 10865953 TA-ATGAGCCAGTACATCGAGTTCGTCGCAGACCGCCTGCTCATGGCTCTCGGGT-GCAA 10865896 Query 52746 -AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAA 52804 ||| | |||||| ||| || ||||| | ||| | ||| ||||| ||||||| Sbjct 10865895 GAAGATGTACAACGCCGCCAACCCCTTTGACTGGATGGAGCTCATCTCGCTGCAGGGCAA 10865836 Query 52805 GACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| ||||| ||||||||||| |||||||| || Sbjct 10865835 GACAAACTTCTTCGAGAAGCGCGTCGGCGACTA 10865803 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | |||| ||| | || | | |||||||| |||||||||||||| Sbjct 38277803 GCCACCTCGGAGGCGCAGAACCAGGTGGAGCGTAGACTCCTTCTGAATGTTGTAGTCTGC 38277744 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||| || || ||||| | | |||| || ||||| |||||||| || Sbjct 38277743 CAAGGTGCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGCGG 38277684 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || || | |||| || | |||||||| ||||| | Sbjct 38277683 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTG-TCAATGGTGTCGGAAGACTCGA 38277625 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | || || || ||||| || || ||||| ||||||||| Sbjct 38277624 CCTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTCACAAAGATCTGCATG 38277575 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || ||||| || || || |||| | Sbjct 37851399 GACTCCTTCTGTATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCA 37851458 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 37851459 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 37851518 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | || | || || ||||| ||||| || Sbjct 37851519 TTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTG 37851578 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 37851579 ACAAAGATCTGCAT 37851592 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| || ||||||||| | ||||| ||||| || || || || | Sbjct 37851627 GACTCCTTTTGGATATTGTAGTCGGCAAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCG 37851686 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 37851687 AAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 37851746 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | || | || || ||||| ||||| || Sbjct 37851747 TTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTG 37851806 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 37851807 ACAAAGATCTGCAT 37851820 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||| |||||||| || ||||| ||||| || || || || | | Sbjct 38277085 GACTCCTTCTGAATATTGTAGTCAGCCAAGGTACGGCCATCCTCAAGCTGCTTCCCAGCA 38277026 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| | ||||| ||||||||||| |||||||| ||||| ||| | || | || Sbjct 38277025 AAGATCAACCGCTGCTGGTCCGGAGGGATACCTTCCTTGTC-CTGAATCTTCGCCTTGAC 38276967 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | ||||| | ||||| ||||| | || | || || ||||| || || | Sbjct 38276966 ATTG-TCAATCGTGTCAGAGGACTCGACCTCAAGAGTAATAGTCTTGCCAGTGAGGGTCT 38276908 Query 138599 TTACAAAAATCTGCATG 138615 | ||||| ||||||||| Sbjct 38276907 TGACAAAGATCTGCATG 38276891 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| || ||||||||| | ||||| ||||| || || || || | Sbjct 37851171 GACTCCTTTTGGATATTGTAGTCGGCAAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCG 37851230 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| |||||||| || || || || ||||| ||| || || | | Sbjct 37851231 AAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 37851290 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||||||||| | || | || || ||||| || || || Sbjct 37851291 TTG-TCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCAGTAAGGGTCTT 37851349 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 37851350 GACAAAGATCTGCAT 37851364 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||| ||||| | ||||| |||||||| || || || | Sbjct 37387604 GACTCCTTCTGGATGTTGCAGTCGGCAAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCG 37387545 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539 ||||||||||||| |||||||| || || || || ||||| ||| || ||| || Sbjct 37387544 AAGATTAGACGCTGCTGGTCCGG-GGGATGCCCTCCTTGTCCTGGATCTTAGCGTTCAAA 37387486 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||| ||||| | || | || || ||||| | || || Sbjct 37387485 TTG-TCGATGGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTGACGGTCTT 37387427 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 37387426 AACGAATATCTGCAT 37387412 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||||| ||||| || || || || | Sbjct 37851855 GACTCCTTCTGTATGTTGTAGTCAGCAAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCG 37851914 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| || || || ||||| ||| || || | Sbjct 37851915 AAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 37851974 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | |||||| ||||| | || | || || || || || || || Sbjct 37851975 TTGTCAATGGTGTCAGACGACTCAACCTCCAGAGTGATGGTCTTGCCGGTGAGGGTCTTC 37852034 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 37852035 ACAAATATCTGCAT 37852048 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || ||||| || || || |||| | Sbjct 37387832 GACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCA 37387773 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || || || ||||| ||| || || | Sbjct 37387772 AAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACG 37387713 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||||||||| | || | || || ||||| || || || Sbjct 37387712 TTGTCAATGGTGTGAGAGGACTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTG 37387653 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 37387652 ACGAAGATCTGCAT 37387639 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| || || || || ||||| || || || |||| Sbjct 37850943 GACTCCTTCTGTATGTTGTAATCCGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCG 37851002 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || || || || || ||| || || | Sbjct 37851003 AAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACG 37851062 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | || | || || ||||| ||||| || Sbjct 37851063 TTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTG 37851122 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 37851123 ACAAAGATCTGCAT 37851136 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||| ||||| | || ||| ||||||||| || || || | | Sbjct 38276857 GACTCCTTTTGGATGTTATAGTCAGCAAGTGTGCGCCCGTCCTCGAGCTGCTTGCCAGCA 38276798 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 38276797 AAGATCAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTGACA 38276738 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | || || | || || ||||||| || | || || || || || || || Sbjct 38276737 TTG-TCAATTGTATCCGAGGATTCAACCTCGAGGGTGATGGTCTTGCCTGTGAGTGTCTT 38276679 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 38276678 CACAAATATCTGCAT 38276664 >seq9 Length=58970307 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || ||| |||||| || || || || | Sbjct 15032493 GACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCTCGTCCTCCAGCTGCTTCCCCGCG 15032552 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| || || || | Sbjct 15032553 AAGATGAGGCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGACCTTGGCCTTCACG 15032612 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | |||| ||||| | || ||||||||| | ||| | ||| || || ||||| || || Sbjct 15032613 TTCGCCACCGTGTCCGACGCCTCCACCTCCAGCGTGATCGTCTTGCCCGTCAGCGTCTTC 15032672 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 15032673 ACAAAGATCTGCAT 15032686 >seq2 Length=49199997 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| ||| | || || ||||||||| || || |||| Sbjct 39557213 GACTCCTTCTGGATGTTGTAATCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCG 39557272 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || ||||| || ||||| ||| || || | Sbjct 39557273 AAGATGAGGCGCTGCTGGTCCGGCGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACG 39557332 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | ||||||||||| || | ||| || || ||||| || || Sbjct 39557333 TTGTCGATGGTGTCGCTGCTCTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGCGTCTTC 39557392 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 39557393 ACGAAGATCTGCAT 39557406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || ||||| || || || || | | Sbjct 10740497 GACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCA 10740438 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| ||||| || || || || || ||||| ||| || || | | Sbjct 10740437 AAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACA 10740378 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||| | || | || || ||||| ||||| || Sbjct 10740377 TTG-TCGATTGTGTCTGAGGACTCTACCTCAAGGGTGATAGTCTTGCCAGTGAGAGTCTT 10740319 Query 138600 TACAAAAATCTGCATG 138615 ||||||||||||||| Sbjct 10740318 CACAAAAATCTGCATG 10740303 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||| || |||||||| || || || | | Sbjct 10739585 GACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTCGAGCTGCTTTCCAGCA 10739526 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| |||||||| || || ||||| ||||| ||| || || | Sbjct 10739525 AAGATGAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGACG 10739466 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||| ||||||| || | || || || || || || || Sbjct 10739465 TTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTA 10739406 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 10739405 ACAAAGATCTGCAT 10739392 >seq1 Length=42145699 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||| || || ||| ||||| || || || |||| | | Sbjct 7134230 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGCCCATCCTCAAGCTGCTTGCCGGCAAA 7134171 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||| || ||||| || || ||||| ||||| ||| || || | | Sbjct 7134170 GATGAGCCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 7134111 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||| | ||||||||||||| || | || || || || || || || || Sbjct 7134110 GTCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 7134051 Query 138603 AAAAATCTGCAT 138614 ||| |||||||| Sbjct 7134050 AAAGATCTGCAT 7134039 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| ||| | || | | | |||||||| |||||||||||||| Sbjct 35310150 GCCACCCCTCAGACGCAGAACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGC 35310209 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||| || || || || | | |||| || | ||| |||||||| || Sbjct 35310210 AAGGGTGCGACCATCCTCTAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGG 35310269 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| || ||| | |||| || | |||||| | ||| | Sbjct 35310270 GATGCCCTCCTTGTCCTGGATCTTGGCTTTGACATTG-TCAATGGTGTCTGAACTCTCGA 35310328 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || |||||||| || || ||||| |||||||| Sbjct 35310329 CCTCAAGAGTGATGGTCTTGCCAGTCAGGGTCTTAACAAAGATCTGCAT 35310377 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || || ||||| || | || ||| |||||||| || || |||| | | Sbjct 7122450 CTCCTTCTGGATATTGTAATCAGCAAGTGTGCGCCCATCCTCGAGCTGCTTGCCGGCAAA 7122391 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| |||||||| |||||||| || || || || ||||| ||| || || | | Sbjct 7122390 GATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 7122331 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||| | ||||||||||| | || | || || ||||| || || || || Sbjct 7122330 GTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 7122271 Query 138603 AAAAATCTGCATGGCT 138618 || ||||||||| || Sbjct 7122270 GAAGATCTGCATGCCT 7122255 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||| ||||| || || || |||||| || || || || | | | Sbjct 7134686 CTCCTTCTGGATGTTATAGTCAGCCAGGGTGCGTCCGTCCTCAAGCTGCTTGCCAGCAAA 7134627 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || | ||| ||||| || || || || || ||||| ||| || || | | Sbjct 7134626 GATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 7134567 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| ||||||||||||| || | || || ||||| ||||| || || Sbjct 7134566 GTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGAGTCTTCAC 7134507 Query 138603 AAAAATCTGCATGGCT 138618 || ||||||||| || Sbjct 7134506 GAAGATCTGCATGCCT 7134491 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||||||||| || || || |||||| || || || || | | | Sbjct 7135142 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGTCCGTCCTCAAGCTGCTTGCCTGCAAA 7135083 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| || | ||| ||||| || || || || || ||||| ||| || || | ||| Sbjct 7135082 GATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 7135023 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | | |||||||| ||||||||||| | || | || || ||||| || || || | Sbjct 7135022 GT-CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCA 7134964 Query 138602 CAAAAATCTGCATGGCT 138618 | || ||||||||| || Sbjct 7134963 CGAAGATCTGCATGCCT 7134947 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || || ||||| || | || || ||||||||| || || |||| | | Sbjct 7121994 CTCCTTCTGGATATTGTAATCAGCAAGCGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAA 7121935 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || | ||| |||||||| || || || || ||||| ||| || || | | Sbjct 7121934 GATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 7121875 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| ||||||||||| | || | ||| || ||||| || || || || Sbjct 7121874 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTGCCAGTGAGGGTCTTAAC 7121815 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 7121814 GAAGATCTGCAT 7121803 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||| ||||| || || || ||||| || || || || | | | Sbjct 7134458 CTCCTTCTGGATGTTATAGTCAGCCAGGGTGCGTCCATCCTCAAGCTGCTTGCCCGCAAA 7134399 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || | ||| |||||||| || || || || ||||| ||| || || | | Sbjct 7134398 GATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 7134339 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| ||||||||||| | || | || || ||||||| || || || Sbjct 7134338 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 7134279 Query 138603 AAAAATCTGCATGGCT 138618 ||| ||||||||| || Sbjct 7134278 AAAGATCTGCATGCCT 7134263 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || || |||| | |||| |||||||| |||||||| || || || || ||| Sbjct 7135333 TCCTCCAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTG 7135274 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| || || | | || | |||||| | ||||||||||||| || | Sbjct 7135273 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATG 7135214 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || || ||||| || || || || || ||||||||| || Sbjct 7135213 GTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATGCCT 7135175 >seq5 Length=47252588 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || |||| Sbjct 14113924 GACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 14113983 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 14113984 AAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 14114043 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | || | || || || ||||| || || Sbjct 14114044 TTGTCGATGGTGTCCGAGGACTCCACCTCCAGTGTGATGGTCTTCCCCGTCAGGGTCTTC 14114103 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 14114104 ACGAAGATCTGCAT 14114117 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || |||||||| || || || | | Sbjct 6910225 GACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCA 6910166 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| |||||||| || || ||||| ||||| ||| || || | Sbjct 6910165 AAGATGAGCCTCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACG 6910106 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||| ||||||| || | || || || || || || || Sbjct 6910105 TTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTG 6910046 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 6910045 ACAAAGATCTGCAT 6910032 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||| || || || || | | Sbjct 6910453 GACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCA 6910394 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 6910393 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 6910334 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||| | ||| | || || ||||| || || || Sbjct 6910333 TTGTCGATCGTGTCTGAGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTGAGGGTCTTG 6910274 Query 138601 ACAAAAATCTGCATGGCT 138618 || || ||||||||| || Sbjct 6910273 ACGAAGATCTGCATGCCT 6910256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260309494640