Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq337 724 0.0 seq14 724 0.0 seq4 444 7e-120 seq7 374 1e-98 seq1 143 3e-29 seq8 87.8 2e-12 seq6 84.2 3e-11 >seq337 Length=135516 Score = 724 bits (802), Expect = 0.0 Identities = 755/988 (76%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 |||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 640 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 699 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 | ||||||||||| | || ||||| || || | || |||||||||| ||||| | Sbjct 700 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 759 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 || |||||||| ||||| || || |||||||||||||| || |||| ||| | |||||| Sbjct 760 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 819 Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773 ||||||||| || || || ||||| || || | ||||||||| | ||||| |||||||| Sbjct 820 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 879 Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833 ||| ||| ||||||||||| | |||||||| || ||||||||||| || ||||| || Sbjct 880 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 939 Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893 ||||||||||||||||| || || ||||| | || |||||| ||||||||||| Sbjct 940 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 999 Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953 | | || | ||||||||| | ||||||||||| |||||||| || ||||| || || Sbjct 1000 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 1059 Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013 |||||||| || || | |||||| || || ||||| |||||||||||||| || ||||| Sbjct 1060 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAA 1119 Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073 |||| ||| ||||||| |||||||| || || | ||||||| | ||||||||| || Sbjct 1120 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 1179 Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133 |||||| | |||||| | | ||| ||||||| || || ||||| ||||| || ||||| Sbjct 1180 TTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 1239 Query 8134 TACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193 ||| ||||| || |||||||| |||||| || ||||||||||||||||||||| || Sbjct 1240 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 1299 Query 8194 TGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAG 8253 | | ||| | | |||||| | | || || | ||||||| || ||||| | Sbjct 1300 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 1359 Query 8254 CCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGA 8313 ||| ||||||| ||| || |||||||| || || || || || | || || || ||| Sbjct 1360 CCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGA 1419 Query 8314 AGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGG 8373 || ||||| || ||||||||| || || ||||| ||||| | | ||||||| || || Sbjct 1420 AGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGG 1479 Query 8374 TTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAA 8432 ||||| || || ||||| || || ||||||||||||| ||| |||| || || || | Sbjct 1480 CTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGA 1539 Query 8433 TAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGAT 8492 || || | | | ||||| ||||||| ||||||||||| |||| || ||||| | Sbjct 1540 -AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGT 1598 Query 8493 TGTTGGTGGAGGTTACCCAGTTACAGAA 8520 | | |||| |||| |||||| ||||| Sbjct 1599 TTTCGGTGCTAGTTATCCAGTTGCAGAA 1626 Score = 536 bits (594), Expect = 1e-147 Identities = 731/1015 (72%), Gaps = 4/1015 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | ||| | || || ||||| |||| || |||||||| || |||||| Sbjct 10002 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 9943 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | ||||||||| ||||| | ||| || || || || || || ||||| ||||| ||| Sbjct 9942 TGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 9883 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || ||||| |||||||| || | ||| Sbjct 9882 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 9823 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || || |||| | ||||| | |||| | ||| | || || ||||| Sbjct 9822 TTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTACAAAT 9763 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 |||||||||||||||| |||||| |||||| || || | ||||||||| || ||||| Sbjct 9762 AGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 9703 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || || ||||| |||||||| ||||| || || || |||| || || | ||| || | Sbjct 9702 AAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCGCGG 9643 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| ||||||||||| || | ||| || ||||| ||||| || || ||| Sbjct 9642 AAGGTATTTGCACCATCACCATCTTCGAATAGAGTGTTTTCTACGGTAGCCCCATGGATA 9583 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 || || |||| ||| | ||||| | || || || |||||||||||||| ||||| | | Sbjct 9582 GCGCATAGCAGAGCTGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAAC 9523 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | ||| || | || || ||||| ||||| || ||||| Sbjct 9522 GTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATCGAAATATAGCTGCTACGCCAAAA 9463 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 ||||||||||||||||| || ||||| || ||||| || || || || || ||||| Sbjct 9462 CTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGAAACAAAA 9403 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 || || || |||||||| || | |||||||| || || || | | || ||| || || Sbjct 9402 ACTGCGATTGGACCAGAGAATGAAATTGCATTATAAGGCCGCA-ATTGAACAGACCGAGC 9344 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | ||||| || || | |||||||||||| || ||||| || || ||||| || ||||| Sbjct 9343 AAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCGACAAA 9284 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || ||| || || || | ||| ||| || ||||| ||||| ||||| || ||||| Sbjct 9283 AGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCGGGCCCCA 9224 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 ||| || | | || ||| | | | | |||||||| || || || || || | ||| Sbjct 9223 TAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGGTTAAGAA 9164 Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161 ||| || || || | ||| ||| ||| | || || || ||||| || || ||||| Sbjct 9163 ATTGCAACCTTCCAAATAGGAACTAGCCAATCCATGGGTATACCAAGAAGTTACAAAAGT 9104 Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221 || || || | |||||| || | || | |||||| ||| || || | || || || Sbjct 9103 AGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAATAGGCCGGA 9044 Query 7222 CCAACCAACAAAAACGAACCTATCAC-GCTTAAGCCAGTCATCGAGTACATCAAA 7275 ||| || ||||||||||| | || | | ||| |||||| || | | |||||| Sbjct 9043 CCATCCTACAAAAACGAAACGGTCCCTTCGTAA-CCAGTCGTCCATAATATCAAA 8990 >seq14 Length=147140 Score = 724 bits (802), Expect = 0.0 Identities = 755/988 (76%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 |||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 80985 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 81044 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 | ||||||||||| | || ||||| || || | || |||||||||| ||||| | Sbjct 81045 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 81104 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 || |||||||| ||||| || || |||||||||||||| || |||| ||| | |||||| Sbjct 81105 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 81164 Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773 ||||||||| || || || ||||| || || | ||||||||| | ||||| |||||||| Sbjct 81165 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 81224 Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833 ||| ||| ||||||||||| | |||||||| || ||||||||||| || ||||| || Sbjct 81225 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 81284 Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893 ||||||||||||||||| || || ||||| | || |||||| ||||||||||| Sbjct 81285 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 81344 Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953 | | || | ||||||||| | ||||||||||| |||||||| || ||||| || || Sbjct 81345 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 81404 Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013 |||||||| || || | |||||| || || ||||| |||||||||||||| || ||||| Sbjct 81405 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAA 81464 Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073 |||| ||| ||||||| |||||||| || || | ||||||| | ||||||||| || Sbjct 81465 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 81524 Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133 |||||| | |||||| | | ||| ||||||| || || ||||| ||||| || ||||| Sbjct 81525 TTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 81584 Query 8134 TACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193 ||| ||||| || |||||||| |||||| || ||||||||||||||||||||| || Sbjct 81585 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 81644 Query 8194 TGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAG 8253 | | ||| | | |||||| | | || || | ||||||| || ||||| | Sbjct 81645 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 81704 Query 8254 CCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGA 8313 ||| ||||||| ||| || |||||||| || || || || || | || || || ||| Sbjct 81705 CCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGA 81764 Query 8314 AGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGG 8373 || ||||| || ||||||||| || || ||||| ||||| | | ||||||| || || Sbjct 81765 AGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGG 81824 Query 8374 TTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAA 8432 ||||| || || ||||| || || ||||||||||||| ||| |||| || || || | Sbjct 81825 CTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGA 81884 Query 8433 TAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGAT 8492 || || | | | ||||| ||||||| ||||||||||| |||| || ||||| | Sbjct 81885 -AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGT 81943 Query 8493 TGTTGGTGGAGGTTACCCAGTTACAGAA 8520 | | |||| |||| |||||| ||||| Sbjct 81944 TTTCGGTGCTAGTTATCCAGTTGCAGAA 81971 Score = 524 bits (580), Expect = 9e-144 Identities = 706/978 (72%), Gaps = 4/978 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | ||| | || || ||||| |||| || |||||||| || ||||| Sbjct 90671 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCT 90612 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | ||||||||| ||||| | ||| || || || || || || ||||| ||||| ||| Sbjct 90611 GA-GCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 90553 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || ||||| |||||||| || | ||| Sbjct 90552 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 90493 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || || |||| | ||||| | |||| | ||| | || || ||||| Sbjct 90492 TTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTACAAAT 90433 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 |||||||||||||||| |||||| |||||| || || | ||||||||| || ||||| Sbjct 90432 AGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 90373 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || || ||||| |||||||| ||||| || || || |||| || || | ||| || | Sbjct 90372 AAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCGCGG 90313 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| ||||||||||| || | ||| || ||||| ||||| || || ||| Sbjct 90312 AAGGTATTTGCACCATCACCATCTTCGAATAGAGTGTTTTCTACGGTAGCCCCATGGATA 90253 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 || || |||| ||| | ||||| | || || || |||||||||||||| ||||| | | Sbjct 90252 GCGCATAGCAGAGCTGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAAC 90193 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | ||| || | || | |||||| ||||| || ||||| Sbjct 90192 GTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATC-GAATATAGCTGCTACGCCAAAA 90134 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 ||||||||||||||||| || ||||| || ||||| || || || || || ||||| Sbjct 90133 CTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGAAACAAAA 90074 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 || || || |||||||| || | |||||||| || || || | | || ||| || || Sbjct 90073 ACTGCGATTGGACCAGAGAATGAAATTGCATTATAAGGCCGCA-ATTGAACAGACCGAGC 90015 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | ||||| || || | |||||||||||| || ||||| || || ||||| || ||||| Sbjct 90014 AAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCGACAAA 89955 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || ||| || || || | ||| ||| || ||||| ||||| ||||| || ||||| Sbjct 89954 AGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCGGGCCCCA 89895 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 ||| || | | || ||| | | | | |||||||| || || || || || | ||| Sbjct 89894 TAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGGTTAAGAA 89835 Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161 ||| || || || | ||| ||| ||| | || || || ||||| || || ||||| Sbjct 89834 ATTGCAACCTTCCAAATAGGAACTAGCCAATCCATGGGTATACCAAGAAGTTACAAAAGT 89775 Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221 || || || | |||||| || | || | |||||| ||| || || | || || || Sbjct 89774 AGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAATAGGCCGGA 89715 Query 7222 CCAACCAACAAAAACGAA 7239 ||| || ||||||||||| Sbjct 89714 CCATCCTACAAAAACGAA 89697 >seq4 Length=40407879 Score = 444 bits (492), Expect = 7e-120 Identities = 611/850 (72%), Gaps = 3/850 (0%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | ||| | || || ||||| |||| || |||||||| || |||||| Sbjct 27920784 AGAGCGTTTCCACATGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 27920725 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | ||||||||| |||| | ||| | || || || || || ||||| ||||| ||| Sbjct 27920724 TGAGCTGCCATCCACGCACAAATACCCTGGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 27920665 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || |||| |||||||| || ||| Sbjct 27920664 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAATGAAGTCATAGGCATGTAGG 27920605 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || | |||| | ||||| | |||| | || | || || ||||| Sbjct 27920604 TTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACTGGTGACGGGTACAAAT 27920545 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 |||||||||||||||| |||| | |||||| || || | ||||||||| || ||||| Sbjct 27920544 AGCATAAAGAAATGTAACCAATGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 27920485 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || || ||||| ||||||| ||||| || || || ||||| || || | ||| || Sbjct 27920484 AAGCGGTTAGCAATGACCATTGAATAAGTTTCTTCATCTTGAGTTGGGTTAAAAGCGCGA 27920425 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| |||||||||||||| | ||| || ||||||||||| || || ||| Sbjct 27920424 AAGGTATTTGCACCATCACCATCTTCAAATAGAGTGTTTTCTACAGTAGCCCCATGGATA 27920365 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 || || |||| ||| ||||||| | | || || |||||||||||||| ||||| | | Sbjct 27920364 GCGCATAGCAGAGCTACACCTAATACTCTGGCAACTCCCATCATATGAAATGGGTTCAAC 27920305 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | ||| || | || || ||||| ||||| || ||||| Sbjct 27920304 GTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATCGAAATATAGCTGCTACGCCAAAA 27920245 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 ||||||||||||||||| || ||||| || ||||| || || || || || ||||| Sbjct 27920244 CTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGAAACAAAA 27920185 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 || || || |||| ||| || | |||||||| || || || | | || ||| || || Sbjct 27920184 ACTGCGATTGGACTAGAGAATGAAATTGCATTATAAGGCCGCA-ATTGAACAGACCGAGC 27920126 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | ||||| || || | |||||||| ||| || ||||| || || ||||| || || || Sbjct 27920125 AAGTTCAAATTGACGTAACATGAAACTTATTAGTGCAAAAGCCCCATGGAGAGCGAC-AA 27920067 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || ||| || || || | ||| ||| || ||||| ||||| ||||| || ||||| Sbjct 27920066 AGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCGGGCCCCA 27920007 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 ||| || | | || ||| | | | | |||||||| || || || || || | ||| Sbjct 27920006 TAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGGTTAAGAA 27919947 Query 7102 ATTACATCCC 7111 ||| || ||| Sbjct 27919946 ATTTCAACCC 27919937 >seq7 Length=35964315 Score = 374 bits (414), Expect = 1e-98 Identities = 359/460 (78%), Gaps = 0/460 (0%) Strand=Plus/Minus Query 7536 CAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAGAC 7595 |||| ||||| ||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct 24459716 CAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGAT 24459657 Query 7596 CAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGATGG 7655 |||||||||| | || ||||| || || | || |||||||||| ||||| | | Sbjct 24459656 TAGCACGGTTGGTGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAG 24459597 Query 7656 ACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTGA 7715 | |||||||| |||||||| || |||||||||||||| || |||| ||| | |||||||| Sbjct 24459596 ATTGGTTGAAATTGAAACCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGA 24459537 Query 7716 ACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGA 7775 ||||||| || || || ||||| || || | ||||||||| | |||| |||||||||| Sbjct 24459536 ACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAAGAGTTGTTGA 24459477 Query 7776 ACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGG 7835 | ||| ||||||||||| | |||||||| || || |||||||| || ||||| || Sbjct 24459476 AACTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAA 24459417 Query 7836 TCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCAC 7895 || ||||||||||||| || || ||||| | || |||||| ||||||||||| | Sbjct 24459416 TCCCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCC 24459357 Query 7896 GAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAGA 7955 | || | | ||||||| | ||||||||||| |||||||| || ||||| || || | Sbjct 24459356 TGATCAAACTATAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATA 24459297 Query 7956 CACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGAT 7995 ||||||| || || | |||||| || || ||||| | ||| Sbjct 24459296 CACCAGCTACACCTAACATGTGAAATGGATGCATAATGAT 24459257 >seq1 Length=42145699 Score = 143 bits (158), Expect = 3e-29 Identities = 194/269 (72%), Gaps = 1/269 (0%) Strand=Plus/Minus Query 6350 TCATTCAATAGGATGTTCTTGGTATAGAACGTCTCGAACTCTGGATCCTCCGCTGCTCTG 6409 || || || || || || ||||| ||||| |||| || || ||||| |||||||| | | Sbjct 27067388 TCGTTTAAAAGAATATTTTTGGTGTAGAAAGTCTAAAATTCAGGATCTTCCGCTGCACGG 27067329 Query 6410 ATCTCTTGTGAAACAAAGTCATAAGCTCTAAGGTTAAGTGCAAGACCAATAATACCAATG 6469 || || || |||| |||||||| || | ||||| || || || || | | ||||| Sbjct 27067328 ATTTCATGGGAAATGAAGTCATAGGCACGTAGGTTCAGAGCCAGGCCTACTACGCCAATA 27067269 Query 6470 CTAGAGGTCCAAAGACCCATAACAGGAACAAACAGCATAAAGAAATGTAGCCAACGCTTA 6529 || |||| | | | | || || ||||| |||||||||||||||| ||||| ||| Sbjct 27067268 GCAGTCATCCATA-ATCGGTGACGGGTACAAATAGCATAAAGAAATGTAACCAACATTTA 27067210 Query 6530 TTGCTGAAGGCGATACCAAAGATCTGAGACCAGAAACGATTAGCCGTGACCATCGAATAG 6589 ||| || || | |||||| || |||||||| || || ||||| ||||||| ||||| Sbjct 27067209 TTGGAAAAAGCAACACCAAATATTTGAGACCACAAGCGGTTAGCAATGACCATTGAATAA 27067150 Query 6590 GTCTCCTCTTCTTGTGTAGGCTCAAACGC 6618 || || || |||| || || | ||| || Sbjct 27067149 GTTTCTTCAGCTTGAGTTGGGTTAAAAGC 27067121 >seq8 Length=40689132 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 7801 ACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATA 7860 |||||| || ||||||||||| || ||||| || ||| ||||||||||||| || || || Sbjct 1980181 ACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTCCCTTCTTCTTGACCAAATTTGTA 1980240 Query 7861 ACCATAGTTCTGGGACTCAGACTCAGTGGTTTCACGAACCAGAGAAGAGGTTACAAGCGA 7920 ||| | || |||||| ||||||||||| | | || | ||||||||| | || Sbjct 1980241 ACCCTTATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGA 1980300 Query 7921 ACCATG 7926 ||| || Sbjct 1980301 ACCGTG 1980306 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 7801 ACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATA 7860 |||||| || ||||||||||| || ||||| || ||| ||||||||||||| || || || Sbjct 30663629 ACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTCCCTTCTTCTTGACCTAATTTGTA 30663688 Query 7861 ACCATAGTTCTGGGACTCAGACTCAGTGGTTTCACGAACCAGAGAAGAGGTTACAAGCGA 7920 ||| | || |||||| ||| ||||||| | | || | ||||||||| | || Sbjct 30663689 ACCCTTATTAGCAGACTCATTTTCACTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGA 30663748 Query 7921 ACCATG 7926 ||| || Sbjct 30663749 ACCGTG 30663754 >seq6 Length=36014550 Score = 84.2 bits (92), Expect = 3e-11 Identities = 140/201 (70%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 |||||| || || |||| |||||||||||| |||| |||||||| |||||| | || || Sbjct 25018129 AGCAGCTAGTTCTAGAGCGAAGTTGTGAGCCTTACCGTCGTGCATTACTTCC-TACCGAG 25018187 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 | ||| ||||||| || ||| |||| || | || ||||||| || || || | Sbjct 25018188 ATTAGCCCGGTTGATGGTATCAGCCGAGGTCTTAATAACGCGACCTTTACTATGAACTAC 25018247 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 | ||| |||| ||| | ||| | | || ||||| | |||| ||| | ||||| Sbjct 25018248 ATATTGGATGAAATTGGAGGCGTCCACGACGACTGCCAGAGGACTAATACCTAACGCAGT 25018307 Query 7714 GAACCAGATGCCAACAACTGG 7734 || || || || || || || Sbjct 25018308 GACCCTTATCCCTACTACAGG 25018328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622122179299280