Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq337 499 3e-136 seq14 499 3e-136 seq4 246 4e-60 seq7 233 2e-56 seq1 113 5e-20 >seq337 Length=135516 Score = 499 bits (552), Expect = 3e-136 Identities = 675/941 (72%), Gaps = 0/941 (0%) Strand=Plus/Minus Query 169444 GGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGTTTCATCGTT 169503 || ||||| |||||| | ||||| || |||| | || ||| | | || || | Sbjct 1584 GGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATC 1525 Query 169504 GCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGTTCT 169563 || ||||| || || ||||| || ||||| || || || | || || || | |||||| Sbjct 1524 GCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCT 1465 Query 169564 TTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATCGGA 169623 || | ||||| ||||| || || |||||||| || |||| | || || |||||| Sbjct 1464 TTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGA 1405 Query 169624 CTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGTGGT 169683 | || || |||||||| |||||||| ||| |||||||||||||||| || ||||| ||| Sbjct 1404 TTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGT 1345 Query 169684 CCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAG 169743 |||||| || | | | | |||||| | ||||| | | || ||||| | || Sbjct 1344 CCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAG 1285 Query 169744 TGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 169803 |||||||| | | | | || ||||| |||||||| ||||||||| || || || Sbjct 1284 TGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCT 1225 Query 169804 GTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCTGAT 169863 || | ||||| ||||| ||||| | || || ||||||| || ||||||||| Sbjct 1224 GTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGAT 1165 Query 169864 GGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAGCAT 169923 |||||||| |||| || || |||||||||||||||||| | || ||||| || ||||| Sbjct 1164 GGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCAC 1105 Query 169924 AACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCTTTA 169983 ||||| || |||||||| || |||||| ||| ||||| || | ||||| || || || Sbjct 1104 AACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTA 1045 Query 169984 TTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAGCAA 170043 ||| || ||||||||||| | || || || | | ||||| ||||| || || | Sbjct 1044 TTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAAT 985 Query 170044 GAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCA 170103 ||||| || | ||||| || || || ||||||||||| || || ||||| || || Sbjct 984 GAGTCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCT 925 Query 170104 GCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 170163 || |||||||| |||||||| | |||||||| |||||| ||||||||||| | | Sbjct 924 GCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCT 865 Query 170164 CTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATC 170223 ||||||||||| | || | || ||||| ||| | | ||||| || || | ||||| Sbjct 864 TTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATT 805 Query 170224 TGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCTAAC 170283 | || |||||||||||| | ||||| ||||| || |||||||| || |||||| | | Sbjct 804 AGTACTATGGCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAA 745 Query 170284 GGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGTT 170343 || | | || |||| |||| | | ||| | || || | ||||||||||| Sbjct 744 GGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTA 685 Query 170344 ATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 170384 ||||| ||| | ||||| ||||||||||| ||||||||||| Sbjct 684 ATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 644 Score = 369 bits (408), Expect = 4e-97 Identities = 712/1047 (68%), Gaps = 39/1047 (4%) Strand=Plus/Plus Query 170529 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGT 170588 |||||| || | |||||||||||| || || ||||| || || |||||||||| || Sbjct 8990 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 9049 Query 170589 CTTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTC 170648 || || || | |||||||| || | | | || |||||||| ||||||||| || Sbjct 9050 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 9109 Query 170649 GTTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTA 170708 || || || |||||||| ||||| | ||| || ||| | || || || || ||| || Sbjct 9110 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTA 9169 Query 170709 ACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTT 170763 || || || |||||||| |||| |||| | | || | |||| || | || | Sbjct 9170 ACCGCGGCGGTTTCCACTCCTG-----CCAATAGTTTAGCACACTCTTTGTTGCTACTAT 9224 Query 170764 GGGGACCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAACT 170823 |||| || |||||||| || ||| |||||||| ||| | || ||| | |||| | Sbjct 9225 GGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTT 9284 Query 170824 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATCG 170883 |||| || | ||||| | |||| ||| |||||||||||| | | |||||||| | | Sbjct 9285 TTGTCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTG 9344 Query 170884 CAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCT 170943 | | ||| | | ||||| || ||| | ||||||||| | |||||||| | Sbjct 9345 CTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTT 9404 Query 170944 TCACTAGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCAT 171003 | | | | || || || |||||||| || || |||||||||| || || | Sbjct 9405 TTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTT 9464 Query 171004 TCGGTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACAT 171063 | || || ||||| || ||||| | |||| | ||| | ||||| || || || || | Sbjct 9465 TTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGT 9524 Query 171064 TGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCA 171123 |||| |||||||| |||||||| ||||| ||| || |||| | ||| | |||| || | Sbjct 9525 TGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTA 9584 Query 171124 TTCATGGTGCAACAGTGCAGAACACATTGTAT--GAAGACACATCAGTTTATACTGATAA 171181 | ||||| || || || |||| ||| | ||| |||| || |||| Sbjct 9585 TCCATGGGGCTACCGT--AGAAAACACTCTATTCGAAG------------ATGGTGAT-- 9628 Query 171182 TAAAATTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAG 171241 | |||| || ||||| || ||| | || || || | ||||||||||| Sbjct 9629 ---GGTGCAAA----TACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTC 9681 Query 171242 TATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAG 171301 ||| | || || ||| | || ||||| || || |||||| ||||||| || || ||| | Sbjct 9682 AATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACG 9741 Query 171302 ATTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGG 171361 | ||||| ||| ||||| | || || || |||| ||| | |||| |||| || Sbjct 9742 TTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGG 9801 Query 171362 TATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGC 171421 | || || || || || ||||| | || || || || || || || || || | || Sbjct 9802 CGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGC 9861 Query 171422 AGCAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTAT 171481 ||| ||||| || || || |||||||||||||| || ||||| ||| | || || ||||| Sbjct 9862 AGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTAT 9921 Query 171482 GAGAGCATGGATGTCA--TCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAA 171539 | || |||||| || |||| || || || ||||| || | ||||||| || || Sbjct 9922 TCGTGCGTGGATGGCAGCTCAG--GATCAGCCTCATGAAAATCTTATATTCCCTGAGGAG 9979 Query 171540 GTGTTACCAAGAGGTAACGCACTTTAA 171566 || ||||| | || ||||| |||||| Sbjct 9980 GTTCTACCACGTGGAAACGCTCTTTAA 10006 >seq14 Length=147140 Score = 499 bits (552), Expect = 3e-136 Identities = 675/941 (72%), Gaps = 0/941 (0%) Strand=Plus/Minus Query 169444 GGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGTTTCATCGTT 169503 || ||||| |||||| | ||||| || |||| | || ||| | | || || | Sbjct 81929 GGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATC 81870 Query 169504 GCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGTTCT 169563 || ||||| || || ||||| || ||||| || || || | || || || | |||||| Sbjct 81869 GCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCT 81810 Query 169564 TTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATCGGA 169623 || | ||||| ||||| || || |||||||| || |||| | || || |||||| Sbjct 81809 TTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGA 81750 Query 169624 CTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGTGGT 169683 | || || |||||||| |||||||| ||| |||||||||||||||| || ||||| ||| Sbjct 81749 TTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGT 81690 Query 169684 CCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAG 169743 |||||| || | | | | |||||| | ||||| | | || ||||| | || Sbjct 81689 CCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAG 81630 Query 169744 TGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCA 169803 |||||||| | | | | || ||||| |||||||| ||||||||| || || || Sbjct 81629 TGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCT 81570 Query 169804 GTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCTGAT 169863 || | ||||| ||||| ||||| | || || ||||||| || ||||||||| Sbjct 81569 GTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGAT 81510 Query 169864 GGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAGCAT 169923 |||||||| |||| || || |||||||||||||||||| | || ||||| || ||||| Sbjct 81509 GGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCAC 81450 Query 169924 AACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCTTTA 169983 ||||| || |||||||| || |||||| ||| ||||| || | ||||| || || || Sbjct 81449 AACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTA 81390 Query 169984 TTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAGCAA 170043 ||| || ||||||||||| | || || || | | ||||| ||||| || || | Sbjct 81389 TTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAAT 81330 Query 170044 GAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCA 170103 ||||| || | ||||| || || || ||||||||||| || || ||||| || || Sbjct 81329 GAGTCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCT 81270 Query 170104 GCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 170163 || |||||||| |||||||| | |||||||| |||||| ||||||||||| | | Sbjct 81269 GCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCT 81210 Query 170164 CTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATC 170223 ||||||||||| | || | || ||||| ||| | | ||||| || || | ||||| Sbjct 81209 TTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATT 81150 Query 170224 TGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCTAAC 170283 | || |||||||||||| | ||||| ||||| || |||||||| || |||||| | | Sbjct 81149 AGTACTATGGCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAA 81090 Query 170284 GGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGTT 170343 || | | || |||| |||| | | ||| | || || | ||||||||||| Sbjct 81089 GGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTA 81030 Query 170344 ATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 170384 ||||| ||| | ||||| ||||||||||| ||||||||||| Sbjct 81029 ATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 80989 Score = 354 bits (392), Expect = 9e-93 Identities = 709/1046 (68%), Gaps = 41/1046 (4%) Strand=Plus/Plus Query 170530 TTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTTGTATTCATAGGATGGTCTGGTC 170589 ||||| || | |||||||||||| || || ||||| || || |||||||||| || | Sbjct 89662 TTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCC 89721 Query 170590 TTTTACTTCTGCCTTGTGCATACCTATCAATCGGTGGTTGGTTCTTAGGGACTACCTTCG 170649 | || || | |||||||| || | | | || |||||||| ||||||||| || | Sbjct 89722 TATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTG 89781 Query 170650 TTACATCATGGTATACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTAA 170709 | || || |||||||| ||||| | ||| || ||| | || || || || ||| ||| Sbjct 89782 TAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAA 89841 Query 170710 CAGCAGCAGTTTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTTG 170764 | || || |||||||| |||| |||| | | || | |||| || | || || Sbjct 89842 CCGCGGCGGTTTCCACTCCTG-----CCAATAGTTTAGCACACTCTTTGTTGCTACTATG 89896 Query 170765 GGGACCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAACTT 170824 ||| || |||||||| || ||| |||||||| ||| | || ||| | |||| || Sbjct 89897 GGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTT 89956 Query 170825 TGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATCGC 170884 ||| || | ||||| | |||| ||| |||||||||||| | | |||||||| | || Sbjct 89957 TGTCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 90016 Query 170885 AGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTT 170944 | ||| | | ||||| || ||| | ||||||||| | |||||||| || Sbjct 90017 TCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTT 90076 Query 170945 CACTAGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCATT 171004 | | | || || || |||||||| || || |||||||||| || || || Sbjct 90077 TGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTT 90136 Query 171005 CGGTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATT 171064 || || ||||| | | |||| | |||| | ||| | ||||| || || || || || Sbjct 90137 TGGCGTAGCAGCTA-TATTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTT 90195 Query 171065 GAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCAT 171124 ||| |||||||| |||||||| ||||| ||| || |||| | ||| | |||| || || Sbjct 90196 GAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTAT 90255 Query 171125 TCATGGTGCAACAGTGCAGAACACATTGTAT--GAAGACACATCAGTTTATACTGATAAT 171182 ||||| || || || |||| ||| | ||| |||| || |||| Sbjct 90256 CCATGGGGCTACCGT--AGAAAACACTCTATTCGAAG------------ATGGTGAT--- 90298 Query 171183 AAAATTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAGT 171242 | |||| || ||||| || ||| | || || || | ||||||||||| Sbjct 90299 --GGTGCAAA----TACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCA 90352 Query 171243 ATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGA 171302 ||| | || || ||| | || ||||| || || |||||| ||||||| || || ||| | Sbjct 90353 ATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGT 90412 Query 171303 TTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGT 171362 | ||||| ||| ||||| | || || || |||| ||| | |||| |||| || Sbjct 90413 TGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGC 90472 Query 171363 ATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCA 171422 | || || || || || ||||| | || || || || || || || || || | ||| Sbjct 90473 GTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCA 90532 Query 171423 GCAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATG 171482 || ||||| || || || |||||||||||||| || ||||| ||| | || || ||||| Sbjct 90533 GCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATT 90592 Query 171483 AGAGCATGGATGTCA--TCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAG 171540 | || |||||| || ||| || || || ||||| || | ||||||| || || | Sbjct 90593 CGTGCGTGGATGGCAGCTCA---GATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGG 90649 Query 171541 TGTTACCAAGAGGTAACGCACTTTAA 171566 | ||||| | || ||||| |||||| Sbjct 90650 TTCTACCACGTGGAAACGCTCTTTAA 90675 >seq4 Length=40407879 Score = 246 bits (272), Expect = 4e-60 Identities = 584/881 (66%), Gaps = 36/881 (4%) Strand=Plus/Plus Query 170693 GGGATGTAACTTCCTAACAGCAGCAGTTTCCACACCTGGCGACGCAATGGGT---CATAG 170749 ||| || || ||| |||| || || |||||||| |||| | ||| | | || | Sbjct 27919937 GGGTTGAAATTTCTTAACCGCGGCGGTTTCCACTCCTGCC-----AATAGTTTAGCACAC 27919991 Query 170750 TCTTC--TGTTCCTTTGGGGACCTGAAGCACAAGGTTCATTTGTTCGTTGGTTACAACTC 170807 |||| || | || ||||| || |||||||| || ||| |||||||| ||| | Sbjct 27919992 TCTTTGTTGCTACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTA 27920051 Query 170808 GGAGGTTTATGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTC 170867 || ||| | |||| |||||| || | ||||| | |||| ||| ||| |||||||| | Sbjct 27920052 GGTGGTCTGTGGA-CTTTGTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTA 27920110 Query 170868 AGACAATTTGAGATCGCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCT 170927 | |||||||| | || | ||| | | ||||| || ||| | |||||||| Sbjct 27920111 CGTCAATTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCT 27920170 Query 170928 GCTGTTATCGCAGTCTTCACTAGCATCTTTCTGATCTATCCACTAGGTCAGCACAGTTGG 170987 | |||||||| || | | | || || || |||||||| || || ||||| Sbjct 27920171 AGTCCAATCGCAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGG 27920230 Query 170988 TTCTTCGCACCATCATTCGGTGTCGCAGCAATTTTTCGTTATATCTTATTCATACAAGGT 171047 ||||| || || || || || ||||| || ||||| | |||| | ||| | ||||| Sbjct 27920231 TTCTTTGCGCCGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGA 27920290 Query 171048 TTCCACAACATTACATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGA 171107 || || || || ||||| |||||||| |||||||| ||||| || || |||||| | Sbjct 27920291 TTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTATTAGGTGTA 27920350 Query 171108 GCATTATTATGTGCCATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCA 171167 || | |||| || || ||||| || || || | ||||| | | |||||| Sbjct 27920351 GCTCTGCTATGCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGAT------ 27920404 Query 171168 GTTTATACTGATAATAAAATTCAAAGCACAACATTCCGTGCCTTTGATCCTACACAGGAA 171227 | | || || |||| | || || || ||| | || || || || Sbjct 27920405 GGTGATGGTGCAAATA---------------CCTTTCGCGCTTTTAACCCAACTCAAGAT 27920449 Query 171228 GAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGCT 171287 ||||||||||| ||| | | || ||| | || ||||| || || |||||| ||||| Sbjct 27920450 GAAGAAACTTATTCAATGGTCATTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCT 27920509 Query 171288 TTCTCTAACAAAAGATTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGG 171347 || || || ||| | ||||| ||| ||||| | || || || |||| || | ||| Sbjct 27920510 TTTTCCAATAAACATTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCAGTTTATGG 27920569 Query 171348 ACATCATCTATAGGTATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATCT 171407 | |||| || | || || | || || ||||| || || || || | || Sbjct 27920570 ATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTGAACCTACATGCCTATGACTTCATTTCC 27920629 Query 171408 CAAGAGATAAGAGCAGCAGAAGACCCAGAGTTCGAGACTTTCTACACTAAGAATATACTT 171467 || || || | ||||| ||||| || || || |||||||||||||| || ||||| ||| Sbjct 27920630 CAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTT 27920689 Query 171468 CTTAATGAAGGTATGAGAGCATGGATGTCA--TCAGTTGACCAACCACATGAGAACTTCG 171525 | || | ||||| | || |||||| || |||| || || || ||||| || | Sbjct 27920690 TTAAACCAGGGTATTTGTGCGTGGATGGCAGCTCAG--GATCAGCCTCATGAAAATCTTA 27920747 Query 171526 TATTCCCAGAAGAAGTGTTACCAAGAGGTAACGCACTTTAA 171566 ||||||| || || || ||||| | || ||||| |||||| Sbjct 27920748 TATTCCCTGAGGAGGTTCTACCATGTGGAAACGCTCTTTAA 27920788 >seq7 Length=35964315 Score = 233 bits (258), Expect = 2e-56 Identities = 323/452 (71%), Gaps = 0/452 (0%) Strand=Plus/Plus Query 169933 ATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCTTTATTCTCAGCA 169992 |||||||| || |||||| ||| ||||| || | ||||| || || ||||| || Sbjct 24459263 ATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCT 24459322 Query 169993 ATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAGCAAGAGTCACAG 170052 ||||||||||| | || || | | | ||||| ||||| || || | ||||| Sbjct 24459323 ATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCT 24459382 Query 170053 AACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGT 170112 || | ||||| || || || |||||||||| | || ||||| || || || || ||| Sbjct 24459383 AATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCTCATGGT 24459442 Query 170113 TACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTCTACACTTC 170172 || |||||||| | |||||||| |||||| ||||||||||| | | |||||||| Sbjct 24459443 TATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTACACTTC 24459502 Query 170173 TTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGCACAATG 170232 ||| | || | || ||||| ||| | | ||||| || || | ||||| | || ||| Sbjct 24459503 TTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATG 24459562 Query 170233 GCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCTAACGGAAAAATC 170292 ||||||||| | ||||||||||| || |||||||| || |||||| | | || | Sbjct 24459563 GCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTT 24459622 Query 170293 GTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGTTATGCATGAA 170352 | || |||| |||| | ||| | || || | ||||||||||| ||||| ||| Sbjct 24459623 ATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAA 24459682 Query 170353 AGAAATGCACACAACTTCCCACTAGACCTAGC 170384 | ||||| ||||||||||| ||||||||||| Sbjct 24459683 CGTAATGCTCACAACTTCCCTCTAGACCTAGC 24459714 >seq1 Length=42145699 Score = 113 bits (124), Expect = 5e-20 Identities = 186/266 (70%), Gaps = 2/266 (1%) Strand=Plus/Plus Query 171207 GCCTTTGATCCTACACAGGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGG 171266 || ||| | || || || | ||||||||||| ||| | | || ||| | || ||| Sbjct 27067121 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGG 27067180 Query 171267 TCACAGATATTTGGTATTGCTTTCTCTAACAAAAGATTTTTACACTTCCTTATGTTGTTC 171326 || || ||||||||| ||||||| || || ||| | | ||||| ||| ||||| | || Sbjct 27067181 TCTCAAATATTTGGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTT 27067240 Query 171327 GTTCCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTCTAGCACTTAACCTC 171386 || || |||| | | | |||| | |||| || | ||||| || || || ||||| Sbjct 27067241 GTACCCGTCACCGAT-TATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTA 27067299 Query 171387 AGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGTTCGAGACT 171446 | || || || || | || || || || | ||||| ||||| || || || ||||| Sbjct 27067300 CGTGCCTATGACTTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACT 27067359 Query 171447 TTCTACACTAAGAATATACTTCTTAA 171472 |||||||| || ||||| ||| |||| Sbjct 27067360 TTCTACACCAAAAATATTCTT-TTAA 27067384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210360066080