Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq337 491 5e-134 seq14 491 5e-134 seq7 244 1e-59 seq4 242 4e-59 seq1 116 4e-21 seq5 89.7 6e-13 >seq337 Length=135516 Score = 491 bits (544), Expect = 5e-134 Identities = 701/987 (71%), Gaps = 0/987 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 |||||| | ||| |||| || | ||| | |||| | || ||||||||||| | Sbjct 1626 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 1567 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || || | || ||||| || || ||| Sbjct 1566 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCT 1507 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | || || ||| | |||||||| | ||||| ||||| Sbjct 1506 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 1447 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || || |||||||| || |||| | || || || || | || || ||||| || Sbjct 1446 ATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATT 1387 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| | || ||||||||||| |||||||| ||||||||| || | | | Sbjct 1386 TGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 1327 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | || ||||| | |||||||||| | | | Sbjct 1326 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1267 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 | |||||| | || ||||| ||| ||||||||||| ||||| |||| || |||| Sbjct 1266 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 1207 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | ||||| | ||||| || ||||||||||||||||| |||| || Sbjct 1206 GTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATA 1147 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| |||||||||||| | || ||||| || ||||| ||||| || |||||||| Sbjct 1146 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 1087 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || |||||| ||| ||||| || | || || || || ||||| || ||||| ||| Sbjct 1086 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 1027 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || |||||| || || || | || Sbjct 1026 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGT 967 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 ||||| || || ||||||||||| || || ||||| || || || |||||||| |||||| Sbjct 966 TACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGGT 907 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| |||||||||||| | | | ||||||||| | || Sbjct 906 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCT 847 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| ||| | | ||||| || || | ||||| |||| |||||||||||| Sbjct 846 GCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAAC 787 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 || || || ||||| ||||||||||| || || ||| | | ||| || || ||| Sbjct 786 CTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACT 727 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 |||| ||| | | ||| | || || || ||||||||||| ||||| ||| | ||||| Sbjct 726 TGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCT 667 Query 172780 CACAACTTCCCATTAGACCTTGCTTCT 172806 ||||||||||| ||||||| ||| || Sbjct 666 CACAACTTCCCTCTAGACCTAGCTGCT 640 Score = 358 bits (396), Expect = 8e-94 Identities = 706/1043 (68%), Gaps = 31/1043 (3%) Strand=Plus/Plus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | |||||||||||| || || |||||||| || | |||||||| || Sbjct 8990 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 9049 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | ||||||||||| | || | || |||||||| ||| ||||| || Sbjct 9050 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 9109 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || || |||||||| ||||| | || ||| ||| | ||||| || || ||| Sbjct 9110 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTA 9169 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTT 173185 || || || || ||||| |||| |||| | | || | |||| || | || | Sbjct 9170 ACCGCGGCGGTTTCCACTCCTG-----CCAATAGTTTAGCACACTCTTTGTTGCTACTAT 9224 Query 173186 GGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACT 173245 |||| || |||||||| || || ||||||| ||| | || || || |||| | Sbjct 9225 GGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTT 9284 Query 173246 TTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCG 173305 |||| || | ||||| | |||| ||| |||||||||||| | ||||| ||||| | | Sbjct 9285 TTGTCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTG 9344 Query 173306 CAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCT 173365 | | ||| | | ||||| || ||| | ||||||||| | |||||||| | Sbjct 9345 CTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTT 9404 Query 173366 TCACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCAT 173425 | | | | || | || || ||||| || || |||||||||| || || | Sbjct 9405 TTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTT 9464 Query 173426 TCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACAT 173485 | || || ||||| || ||||| | |||| | ||| | ||||| || || || || | Sbjct 9465 TTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGT 9524 Query 173486 TGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCA 173545 |||| |||||||| |||||||| ||||| ||| || |||| | ||| | ||||| || | Sbjct 9525 TGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTA 9584 Query 173546 TTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTA 173605 | ||||| || || || |||| ||| | ||| || || || ||| ||| Sbjct 9585 TCCATGGGGCTACCGT--AGAAAACACTCTAT---------TC-GAAGATGGTGATGGT- 9631 Query 173606 AGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTA 173665 | | || ||| | || ||| | || || || | |||||||||||| | Sbjct 9632 --------GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAA 9683 Query 173666 TGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGAT 173725 || | || || ||| | || ||||| || || |||||| | || ||||| || ||| | | Sbjct 9684 TGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTT 9743 Query 173726 TTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTA 173785 ||||| ||| | ||| | || ||||| |||| ||| | |||| | || || Sbjct 9744 GGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCG 9803 Query 173786 TCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAG 173845 | || || || || || ||||| | || || ||||| || || || || || | |||| Sbjct 9804 TAGTTGGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAG 9863 Query 173846 CAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGA 173905 | |||||||| || || |||||||||||||| || ||||| ||| | || || ||||| Sbjct 9864 CGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTC 9923 Query 173906 GAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGT 173965 | || |||||| || || ||||| || ||||| || | |||| || || || || Sbjct 9924 GTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTC 9983 Query 173966 TACCAAGAGGTAACGCACTTTAA 173988 ||||| | || ||||| |||||| Sbjct 9984 TACCACGTGGAAACGCTCTTTAA 10006 >seq14 Length=147140 Score = 491 bits (544), Expect = 5e-134 Identities = 701/987 (71%), Gaps = 0/987 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 |||||| | ||| |||| || | ||| | |||| | || ||||||||||| | Sbjct 81971 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 81912 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || || | || ||||| || || ||| Sbjct 81911 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCT 81852 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | || || ||| | |||||||| | ||||| ||||| Sbjct 81851 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 81792 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || || |||||||| || |||| | || || || || | || || ||||| || Sbjct 81791 ATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATT 81732 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| | || ||||||||||| |||||||| ||||||||| || | | | Sbjct 81731 TGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 81672 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | || ||||| | |||||||||| | | | Sbjct 81671 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 81612 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 | |||||| | || ||||| ||| ||||||||||| ||||| |||| || |||| Sbjct 81611 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 81552 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | ||||| | ||||| || ||||||||||||||||| |||| || Sbjct 81551 GTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATA 81492 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| |||||||||||| | || ||||| || ||||| ||||| || |||||||| Sbjct 81491 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCCA 81432 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || |||||| ||| ||||| || | || || || || ||||| || ||||| ||| Sbjct 81431 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGT 81372 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || |||||| || || || | || Sbjct 81371 TCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGGT 81312 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 ||||| || || ||||||||||| || || ||||| || || || |||||||| |||||| Sbjct 81311 TACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGGT 81252 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| |||||| |||||||||||| | | | ||||||||| | || Sbjct 81251 CGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCT 81192 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || ||||| ||| | | ||||| || || | ||||| |||| |||||||||||| Sbjct 81191 GCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAAC 81132 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 || || || ||||| ||||||||||| || || ||| | | ||| || || ||| Sbjct 81131 CTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACT 81072 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 |||| ||| | | ||| | || || || ||||||||||| ||||| ||| | ||||| Sbjct 81071 TGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCT 81012 Query 172780 CACAACTTCCCATTAGACCTTGCTTCT 172806 ||||||||||| ||||||| ||| || Sbjct 81011 CACAACTTCCCTCTAGACCTAGCTGCT 80985 Score = 349 bits (386), Expect = 4e-91 Identities = 705/1042 (68%), Gaps = 33/1042 (3%) Strand=Plus/Plus Query 172952 TTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGTC 173011 ||||| || | |||||||||||| || || |||||||| || | |||||||| || | Sbjct 89662 TTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCC 89721 Query 173012 TTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTCG 173071 | || || | ||||||||||| | || | || |||||||| ||| ||||| || | Sbjct 89722 TATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTG 89781 Query 173072 TTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTAA 173131 | || || |||||||| ||||| | || ||| ||| | ||||| || || |||| Sbjct 89782 TAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAA 89841 Query 173132 CAGCAGCAGTCTCCACACCTGGCGACGCAATGGGT---CATAGTCTT--CTGTTCCTTTG 173186 | || || || ||||| |||| |||| | | || | |||| || | || || Sbjct 89842 CCGCGGCGGTTTCCACTCCTG-----CCAATAGTTTAGCACACTCTTTGTTGCTACTATG 89896 Query 173187 GGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTT 173246 ||| || |||||||| || || ||||||| ||| | || || || |||| || Sbjct 89897 GGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTT 89956 Query 173247 TGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGC 173306 ||| || | ||||| | |||| ||| |||||||||||| | ||||| ||||| | || Sbjct 89957 TGTCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 90016 Query 173307 AGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTT 173366 | ||| | | ||||| || ||| | ||||||||| | |||||||| || Sbjct 90017 TCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTT 90076 Query 173367 CACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATT 173426 | | | || | || || ||||| || || |||||||||| || || || Sbjct 90077 TGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTT 90136 Query 173427 CGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATT 173486 || || ||||| || |||| | |||| | ||| | ||||| || || || || || Sbjct 90137 TGGCGTAGCAGCTAT-ATTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTT 90195 Query 173487 GAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCAT 173546 ||| |||||||| |||||||| ||||| ||| || |||| | ||| | ||||| || || Sbjct 90196 GAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTAT 90255 Query 173547 TCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAA 173606 ||||| || || || |||| ||| | ||| || || || ||| ||| Sbjct 90256 CCATGGGGCTACCGT--AGAAAACACTCTAT---------TC-GAAGATGGTGATGGT-- 90301 Query 173607 GATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTAT 173666 | | || ||| | || ||| | || || || | |||||||||||| || Sbjct 90302 -------GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAAT 90354 Query 173667 GATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATT 173726 | | || || ||| | || ||||| || || |||||| | || ||||| || ||| | | Sbjct 90355 GGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTG 90414 Query 173727 TTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTAT 173786 ||||| ||| | ||| | || ||||| |||| ||| | |||| | || || | Sbjct 90415 GTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGT 90474 Query 173787 CGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGC 173846 || || || || || ||||| | || || ||||| || || || || || | ||||| Sbjct 90475 AGTTGGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGC 90534 Query 173847 AGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAG 173906 |||||||| || || |||||||||||||| || ||||| ||| | || || ||||| | Sbjct 90535 GGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCG 90594 Query 173907 AGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTT 173966 || |||||| || || |||||| || ||||| || | |||| || || || || | Sbjct 90595 TGCGTGGATGGCAGCT-CAGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCT 90653 Query 173967 ACCAAGAGGTAACGCACTTTAA 173988 |||| | || ||||| |||||| Sbjct 90654 ACCACGTGGAAACGCTCTTTAA 90675 >seq7 Length=35964315 Score = 244 bits (270), Expect = 1e-59 Identities = 326/453 (72%), Gaps = 0/453 (0%) Strand=Plus/Plus Query 172351 ATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCA 172410 |||||||| || |||||| ||| ||||| || | || || || || ||||| || Sbjct 24459263 ATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCT 24459322 Query 172411 ATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAG 172470 ||||| ||||| || || || | | | | ||||| || || |||||| || || Sbjct 24459323 ATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCT 24459382 Query 172471 AACTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGT 172530 || | || ||||| || || |||||||||| | || ||||| || || || || ||| Sbjct 24459383 AATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCTCATGGT 24459442 Query 172531 TACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTC 172590 || |||||||| | |||||||| |||||| |||||||||||| | | | |||||| Sbjct 24459443 TATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTACACTTC 24459502 Query 172591 TTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATG 172650 ||| | || | || ||||| ||| | | ||||| || || | ||||| |||| ||| Sbjct 24459503 TTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATG 24459562 Query 172651 GCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATT 172710 ||||||||||| || |||||||| ||||||||||| || || ||| | | ||| || Sbjct 24459563 GCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTT 24459622 Query 172711 GTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAA 172770 || ||| |||| ||| | ||| | || || || ||||||||||| ||||| ||| Sbjct 24459623 ATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAA 24459682 Query 172771 AGAAATGCACACAACTTCCCATTAGACCTTGCT 172803 | ||||| ||||||||||| ||||||| ||| Sbjct 24459683 CGTAATGCTCACAACTTCCCTCTAGACCTAGCT 24459715 >seq4 Length=40407879 Score = 242 bits (268), Expect = 4e-59 Identities = 579/873 (66%), Gaps = 32/873 (4%) Strand=Plus/Plus Query 173121 AAACTTTTTAACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGT---CATAGTCTTC- 173176 ||| || ||||| || || || ||||| |||| | ||| | | || | |||| Sbjct 27919943 AAATTTCTTAACCGCGGCGGTTTCCACTCCTGCC-----AATAGTTTAGCACACTCTTTG 27919997 Query 173177 -TGTTCCTTTGGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGA 173235 || | || ||||| || |||||||| || || ||||||| ||| | || || Sbjct 27919998 TTGCTACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGT 27920057 Query 173236 CTATGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAG 173295 || |||| |||||| || | ||||| | |||| ||| ||| |||||||| | ||||| Sbjct 27920058 CTGTGGA-CTTTGTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAA 27920116 Query 173296 TTTGAGATCGCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTT 173355 ||||| | || | ||| | | ||||| || ||| | |||||||| | Sbjct 27920117 TTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTAGTCCA 27920176 Query 173356 ATCGCAGTCTTCACTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTC 173415 |||||||| || | | | || | || || ||||| || || |||||||||| Sbjct 27920177 ATCGCAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTT 27920236 Query 173416 GCACCTTCATTCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCAC 173475 || || || || || ||||| || ||||| | |||| | ||| | ||||| || || Sbjct 27920237 GCGCCGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCAT 27920296 Query 173476 AACATTACATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTA 173535 || || ||||| |||||||| |||||||| ||||| || || |||||| ||| | Sbjct 27920297 AATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTATTAGGTGTAGCTCTG 27920356 Query 173536 CTATGTGCCATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATAT 173595 ||||| || || ||||| || || || | ||||| | | |||||| | Sbjct 27920357 CTATGCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGA------------T 27920404 Query 173596 ACTGAAGGTAAGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAA 173655 ||| ||| ||| | | ||||| | || ||| | || || || || |||||| Sbjct 27920405 GGTGATGGTG-----CAA---ATACCTTTC-GCGCTTTTAACCCAACTCAAGATGAAGAA 27920455 Query 173656 ACTTATAGTATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCA 173715 |||||| ||| | | || ||| | || ||||| || || |||||| | || ||||| Sbjct 27920456 ACTTATTCAATGGTCATTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCC 27920515 Query 173716 AACAAAAGATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCA 173775 || ||| | ||||| ||| | ||| | || ||||| |||| || | |||| Sbjct 27920516 AATAAACATTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCAGTTTATGGATGAGT 27920575 Query 173776 TCCATAGGTATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAG 173835 | || || | || || | || || ||||| || || ||||| | || || || Sbjct 27920576 GCTATTGGCGTAGTTGGCTTGGCTCTGAACCTACATGCCTATGACTTCATTTCCCAGGAA 27920635 Query 173836 ATAAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAAT 173895 || | ||||| |||||||| || || |||||||||||||| || ||||| ||| | || Sbjct 27920636 ATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAAC 27920695 Query 173896 GAAGGTATGAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCA 173955 | ||||| | || |||||| || || ||||| || ||||| || | |||| || Sbjct 27920696 CAGGGTATTTGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCT 27920755 Query 173956 GAAGAAGTGTTACCAAGAGGTAACGCACTTTAA 173988 || || || ||||| | || ||||| |||||| Sbjct 27920756 GAGGAGGTTCTACCATGTGGAAACGCTCTTTAA 27920788 >seq1 Length=42145699 Score = 116 bits (128), Expect = 4e-21 Identities = 187/266 (70%), Gaps = 2/266 (1%) Strand=Plus/Plus Query 173629 GCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACAGCGAACAGATTCTGG 173688 || ||| | || || || | |||||||||||| ||| | | || ||| | || ||| Sbjct 27067121 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGG 27067180 Query 173689 TCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACTTCCTCATGTTGTTC 173748 || || ||||||||| | || ||||| || ||| | | ||||| ||| | ||| | || Sbjct 27067181 TCTCAAATATTTGGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTT 27067240 Query 173749 GTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTCTTGCACTTAACCTT 173808 ||||| |||| | | | |||| | | || || | ||||| || || || ||||| Sbjct 27067241 GTACCCGTCACCGAT-TATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTA 27067299 Query 173809 AGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGAGACT 173868 | || || ||||| | || || || || | ||||| |||||||| || || ||||| Sbjct 27067300 CGTGCCTATGACTTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACT 27067359 Query 173869 TTCTACACTAAGAATATACTTCTTAA 173894 |||||||| || ||||| ||| |||| Sbjct 27067360 TTCTACACCAAAAATATTCTT-TTAA 27067384 >seq5 Length=47252588 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752 ||| || ||||| || ||||| ||| | || ||||||||||| || |||||||| || || Sbjct 34917889 TGGAGCTGATGTTTGCCATCTTAACCTTCACAAGACATTCTGCATCCCACATGGTGGAGG 34917948 Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||||||| | |||||||||||||| Sbjct 34917949 TGGTCCTGGCATGGGTCCTATTGGTGT 34917975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588048722834320