Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq337 657 0.0 seq14 657 0.0 seq4 471 5e-128 seq7 300 2e-76 seq1 172 6e-38 >seq337 Length=135516 Score = 657 bits (728), Expect = 0.0 Identities = 735/989 (74%), Gaps = 2/989 (0%) Strand=Plus/Minus Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146 ||| ||| | ||| | || ||||| | |||||||| || |||| |||||||| ||| | Sbjct 1627 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 1568 Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 |||||||||||| || | | ||||| || || || || ||||||||| ||| ||||| Sbjct 1567 GATGATCCCTACCTTATTGACCGCAACT-TCCGTATTTATTATCGCCTTCATCGCTGCTC 1509 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 |||| || || || |||||||| || || || ||| ||||||| | | ||||| |||| Sbjct 1508 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACA 1449 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 | || || |||||||| || ||||| ||||| || || || | || || || || | Sbjct 1448 ATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAA 1389 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385 | |||||||| ||| | | || || ||||| |||||||| ||||||| | || | | Sbjct 1388 TTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTG 1329 Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445 || | |||||| | |||| | | ||||||||||||||||||||||| || || Sbjct 1328 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 1269 Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505 |||| |||||||| || ||||| ||||||||| || ||||| || || || || ||| Sbjct 1268 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 1209 Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565 |||| ||| | | |||||| | |||||||| ||||||||| | |||||| | || | Sbjct 1208 CTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 1149 Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625 | |||||||| ||||||| ||| |||| ||||| || |||||||||||||| ||||| | Sbjct 1148 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATC 1089 Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685 | || || ||| | || || ||||| |||||||||||||| || |||||||| ||||| | Sbjct 1088 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 1029 Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745 |||| |||| |||||| || | | |||||||| |||| |||||| || | | Sbjct 1028 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGG 969 Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805 ||||||| || ||||| ||||||||||| |||||||| || |||||||| ||||| || | Sbjct 968 GTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTG 909 Query 167806 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGG 167865 |||| | ||||||||||| || ||||||||||| || || | ||||||||||||| Sbjct 908 GTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 849 Query 167866 CAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCA 167925 | || |||||||| || || ||||||| ||||| Sbjct 848 CTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCA 789 Query 167926 ACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTA 167985 |||| || || ||||| |||||||| ||| | |||||||| ||| ||| | || Sbjct 788 ACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 729 Query 167986 CTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 168045 ||||||| || | ||||||||||| ||| ||||||||||| |||||||| ||||||| Sbjct 728 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 669 Query 168046 CTCACAACTTCCCTCTCGACCTTGCTGCT 168074 |||||||||||||||| ||||| |||||| Sbjct 668 CTCACAACTTCCCTCTAGACCTAGCTGCT 640 Score = 630 bits (698), Expect = 8e-176 Identities = 746/1004 (74%), Gaps = 6/1004 (1%) Strand=Plus/Plus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 || |||||| | | |||| |||||||||||||| || ||||| || || | || ||| Sbjct 9002 GACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCTTT 9061 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||||||| | ||| | || |||||| |||| |||||| |||| || || |||| Sbjct 9062 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTTGG 9121 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAG 168672 ||||| || || ||||| ||||||||| |||| || |||| ||||||| | ||||| | Sbjct 9122 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCGGCGG 9179 Query 168673 TTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCAC 168732 || ||||| || || | | | || ||| | |||| || ||||| || || |||| Sbjct 9180 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 9239 Query 168733 AAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACG 168792 | |||||||| | ||||||||| | || || || ||| ||||||| || ||||| | Sbjct 9240 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 9299 Query 168793 GGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 168851 ||||||| || ||||| ||||||||| | ||||| |||||||| || || ||| || | Sbjct 9300 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 9359 Query 168852 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 168911 | || || || ||||| ||| | ||||||||||| ||||| ||||||||| ||| || Sbjct 9360 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 9418 Query 168912 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 168971 || || || || ||||| ||||| ||||||| || || || ||| || || |||| Sbjct 9419 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 9478 Query 168972 ATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCAT 169031 || || ||||| | || ||| | |||||||| ||||| ||||| |||| ||||||||| Sbjct 9479 ATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 9538 Query 169032 ATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACA 169091 |||||||| || || || | || || | ||| |||| | || || ||||| | ||| Sbjct 9539 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 9598 Query 169092 GTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGC 169151 ||||| || ||||| | |||||||||| |||||||| ||| || ||| || Sbjct 9599 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 9658 Query 169152 ACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 169211 ||||| | || || || ||||||||||| ||||| ||||| || ||||| || |||||| Sbjct 9659 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 9718 Query 169212 GGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 169271 ||| |||| || ||||| | ||||| |||||||||||||| ||||| || || | Sbjct 9719 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 9778 Query 169272 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 169331 ||| | |||| ||| | || || | |||| || ||||| ||||| ||||| |||||| Sbjct 9779 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 9838 Query 169332 TTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAG 169391 || |||||||| || ||| | ||||| |||||||| || |||||||| ||||||||||| Sbjct 9839 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 9898 Query 169392 AACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAG 169451 || || || || ||||| ||| ||||||| ||| | ||| || ||||| |||||||| Sbjct 9899 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 9958 Query 169452 AACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 || || | ||||||||||| || || || || || || || || Sbjct 9959 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 10002 >seq14 Length=147140 Score = 657 bits (728), Expect = 0.0 Identities = 735/989 (74%), Gaps = 2/989 (0%) Strand=Plus/Minus Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146 ||| ||| | ||| | || ||||| | |||||||| || |||| |||||||| ||| | Sbjct 81972 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 81913 Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 |||||||||||| || | | ||||| || || || || ||||||||| ||| ||||| Sbjct 81912 GATGATCCCTACCTTATTGACCGCAACT-TCCGTATTTATTATCGCCTTCATCGCTGCTC 81854 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 |||| || || || |||||||| || || || ||| ||||||| | | ||||| |||| Sbjct 81853 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACA 81794 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 | || || |||||||| || ||||| ||||| || || || | || || || || | Sbjct 81793 ATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAA 81734 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385 | |||||||| ||| | | || || ||||| |||||||| ||||||| | || | | Sbjct 81733 TTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTG 81674 Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445 || | |||||| | |||| | | ||||||||||||||||||||||| || || Sbjct 81673 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 81614 Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505 |||| |||||||| || ||||| ||||||||| || ||||| || || || || ||| Sbjct 81613 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 81554 Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565 |||| ||| | | |||||| | |||||||| ||||||||| | |||||| | || | Sbjct 81553 CTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 81494 Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625 | |||||||| ||||||| ||| |||| ||||| || |||||||||||||| ||||| | Sbjct 81493 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATC 81434 Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685 | || || ||| | || || ||||| |||||||||||||| || |||||||| ||||| | Sbjct 81433 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 81374 Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745 |||| |||| |||||| || | | |||||||| |||| |||||| || | | Sbjct 81373 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGG 81314 Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805 ||||||| || ||||| ||||||||||| |||||||| || |||||||| ||||| || | Sbjct 81313 GTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTG 81254 Query 167806 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGG 167865 |||| | ||||||||||| || ||||||||||| || || | ||||||||||||| Sbjct 81253 GTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 81194 Query 167866 CAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCA 167925 | || |||||||| || || ||||||| ||||| Sbjct 81193 CTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCA 81134 Query 167926 ACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTA 167985 |||| || || ||||| |||||||| ||| | |||||||| ||| ||| | || Sbjct 81133 ACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 81074 Query 167986 CTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 168045 ||||||| || | ||||||||||| ||| ||||||||||| |||||||| ||||||| Sbjct 81073 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 81014 Query 168046 CTCACAACTTCCCTCTCGACCTTGCTGCT 168074 |||||||||||||||| ||||| |||||| Sbjct 81013 CTCACAACTTCCCTCTAGACCTAGCTGCT 80985 Score = 623 bits (690), Expect = 1e-173 Identities = 746/1004 (74%), Gaps = 8/1004 (1%) Strand=Plus/Plus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 || |||||| | | |||| |||||||||||||| || ||||| || || | || ||| Sbjct 89673 GACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCTTT 89732 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||||||| | ||| | || |||||| |||| |||||| |||| || || |||| Sbjct 89733 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTTGG 89792 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAG 168672 ||||| || || ||||| ||||||||| |||| || |||| ||||||| | ||||| | Sbjct 89793 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCGGCGG 89850 Query 168673 TTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCAC 168732 || ||||| || || | | | || ||| | |||| || ||||| || || |||| Sbjct 89851 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 89910 Query 168733 AAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACG 168792 | |||||||| | ||||||||| | || || || ||| ||||||| || ||||| | Sbjct 89911 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 89970 Query 168793 GGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 168851 ||||||| || ||||| ||||||||| | ||||| |||||||| || || ||| || | Sbjct 89971 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 90030 Query 168852 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 168911 | || || || ||||| ||| | ||||||||||| ||||| ||||||||| ||| || Sbjct 90031 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 90089 Query 168912 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 168971 || || || || ||||| ||||| ||||||| || || || ||| || || |||| Sbjct 90090 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 90149 Query 168972 ATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCAT 169031 || ||| |||| | || ||| | |||||||| ||||| ||||| |||| ||||||||| Sbjct 90150 ATATTC-GATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 90208 Query 169032 ATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACA 169091 |||||||| || || || | || || | ||| |||| | || || ||||| | ||| Sbjct 90209 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 90268 Query 169092 GTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGC 169151 ||||| || ||||| | |||||||||| |||||||| ||| || ||| || Sbjct 90269 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 90328 Query 169152 ACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 169211 ||||| | || || || ||||||||||| ||||| ||||| || ||||| || |||||| Sbjct 90329 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 90388 Query 169212 GGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 169271 ||| |||| || ||||| | ||||| |||||||||||||| ||||| || || | Sbjct 90389 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 90448 Query 169272 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 169331 ||| | |||| ||| | || || | |||| || ||||| ||||| ||||| |||||| Sbjct 90449 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 90508 Query 169332 TTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAG 169391 || |||||||| || ||| | ||||| |||||||| || |||||||| ||||||||||| Sbjct 90509 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 90568 Query 169392 AACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAG 169451 || || || || ||||| ||| ||||||| ||| | ||| || ||||| |||||||| Sbjct 90569 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCT-CAGATCAGCCTCATGAA 90627 Query 169452 AACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 || || | ||||||||||| || || || || || || || || Sbjct 90628 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 90671 >seq4 Length=40407879 Score = 471 bits (522), Expect = 5e-128 Identities = 605/829 (73%), Gaps = 4/829 (0%) Strand=Plus/Plus Query 168654 AACTTTCTTA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCT 168712 || ||||||| | ||||| ||| ||||| || || | | | || ||| | |||| Sbjct 27919943 AAATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCT 27920002 Query 168713 TCTCTGGGGTCCTGAGGCACAAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTG 168772 || ||||| || || ||||| |||||||| | ||||||||| | || || || || Sbjct 27920003 ACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTG 27920062 Query 168773 GGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGA 168832 | |||| || || ||||| |||||||| || ||||| |||||||| | ||||| ||||| Sbjct 27920063 GACTTT-GTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAATTTGA 27920121 Query 168833 ACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCG 168891 ||| || || ||| || | | || || || ||||| ||| | |||||| |||| |||| Sbjct 27920122 ACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTAGTCCAATCG 27920180 Query 168892 CTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTC 168951 | ||||||||| ||| || || || || || ||||| ||||| ||||||| || || | Sbjct 27920181 CAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGC 27920240 Query 168952 CATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACT 169011 | ||| || || |||| || || ||||| | || ||| | |||||||| ||||| | Sbjct 27920241 CGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATT 27920300 Query 169012 GGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTT 169071 |||| |||| ||||||||||||||||| || || | | || || | ||| |||| | Sbjct 27920301 GGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTATTAGGTGTAGCTCTGCTAT 27920360 Query 169072 CTGCCATTCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATA 169131 || || ||||| | ||| ||||| || ||||| | | |||||||||| ||||||| Sbjct 27920361 GCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGATGGTGATGGTGCAAATA 27920420 Query 169132 CTTTCAAAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACC 169191 | || || ||| || ||||| || || || || ||||||||||| | ||| |||| Sbjct 27920421 CCTTTCGCGCTTTTAACCCAACTCAAGATGAAGAAACTTATTCAATGGTCATTGCTAACC 27920480 Query 169192 GTTTCTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTA 169251 | || ||||| || ||||||||| |||| || ||||| ||||| |||||||||| Sbjct 27920481 GCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACATTGGTTACATTTCTTTA 27920540 Query 169252 TGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTC 169311 |||| ||||| || || | || | |||| ||| | || || | |||| | |||| Sbjct 27920541 TGCTATTTGTACCCGTCACCAGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTC 27920600 Query 169312 TCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGT 169371 | ||||| | ||| |||||||| ||||||| || ||| | ||||| |||||||| || | Sbjct 27920601 TGAACCTACATGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAAT 27920660 Query 169372 TTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCAC 169431 ||||||| ||||||||||| || || || || ||| | ||| || |||| ||| | ||| Sbjct 27920661 TTGAGACTTTCTACACCAAAAATATTCTTTTAAACCAGGGTATTTGTGCGTGGATGGCAG 27920720 Query 169432 CTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCC 169480 || ||||| |||||||| || || | ||||||||||| || || || Sbjct 27920721 CTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACC 27920769 >seq7 Length=35964315 Score = 300 bits (332), Expect = 2e-76 Identities = 337/460 (73%), Gaps = 0/460 (0%) Strand=Plus/Plus Query 167613 ATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTC 167672 ||| | ||||| || || || ||| | || || ||||| |||||||||||||| || ||| Sbjct 24459257 ATCATTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTC 24459316 Query 167673 AGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAG 167732 ||||| ||||| ||||| |||| |||| | || | | |||||||| |||| |||| Sbjct 24459317 AGTGCTATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAG 24459376 Query 167733 TCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCT 167792 || || | |||||||| || ||||| ||||||| || |||||||| || |||||| Sbjct 24459377 TCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCT 24459436 Query 167793 CATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTG 167852 |||||||| || ||||| | ||||||||||| || ||||||||||| | || | Sbjct 24459437 CATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTA 24459496 Query 167853 CACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNN 167912 |||||||||||||| || |||||||| || || ||||||| Sbjct 24459497 CACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGT 24459556 Query 167913 NNNNNNNNATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGT 167972 ||||||||| || |||||||| |||||||| ||| | |||||||| ||| Sbjct 24459557 ACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 24459616 Query 167973 AAGGTTCTGCCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATG 168032 ||| | ||||||||| || | |||||||||| ||| ||||||||||| ||| Sbjct 24459617 CGCGTTATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATG 24459676 Query 168033 CACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTG 168072 ||||| ||||||||||||||||||||||| ||||| |||| Sbjct 24459677 CACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTG 24459716 >seq1 Length=42145699 Score = 172 bits (190), Expect = 6e-38 Identities = 193/257 (75%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 169152 ACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 169211 ||||| | || || || ||||||||||| | ||| ||||| || |||||||| || ||| Sbjct 27067133 ACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGGTCTCAAATATTT 27067192 Query 169212 GGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 169271 ||| |||| || ||||| | ||||| |||||||||||||| ||||| || || | Sbjct 27067193 GGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 27067252 Query 169272 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 169331 | | | |||| | | | || || | | || || ||||| ||||| ||||| |||||| Sbjct 27067253 GAT-TATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTACGTGCCTATGAC 27067311 Query 169332 TTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAG 169391 || ||||||| || ||| | ||||| |||||||| || ||| |||| ||||||||||| Sbjct 27067312 TTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACTTTCTACACCAAA 27067371 Query 169392 AACATCCTCTTGAACGA 169408 || || || || ||||| Sbjct 27067372 AATATTCTTTTAAACGA 27067388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560605638438800