Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq337 720 0.0 seq14 720 0.0 seq4 480 9e-131 seq7 300 2e-76 seq1 170 2e-37 >seq337 Length=135516 Score = 720 bits (798), Expect = 0.0 Identities = 754/988 (76%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 164764 TTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTT 164823 || ||| | ||| | ||| |||| | ||||||||||| |||| |||||||||||| | Sbjct 1626 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 1567 Query 164824 ATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCC 164882 |||||||| || | |||| || | || ||||||| || |||||||||||||| Sbjct 1566 ATGATCCCTACCTTATTGACCGCAACT-TCCGTATTTATTATCGCCTTCATCGCTGCTCC 1508 Query 164883 CCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAA 164942 || || || ||||||||||||||||| ||||| | |||||| || | || || ||||| Sbjct 1507 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 1448 Query 164943 CATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTAT 165002 || || ||||||||| | |||| ||||| || |||||| | || || || || || Sbjct 1447 TATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAAT 1388 Query 165003 TTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGT 165062 ||||||||||||| | | ||||||||||| ||||| || |||||||| || | |||| Sbjct 1387 TTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1328 Query 165063 CTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 165122 | |||||| | | ||||||||||| || |||||||||||||||||||| || ||| Sbjct 1327 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 1268 Query 165123 CCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGC 165182 || |||||||| ||||||||| || |||||| || ||||| || |||||| | || Sbjct 1267 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 1208 Query 165183 AGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTAT 165242 |||||| || | |||||| | |||||||| ||||||||||||||||||||| | || || Sbjct 1207 TGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 1148 Query 165243 CTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCC 165302 ||||||||||| |||| |||| | || ||||| || || || ||||| ||||||||||| Sbjct 1147 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 1088 Query 165303 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 165362 || |||||| | || || ||||| |||||||| || || || ||| |||||||||||| Sbjct 1087 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 1028 Query 165363 AAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGG 165422 | || || || | || | || || ||||||| ||| | || | || Sbjct 1027 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGG 968 Query 165423 TTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGG 165482 ||| || ||||| |||||||||||||| |||||||| || ||||| ||||| || || || Sbjct 967 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGG 908 Query 165483 TCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGC 165542 ||| | || |||||||| || |||||||| || ||||| | ||||||||| | || Sbjct 907 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 848 Query 165543 AGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAA 165602 || ||||||||||| || ||||||||||||||| | ||| |||| || ||||||||||| Sbjct 847 TGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAA 788 Query 165603 CCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTAC 165662 ||| || || ||||| |||||||| ||| | ||||||||||| | || ||| Sbjct 787 CCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 728 Query 165663 TTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 165722 ||||||||| | | ||||||||| ||| ||||||||||| ||||| || ||||| || Sbjct 727 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 668 Query 165723 TCACAACTTCCCCCTCGACCTCGCTGCT 165750 |||||||||||| || ||||| |||||| Sbjct 667 TCACAACTTCCCTCTAGACCTAGCTGCT 640 Score = 607 bits (672), Expect = 9e-169 Identities = 743/1008 (74%), Gaps = 6/1008 (1%) Strand=Plus/Plus Query 166173 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTT 166232 ||||||||| | | | || |||||||||||||| || ||||| || || | || || Sbjct 9002 GACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCTTT 9061 Query 166233 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGG 166292 || ||||||| | ||| | || |||||| | || ||||||||||| || || |||| Sbjct 9062 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTTGG 9121 Query 166293 TATACTCATGGACTCGCAAGCAGTTATCTGGAGGGT-GCAAACTTTCTTA-CTGCGGCAG 166350 ||||| |||||| | || || ||| |||| ||| |||| ||||||| | ||||| | Sbjct 9122 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCGGCGG 9179 Query 166351 TTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTC 166410 |||| ||||| || || | | | || ||| | | || || ||||| || || || | Sbjct 9180 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 9239 Query 166411 AAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACG 166470 | |||||||| | ||||| ||| | || || || ||| | ||||| |||||||| | Sbjct 9240 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 9299 Query 166471 GTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGT 166529 | |||||||| ||||| ||||||||| | || || |||||| | ||||| ||| | | Sbjct 9300 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 9359 Query 166530 ATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTT 166589 | || || || |||||||| | || |||||||| || || || || ||| || || Sbjct 9360 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 9418 Query 166590 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 166649 || || || || ||||| ||||| ||||||| || || || ||| || || |||| Sbjct 9419 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 9478 Query 166650 ATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCAT 166709 || || ||||| |||||||| | |||||||| || || ||||| |||||||||||||| Sbjct 9479 ATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 9538 Query 166710 ATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACA 166769 |||||||| || || || | | || | || |||| | || |||||||| | ||| Sbjct 9539 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 9598 Query 166770 GTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCT 166829 ||||| |||||||| | |||||||||| |||||||| ||| || || || | Sbjct 9599 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 9658 Query 166830 ACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTC 166889 ||||||| |||||||| ||||||||||| || || ||||||| |||||| || ||||| Sbjct 9659 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 9718 Query 166890 GGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 166949 ||| |||| ||| ||||| | ||||| |||||||||||||| ||||| || || | Sbjct 9719 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 9778 Query 166950 GGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 167009 ||| | |||| ||| | || || | |||| || ||||| ||||| ||||| |||||| Sbjct 9779 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 9838 Query 167010 TTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAG 167069 || |||||||| ||| | | ||||| || |||||||| ||||| || ||||| ||||| Sbjct 9839 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 9898 Query 167070 AACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAG 167129 || ||||| || || |||||||| ||| | ||||||||| || ||||| |||||||| Sbjct 9899 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 9958 Query 167130 AGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 | | | |||||||||| |||||||| || | || |||||||| ||| Sbjct 9959 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 10006 >seq14 Length=147140 Score = 720 bits (798), Expect = 0.0 Identities = 754/988 (76%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 164764 TTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTT 164823 || ||| | ||| | ||| |||| | ||||||||||| |||| |||||||||||| | Sbjct 81971 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 81912 Query 164824 ATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCC 164882 |||||||| || | |||| || | || ||||||| || |||||||||||||| Sbjct 81911 ATGATCCCTACCTTATTGACCGCAACT-TCCGTATTTATTATCGCCTTCATCGCTGCTCC 81853 Query 164883 CCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAA 164942 || || || ||||||||||||||||| ||||| | |||||| || | || || ||||| Sbjct 81852 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 81793 Query 164943 CATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTAT 165002 || || ||||||||| | |||| ||||| || |||||| | || || || || || Sbjct 81792 TATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAAT 81733 Query 165003 TTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGT 165062 ||||||||||||| | | ||||||||||| ||||| || |||||||| || | |||| Sbjct 81732 TTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 81673 Query 165063 CTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 165122 | |||||| | | ||||||||||| || |||||||||||||||||||| || ||| Sbjct 81672 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 81613 Query 165123 CCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGC 165182 || |||||||| ||||||||| || |||||| || ||||| || |||||| | || Sbjct 81612 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 81553 Query 165183 AGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTAT 165242 |||||| || | |||||| | |||||||| ||||||||||||||||||||| | || || Sbjct 81552 TGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 81493 Query 165243 CTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCC 165302 ||||||||||| |||| |||| | || ||||| || || || ||||| ||||||||||| Sbjct 81492 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 81433 Query 165303 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 165362 || |||||| | || || ||||| |||||||| || || || ||| |||||||||||| Sbjct 81432 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 81373 Query 165363 AAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGG 165422 | || || || | || | || || ||||||| ||| | || | || Sbjct 81372 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGG 81313 Query 165423 TTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGG 165482 ||| || ||||| |||||||||||||| |||||||| || ||||| ||||| || || || Sbjct 81312 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGG 81253 Query 165483 TCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGC 165542 ||| | || |||||||| || |||||||| || ||||| | ||||||||| | || Sbjct 81252 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 81193 Query 165543 AGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAA 165602 || ||||||||||| || ||||||||||||||| | ||| |||| || ||||||||||| Sbjct 81192 TGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAA 81133 Query 165603 CCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTAC 165662 ||| || || ||||| |||||||| ||| | ||||||||||| | || ||| Sbjct 81132 CCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 81073 Query 165663 TTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 165722 ||||||||| | | ||||||||| ||| ||||||||||| ||||| || ||||| || Sbjct 81072 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 81013 Query 165723 TCACAACTTCCCCCTCGACCTCGCTGCT 165750 |||||||||||| || ||||| |||||| Sbjct 81012 TCACAACTTCCCTCTAGACCTAGCTGCT 80985 Score = 600 bits (664), Expect = 1e-166 Identities = 743/1008 (74%), Gaps = 8/1008 (1%) Strand=Plus/Plus Query 166173 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTT 166232 ||||||||| | | | || |||||||||||||| || ||||| || || | || || Sbjct 89673 GACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCTTT 89732 Query 166233 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGG 166292 || ||||||| | ||| | || |||||| | || ||||||||||| || || |||| Sbjct 89733 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTTGG 89792 Query 166293 TATACTCATGGACTCGCAAGCAGTTATCTGGAGGGT-GCAAACTTTCTTA-CTGCGGCAG 166350 ||||| |||||| | || || ||| |||| ||| |||| ||||||| | ||||| | Sbjct 89793 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCGGCGG 89850 Query 166351 TTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTC 166410 |||| ||||| || || | | | || ||| | | || || ||||| || || || | Sbjct 89851 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 89910 Query 166411 AAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACG 166470 | |||||||| | ||||| ||| | || || || ||| | ||||| |||||||| | Sbjct 89911 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 89970 Query 166471 GTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGT 166529 | |||||||| ||||| ||||||||| | || || |||||| | ||||| ||| | | Sbjct 89971 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 90030 Query 166530 ATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTT 166589 | || || || |||||||| | || |||||||| || || || || ||| || || Sbjct 90031 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 90089 Query 166590 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 166649 || || || || ||||| ||||| ||||||| || || || ||| || || |||| Sbjct 90090 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 90149 Query 166650 ATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCAT 166709 || ||| |||| |||||||| | |||||||| || || ||||| |||||||||||||| Sbjct 90150 ATATTC-GATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 90208 Query 166710 ATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACA 166769 |||||||| || || || | | || | || |||| | || |||||||| | ||| Sbjct 90209 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 90268 Query 166770 GTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCT 166829 ||||| |||||||| | |||||||||| |||||||| ||| || || || | Sbjct 90269 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 90328 Query 166830 ACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTC 166889 ||||||| |||||||| ||||||||||| || || ||||||| |||||| || ||||| Sbjct 90329 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 90388 Query 166890 GGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 166949 ||| |||| ||| ||||| | ||||| |||||||||||||| ||||| || || | Sbjct 90389 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 90448 Query 166950 GGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 167009 ||| | |||| ||| | || || | |||| || ||||| ||||| ||||| |||||| Sbjct 90449 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 90508 Query 167010 TTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAG 167069 || |||||||| ||| | | ||||| || |||||||| ||||| || ||||| ||||| Sbjct 90509 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 90568 Query 167070 AACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAG 167129 || ||||| || || |||||||| ||| | ||||||||| || ||||| |||||||| Sbjct 90569 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCT-CAGATCAGCCTCATGAA 90627 Query 167130 AGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 | | | |||||||||| |||||||| || | || |||||||| ||| Sbjct 90628 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 90675 >seq4 Length=40407879 Score = 480 bits (532), Expect = 9e-131 Identities = 622/850 (73%), Gaps = 8/850 (1%) Strand=Plus/Plus Query 166332 AACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCT 166390 || ||||||| | ||||| ||||| ||||| || || | | | || ||| | | || Sbjct 27919943 AAATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCT 27920002 Query 166391 TCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTG 166450 || ||||| || || || || |||||||| | ||||| ||| | || || || || Sbjct 27920003 ACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTG 27920062 Query 166451 GGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGA 166510 | | ||||| |||||||| || |||||||| ||||| |||||||| | || || ||||| Sbjct 27920063 GAC-TTTGTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAATTTGA 27920121 Query 166511 AATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTG 166569 | | ||||| ||| | | | || || || |||||||| | || ||| |||| || | Sbjct 27920122 ACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTAGTCCAATCG 27920180 Query 166570 CTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTC 166629 | || || ||| || || || || || || ||||| ||||| ||||||| || || | Sbjct 27920181 CAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGC 27920240 Query 166630 CATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACT 166689 | ||| || || |||| || || ||||| |||||||| | |||||||| || || | Sbjct 27920241 CGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATT 27920300 Query 166690 GGACACTGAACCCATTTCATATGATGGGTGTAG-CAG-GTATTCTCGGTGGTGCATTGCT 166747 |||| |||||||||||||||||||||| || | ||| |||| | |||| || |||| Sbjct 27920301 GGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTAT--TAGGTGTAGCTCTGCT 27920358 Query 166748 TTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAA 166807 | || |||||||| | ||| ||||| |||||||| | | |||||||||| ||||| Sbjct 27920359 ATGCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGATGGTGATGGTGCAAA 27920418 Query 166808 TACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAA 166867 ||| || || || || | |||||||| |||||||| ||||||||||| | || || Sbjct 27920419 TACCTTTCGCGCTTTTAACCCAACTCAAGATGAAGAAACTTATTCAATGGTCATTGCTAA 27920478 Query 166868 CCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTT 166927 ||||| |||||| || ||||| ||| |||| ||| ||||| ||||| |||||||| Sbjct 27920479 CCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACATTGGTTACATTTCTT 27920538 Query 166928 TATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGC 166987 |||||| ||||| || || | || | |||| ||| | || || | |||| | || Sbjct 27920539 TATGCTATTTGTACCCGTCACCAGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGC 27920598 Query 166988 TCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGA 167047 ||| ||||| | ||| |||||||| ||||||| ||| | | ||||| || |||||||| Sbjct 27920599 TCTGAACCTACATGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGA 27920658 Query 167048 GTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGC 167107 ||||| || ||||| ||||| || ||||| || || ||||||| || | |||||||| Sbjct 27920659 ATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACCAGGGTATTTGTGCGTGGATGGC 27920718 Query 167108 AACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAA 167167 | || ||||| |||||||| | | | |||||||||| |||||||| || | || || Sbjct 27920719 AGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCATGTGGAAA 27920778 Query 167168 CGCTCTCTAA 167177 |||||| ||| Sbjct 27920779 CGCTCTTTAA 27920788 >seq7 Length=35964315 Score = 300 bits (332), Expect = 2e-76 Identities = 340/456 (75%), Gaps = 0/456 (0%) Strand=Plus/Plus Query 165293 TTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTG 165352 |||||||||| || |||||| | || || ||||| |||||||| || || || ||| || Sbjct 24459261 TTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTG 24459320 Query 165353 CTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTC 165412 |||||||||| | || || | | || | || || ||||||| ||| | Sbjct 24459321 CTATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAGTCTG 24459380 Query 165413 AGAACTACGGTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACG 165472 || | ||||| || ||||| |||||||||| || |||||||| || ||||| || | Sbjct 24459381 CTAATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCTCATG 24459440 Query 165473 GGTACTTCGGTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACT 165532 | || || ||||| | || |||||||| || |||||||| || |||| | |||| Sbjct 24459441 GTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTACACT 24459500 Query 165533 TCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCA 165592 ||||| | || || ||||||||||| || ||||||||||||||| | ||| |||| || | Sbjct 24459501 TCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTA 24459560 Query 165593 TGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAA 165652 ||||||||||||| || |||||||| |||||||| ||| | ||||||||||| Sbjct 24459561 TGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCG 24459620 Query 165653 TCATCCCTACTTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATG 165712 | || |||||||||||| | ||||||||| ||| ||||||||||| ||||| | Sbjct 24459621 TTATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATGCACG 24459680 Query 165713 AGCGTAACGCTCACAACTTCCCCCTCGACCTCGCTG 165748 | ||||| |||||||||||||| || ||||| |||| Sbjct 24459681 AACGTAATGCTCACAACTTCCCTCTAGACCTAGCTG 24459716 >seq1 Length=42145699 Score = 170 bits (188), Expect = 2e-37 Identities = 194/259 (75%), Gaps = 1/259 (0%) Strand=Plus/Plus Query 166830 ACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTC 166889 ||||||| |||||||| ||||||||||| | || ||||||| |||||||| || || Sbjct 27067133 ACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGGTCTCAAATATTT 27067192 Query 166890 GGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 166949 ||| |||| ||| ||||| | ||||| |||||||||||||| ||||| || || | Sbjct 27067193 GGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 27067252 Query 166950 GGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 167009 | | | |||| | | | || || | | || || ||||| ||||| ||||| |||||| Sbjct 27067253 GAT-TATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTACGTGCCTATGAC 27067311 Query 167010 TTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAG 167069 || ||||||| ||| | | ||||| || |||||||| ||| | || ||||| ||||| Sbjct 27067312 TTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACTTTCTACACCAAA 27067371 Query 167070 AACATTCTCTTGAATGAGG 167088 || ||||| || || |||| Sbjct 27067372 AATATTCTTTTAAACGAGG 27067390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563658425578880