Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq337 614 6e-171 seq14 614 6e-171 seq4 434 1e-116 seq7 259 5e-64 seq1 176 5e-39 >seq337 Length=135516 Score = 614 bits (680), Expect = 6e-171 Identities = 709/951 (75%), Gaps = 8/951 (1%) Strand=Plus/Minus Query 8288 TCGGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGC---TTC 8343 |||| ||||| || ||| | |||||||| ||| || ||| |||| || || | || Sbjct 1586 TCGGATGGTTCGGTGTTTTGATGATCCCTACC-TTATTGACCGCAAC---TTCCGTATTT 1531 Query 8344 ATTACCGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCT 8403 |||| ||| ||| | ||||||||||| || || || || || || || || || ||| || Sbjct 1530 ATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCT 1471 Query 8404 GGATCTCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCA 8463 || ||| | | || || ||||| || || |||||||| || |||| | ||| || Sbjct 1470 GGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCG 1411 Query 8464 ATTGGCCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAAC 8523 || || | || || ||||| || |||||||| || ||| ||||||| ||| | ||||| Sbjct 1410 ATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAAT 1351 Query 8524 GGTGGTCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGT 8583 || |||||||| |||| | ||| | |||||| | ||||| || | |||||||||| Sbjct 1350 GGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGT 1291 Query 8584 CGTGAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCT 8643 ||||| ||||||||| || ||| || || ||||| |||||||| ||||||||| || Sbjct 1290 CGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCA 1231 Query 8644 GCTCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTC 8703 ||||||||||| |||||| ||||||| ||| | | |||||| |||||||||| ||| Sbjct 1230 GCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTC 1171 Query 8704 TCTGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCT 8763 ||||||||||||||| | || || || ||||| ||||||| |||| |||| |||||||| Sbjct 1170 TCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCG 1111 Query 8764 GAGCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGA 8823 |||||||||||||| ||||| || || |||||| | ||||| |||||||| |||||||| Sbjct 1110 GAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGT 1051 Query 8824 TCTCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACC 8883 || || || || ||||||||||| | || || ||| || | | || ||||| Sbjct 1050 TCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACT 991 Query 8884 GAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATT 8943 |||| |||||| || | || ||||| || ||||||||||| || ||||| |||||| Sbjct 990 GAAAATGAGTCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATT 931 Query 8944 GTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCT 9003 || || ||||| || || |||||||| || |||||||||||||| ||| ||||| ||| Sbjct 930 GTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCT 871 Query 9004 AGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTC 9063 | || || |||||| | ||||| |||||||| || || |||||||| || || | Sbjct 870 CGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTA 811 Query 9064 GGCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGAC 9123 || | || ||||| |||||||| ||||| ||||| |||||||| || | | || Sbjct 810 GGTATTAGTACTATGGCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGAT 751 Query 9124 GGACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATG 9183 | ||||| || || | || || ||||| || | | ||||| || || |||||| Sbjct 750 AGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATG 691 Query 9184 GAAGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCT 9234 ||||| ||||||||| | || || ||||||||||| || ||||| || ||| Sbjct 690 GAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 640 Score = 542 bits (600), Expect = 3e-149 Identities = 719/998 (72%), Gaps = 0/998 (0%) Strand=Plus/Plus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | || |||||| | | | || || || |||||||| || ||||| || Sbjct 8990 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 9049 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | || ||||| ||||||| | || | || || ||| |||| || ||||| ||| Sbjct 9050 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 9109 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994 || || |||||| || || ||| | || ||| || | || ||| |||||| | Sbjct 9110 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTA 9169 Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054 || ||||| || || || ||||| || | | | || ||| | | ||||| ||||| Sbjct 9170 ACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGC 9229 Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114 || || | ||||| ||||| || ||| || | || || || ||| ||||||| Sbjct 9230 CCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTC 9289 Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174 || ||||| || || || || |||| || || |||||||| || ||||| || || | Sbjct 9290 GCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGG 9349 Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234 | || | | || ||||| ||||| || | || ||||| || || || |||||||| Sbjct 9350 TCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTT 9409 Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294 || ||||| || |||||||| ||||| ||| |||||||||||||||||||||| ||| Sbjct 9410 TCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGC 9469 Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354 || || || || || || || | || ||| |||| || ||||||||||||||| | || Sbjct 9470 GTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAAC 9529 Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414 || || ||||||||||||||||| || || | || | || || |||| || ||||| Sbjct 9530 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCAT 9589 Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474 || | || ||||||||||| || | ||||||| || ||||| || ||| ||| Sbjct 9590 GGGGCTACCGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCT 9649 Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534 ||| | ||||||| ||||| || ||||| ||||| ||||||||||| || |||||| Sbjct 9650 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCC 9709 Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594 || || ||||| |||||||| ||||||||| ||| | |||||||||||||| |||||| Sbjct 9710 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 9769 Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654 || || | ||| | |||| | ||||||| | |||| || ||||| || || ||| Sbjct 9770 CCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGT 9829 Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714 || || || || || || || || ||| | || | |||||||||||||||||||| ||| Sbjct 9830 GCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTC 9889 Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774 || || || ||||| ||| | ||||| ||| ||||||| ||||||||| | || || Sbjct 9890 TACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAG 9949 Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || |||| || | ||||| || || ||||| || Sbjct 9950 CCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACC 9987 >seq14 Length=147140 Score = 614 bits (680), Expect = 6e-171 Identities = 709/951 (75%), Gaps = 8/951 (1%) Strand=Plus/Minus Query 8288 TCGGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGC---TTC 8343 |||| ||||| || ||| | |||||||| ||| || ||| |||| || || | || Sbjct 81931 TCGGATGGTTCGGTGTTTTGATGATCCCTACC-TTATTGACCGCAAC---TTCCGTATTT 81876 Query 8344 ATTACCGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCT 8403 |||| ||| ||| | ||||||||||| || || || || || || || || || ||| || Sbjct 81875 ATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCT 81816 Query 8404 GGATCTCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCA 8463 || ||| | | || || ||||| || || |||||||| || |||| | ||| || Sbjct 81815 GGTTCTTTACTTTATGGAAACAATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCG 81756 Query 8464 ATTGGCCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAAC 8523 || || | || || ||||| || |||||||| || ||| ||||||| ||| | ||||| Sbjct 81755 ATCGGATTGCATTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAAT 81696 Query 8524 GGTGGTCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGT 8583 || |||||||| |||| | ||| | |||||| | ||||| || | |||||||||| Sbjct 81695 GGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGT 81636 Query 8584 CGTGAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCT 8643 ||||| ||||||||| || ||| || || ||||| |||||||| ||||||||| || Sbjct 81635 CGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCA 81576 Query 8644 GCTCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTC 8703 ||||||||||| |||||| ||||||| ||| | | |||||| |||||||||| ||| Sbjct 81575 GCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTC 81516 Query 8704 TCTGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCT 8763 ||||||||||||||| | || || || ||||| ||||||| |||| |||| |||||||| Sbjct 81515 TCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCG 81456 Query 8764 GAGCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGA 8823 |||||||||||||| ||||| || || |||||| | ||||| |||||||| |||||||| Sbjct 81455 GAGCACAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGT 81396 Query 8824 TCTCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACC 8883 || || || || ||||||||||| | || || ||| || | | || ||||| Sbjct 81395 TCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACT 81336 Query 8884 GAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATT 8943 |||| |||||| || | || ||||| || ||||||||||| || ||||| |||||| Sbjct 81335 GAAAATGAGTCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATT 81276 Query 8944 GTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCT 9003 || || ||||| || || |||||||| || |||||||||||||| ||| ||||| ||| Sbjct 81275 GTGGCTGCTCACGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCT 81216 Query 9004 AGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTC 9063 | || || |||||| | ||||| |||||||| || || |||||||| || || | Sbjct 81215 CGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTA 81156 Query 9064 GGCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGAC 9123 || | || ||||| |||||||| ||||| ||||| |||||||| || | | || Sbjct 81155 GGTATTAGTACTATGGCATTCAACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGAT 81096 Query 9124 GGACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATG 9183 | ||||| || || | || || ||||| || | | ||||| || || |||||| Sbjct 81095 AGTCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATG 81036 Query 9184 GAAGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCT 9234 ||||| ||||||||| | || || ||||||||||| || ||||| || ||| Sbjct 81035 GAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 80985 Score = 533 bits (590), Expect = 2e-146 Identities = 718/997 (72%), Gaps = 2/997 (0%) Strand=Plus/Plus Query 9816 TTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGAC 9875 |||| || | || |||||| | | | || || || |||||||| || ||||| || | Sbjct 89662 TTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCC 89721 Query 9876 TACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTTG 9935 || | || ||||| ||||||| | || | || || ||| |||| || ||||| |||| Sbjct 89722 TATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTG 89781 Query 9936 TCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTTA 9995 | || |||||| || || ||| | || ||| || | || ||| |||||| | | Sbjct 89782 TAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAA 89841 Query 9996 CAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTC 10055 | ||||| || || || ||||| || | | | || ||| | | ||||| ||||| | Sbjct 89842 CCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCC 89901 Query 10056 CTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTGG 10115 | || | ||||| ||||| || ||| || | || || || ||| ||||||| | Sbjct 89902 CGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCG 89961 Query 10116 CGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGAT 10175 | ||||| || || || || |||| || || |||||||| || ||||| || || | | Sbjct 89962 CTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGT 90021 Query 10176 TAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCA 10235 || | | || ||||| ||||| || | || ||||| || || || |||||||| Sbjct 90022 CTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTT 90081 Query 10236 GTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCG 10295 || ||||| || |||||||| ||||| ||| |||||||||||||||||||||| |||| Sbjct 90082 CCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCG 90141 Query 10296 TCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATC 10355 | || || || ||| | || | || ||| |||| || ||||||||||||||| | || | Sbjct 90142 TAGCAGCTATATTC-GATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACC 90200 Query 10356 CCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACG 10415 | || ||||||||||||||||| || || | || | || || |||| || ||||| | Sbjct 90201 CATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATG 90260 Query 10416 GAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTT 10475 | | || ||||||||||| || | ||||||| || ||||| || ||| |||| Sbjct 90261 GGGCTACCGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTT 90320 Query 10476 TTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCC 10535 || | ||||||| ||||| || ||||| ||||| ||||||||||| || ||||||| Sbjct 90321 TTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCC 90380 Query 10536 AGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTAC 10595 | || ||||| |||||||| ||||||||| ||| | |||||||||||||| ||||||| Sbjct 90381 AAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTAC 90440 Query 10596 CTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTG 10655 | || | ||| | |||| | ||||||| | |||| || ||||| || || |||| Sbjct 90441 CCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTG 90500 Query 10656 CTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCT 10715 | || || || || || || || ||| | || | |||||||||||||||||||| |||| Sbjct 90501 CCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCT 90560 Query 10716 ATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAAC 10775 | || || ||||| ||| | ||||| ||| ||||||| ||||||||| | || || | Sbjct 90561 ACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGC-TCAGATCAGC 90619 Query 10776 CACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 | || |||| || | ||||| || || ||||| || Sbjct 90620 CTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACC 90656 >seq4 Length=40407879 Score = 434 bits (480), Expect = 1e-116 Identities = 593/827 (72%), Gaps = 1/827 (0%) Strand=Plus/Plus Query 9986 AATTTCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTA 10045 |||||| | || ||||| || || || ||||| || | | | || ||| | | ||| Sbjct 27919944 AATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTA 27920003 Query 10046 CTTTGGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGG 10105 || ||||| || || | ||||| ||||| || ||| || | || || || ||| Sbjct 27920004 CTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGG 27920063 Query 10106 GCTTTTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAG 10165 |||| || || ||||| || || || || |||| | || |||||||| || ||||| Sbjct 27920064 ACTTT-GTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAATTTGAA 27920122 Query 10166 CTGGCGAGATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCT 10225 || || | | || | | || ||||| ||||| || | || ||| | || || || Sbjct 27920123 CTTGCTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTAGTCCAATCGCA 27920182 Query 10226 GTTTTTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCG 10285 |||||||| || ||||| || |||||||| ||||| ||| ||||||||||||||||| Sbjct 27920183 GTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCG 27920242 Query 10286 AGTTTCGGCGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGG 10345 ||||| ||||| || || || || || || | || ||| |||| || |||||||||||| Sbjct 27920243 AGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGG 27920302 Query 10346 ACGCTCAATCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCA 10405 ||| | || || || ||||||||||||||||| | || | || | || || |||| Sbjct 27920303 ACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTATTAGGTGTAGCTCTGCTATGC 27920362 Query 10406 GCAATCCACGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACT 10465 || ||||| || | |||||||||||||| || | | ||||||| || ||||| || Sbjct 27920363 GCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGATGGTGATGGTGCAAATACC 27920422 Query 10466 TTCAAAGCTTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGT 10525 || |||||| | |||||||| ||||| || ||||| ||||| | ||||||||| Sbjct 27920423 TTTCGCGCTTTTAACCCAACTCAAGATGAAGAAACTTATTCAATGGTCATTGCTAACCGC 27920482 Query 10526 TTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATG 10585 || |||||||| || ||||| |||||||| |||||||| ||| | |||||||||||| Sbjct 27920483 TTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACATTGGTTACATTTCTTTATG 27920542 Query 10586 CTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTC 10645 || |||||||| || | || | |||| | ||||||| | |||| | ||||| Sbjct 27920543 CTATTTGTACCCGTCACCAGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTCTG 27920602 Query 10646 AATCTTCGTGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTT 10705 || || | ||| || || || | || || || ||| | || | ||||||||||||||| Sbjct 27920603 AACCTACATGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTT 27920662 Query 10706 GAGACGTTCTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCA 10765 ||||| ||||| || || ||||| ||| | ||| | ||| || |||| ||||||||| | Sbjct 27920663 GAGACTTTCTACACCAAAAATATTCTTTTAAACCAGGGTATTTGTGCGTGGATGGCAGCT 27920722 Query 10766 GTTGACCAACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || || || |||| || | ||||| || || ||||| || Sbjct 27920723 CAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACC 27920769 >seq7 Length=35964315 Score = 259 bits (286), Expect = 5e-64 Identities = 332/458 (72%), Gaps = 0/458 (0%) Strand=Plus/Plus Query 8773 ATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTT 8832 ||| | ||||| || || |||||| | ||||| |||||||| |||||||| || || || Sbjct 24459257 ATCATTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTC 24459316 Query 8833 TCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAG 8892 || ||||||||||| | || || | | || | | || ||||| |||| ||| Sbjct 24459317 AGTGCTATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAG 24459376 Query 8893 TCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCT 8952 ||| || | || ||||| || ||||||||||| | | ||| |||||||| || ||| Sbjct 24459377 TCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCT 24459436 Query 8953 CATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTG 9012 ||||| || |||||||| || |||||||||||||| ||| ||||| ||| | || Sbjct 24459437 CATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTA 24459496 Query 9013 CATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCG 9072 || |||||| | ||||| |||||||| || || |||||||| || || | || | Sbjct 24459497 CACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGT 24459556 Query 9073 ACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGA 9132 || ||||| |||||||| ||||| ||||| |||||||| || | | || | ||||| Sbjct 24459557 ACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 24459616 Query 9133 CGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATG 9192 || || | || || ||||| || | ||||| || || ||||||||||| ||| Sbjct 24459617 CGCGTTATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATG 24459676 Query 9193 CACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGC 9230 |||||| | || || ||||||||||| || ||||| || Sbjct 24459677 CACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 24459714 >seq1 Length=42145699 Score = 176 bits (194), Expect = 5e-39 Identities = 194/257 (75%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 10484 ACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTT 10543 ||||||| ||||| || ||||| ||||| | ||||||||| || ||||| || |||||| Sbjct 27067133 ACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGGTCTCAAATATTT 27067192 Query 10544 GGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATG 10603 || |||||||| ||||||| | ||| | |||||||||||||| |||||||| || | Sbjct 27067193 GGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 27067252 Query 10604 GGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGAT 10663 | | | |||| || ||||||| | | || || ||||| || || ||||| || || Sbjct 27067253 GAT-TATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTACGTGCCTATGAC 27067311 Query 10664 TTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATACGAAG 10723 || | || || || ||| | || | ||||||||||||||| |||| ||||| || || Sbjct 27067312 TTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACTTTCTACACCAAA 27067371 Query 10724 AATATCCTTCTGAACGA 10740 ||||| ||| | ||||| Sbjct 27067372 AATATTCTTTTAAACGA 27067388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516477824328000