Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq337 722 0.0 seq14 722 0.0 seq4 434 1e-116 seq7 363 2e-95 seq1 167 3e-36 seq8 87.8 2e-12 seq6 84.2 2e-11 >seq337 Length=135516 Score = 722 bits (800), Expect = 0.0 Identities = 755/990 (76%), Gaps = 6/990 (1%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || || |||||| | || |||||||| ||||| ||||| | || |||||||| || || Sbjct 1626 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 1567 Query 160936 ATGATTCC---CTGCTTGCTCGCTGCTACCATTTGTTTCATCATTGCCTTCGTTGGTGCT 160992 ||||| || || ||| ||| || || | | | | ||| |||||| | | |||| Sbjct 1566 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATC---GCCTTCATCGCTGCT 1510 Query 160993 CCCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAAC 161052 || || || || || || || |||||||| || || ||||||| | | ||||||||| Sbjct 1509 CCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAAC 1450 Query 161053 AACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCC 161112 || || || ||||||||| |||| ||| ||||| || ||||| |||| || ||||| Sbjct 1449 AATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCA 1390 Query 161113 ATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTT 161172 || |||||||| ||| | | || |||||| | ||||| || ||||||| | || || Sbjct 1389 ATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATT 1330 Query 161173 GTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTAC 161232 || | |||||| | |||| | | ||| ||||||||||||||||||||| || | Sbjct 1329 GTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 1270 Query 161233 CGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGT 161292 |||||||| ||||| ||||||||| || ||||| || |||||||| || || || | | Sbjct 1269 CGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 1210 Query 161293 GCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGC 161352 || || ||| || | |||||| | |||||||| ||||||||||| |||||| | || Sbjct 1209 GCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 1150 Query 161353 ATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCAC 161412 || |||||||| ||||||| ||| |||| ||||| || ||||||||||| || ||||| Sbjct 1149 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCAT 1090 Query 161413 CCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCAC 161472 || || || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| Sbjct 1089 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 1030 Query 161473 GGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTAT 161532 ||||| |||| |||||| || | | |||||||| ||||| ||||| || | Sbjct 1029 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAG 970 Query 161533 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTC 161592 |||||||| || ||||||||||||||||| || ||||| || ||||| ||||| || || Sbjct 969 GGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTT 910 Query 161593 GGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTT 161652 ||||| | || |||||||| ||| ||||||||||| || || | ||||||||| | Sbjct 909 GGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 850 Query 161653 GCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTC 161712 |||||||||||||| || || |||||||||||||| | || | || || ||||||||| Sbjct 849 GCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTC 790 Query 161713 AACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAAC 161772 ||||| ||||| ||||| |||||||| ||| | ||||||||||| ||| ||||| || Sbjct 789 AACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAAT 730 Query 161773 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAAT 161832 || ||||| || | ||||||||||| |||||| |||||||| |||||||| || ||| Sbjct 729 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 670 Query 161833 GCTCACAACTTCCCTCTTGACCTTGCTGCT 161862 ||||||||||||||||| ||||| |||||| Sbjct 669 GCTCACAACTTCCCTCTAGACCTAGCTGCT 640 Score = 598 bits (662), Expect = 5e-166 Identities = 746/1016 (73%), Gaps = 6/1016 (1%) Strand=Plus/Plus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | ||||||||| | ||| ||||||||||||||||| || ||||| || Sbjct 8990 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 9049 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | || ||||| ||||||| | ||| | ||||||||| |||| ||||||||||| Sbjct 9050 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 9109 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT-GCAAACTTTCT 162295 || || ||||||||| || ||| | || ||||||||| | || ||| |||| ||||| Sbjct 9110 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCT 9167 Query 162296 TA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGG 162354 || | ||||| ||||| ||||| || | | | | || ||| | |||| ||||||| Sbjct 9168 TAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGG 9227 Query 162355 GTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTG 162414 | || || | || ||||| || | || ||||| ||| | || || || |||||||||| Sbjct 9228 GCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTG 9287 Query 162415 TGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC 162474 | || ||||| || || |||||||| |||||||||||| | || || |||||||| || | Sbjct 9288 TCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 9347 Query 162475 GA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTC 162533 | || || | | || ||||| ||||| ||| | ||||| ||||| || || || || Sbjct 9348 GGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTT 9406 Query 162534 GTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTC 162593 ||| || || ||||| ||||| |||||||||| |||||||| || ||| || Sbjct 9407 GTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTT 9466 Query 162594 GGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTA 162653 || || ||||| || || ||||| | || ||| ||||||| || ||||| |||||| | Sbjct 9467 GGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTG 9526 Query 162654 AATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATT 162713 || || ||||| |||||||| || || || | | || | || |||| | ||||| Sbjct 9527 AACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATC 9586 Query 162714 CATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAA 162773 ||||| | || || ||||| || || | ||||||||| || ||||| || || Sbjct 9587 CATGGGGCTACCGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGC 9646 Query 162774 GCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGG 162833 || ||| || | || || | |||||||| ||||| ||||| ||||| |||||||| ||| Sbjct 9647 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGG 9706 Query 162834 TCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTT 162893 || || || || ||| |||||||| || || |||||||| |||||||||||||| ||| Sbjct 9707 TCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTT 9766 Query 162894 GTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTT 162953 || ||||||| ||| | |||| ||| |||| || | |||| || ||||| || || Sbjct 9767 GTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTA 9826 Query 162954 CGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACG 163013 ||||| || ||||| || || || ||| | ||||| || ||||| ||||| |||||||| Sbjct 9827 CGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 9886 Query 163014 TTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGAC 163073 ||||| || || || |||||| | || || || |||| || ||| | ||| | ||| Sbjct 9887 TTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGAT 9946 Query 163074 CAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 || |||||||| || || | |||||||| ||||| | ||| | || |||||||| Sbjct 9947 CAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 10002 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| |||||||||||||||||||||| ||| |||||| ||| | ||| ||||||| ||| Sbjct 63691 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACAGGTTCAAAT 63632 Query 157751 CCTGTCACCCCGACTTATCAA 157771 ||||||| ||| || ||| || Sbjct 63631 CCTGTCATCCCTACCTATTAA 63611 >seq14 Length=147140 Score = 722 bits (800), Expect = 0.0 Identities = 755/990 (76%), Gaps = 6/990 (1%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || || |||||| | || |||||||| ||||| ||||| | || |||||||| || || Sbjct 81971 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 81912 Query 160936 ATGATTCC---CTGCTTGCTCGCTGCTACCATTTGTTTCATCATTGCCTTCGTTGGTGCT 160992 ||||| || || ||| ||| || || | | | | ||| |||||| | | |||| Sbjct 81911 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATC---GCCTTCATCGCTGCT 81855 Query 160993 CCCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAAC 161052 || || || || || || || |||||||| || || ||||||| | | ||||||||| Sbjct 81854 CCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAAC 81795 Query 161053 AACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCC 161112 || || || ||||||||| |||| ||| ||||| || ||||| |||| || ||||| Sbjct 81794 AATATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCA 81735 Query 161113 ATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTT 161172 || |||||||| ||| | | || |||||| | ||||| || ||||||| | || || Sbjct 81734 ATTTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATT 81675 Query 161173 GTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTAC 161232 || | |||||| | |||| | | ||| ||||||||||||||||||||| || | Sbjct 81674 GTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 81615 Query 161233 CGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGT 161292 |||||||| ||||| ||||||||| || ||||| || |||||||| || || || | | Sbjct 81614 CGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 81555 Query 161293 GCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGC 161352 || || ||| || | |||||| | |||||||| ||||||||||| |||||| | || Sbjct 81554 GCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 81495 Query 161353 ATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCAC 161412 || |||||||| ||||||| ||| |||| ||||| || ||||||||||| || ||||| Sbjct 81494 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCAT 81435 Query 161413 CCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCAC 161472 || || || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| Sbjct 81434 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 81375 Query 161473 GGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTAT 161532 ||||| |||| |||||| || | | |||||||| ||||| ||||| || | Sbjct 81374 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAG 81315 Query 161533 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTC 161592 |||||||| || ||||||||||||||||| || ||||| || ||||| ||||| || || Sbjct 81314 GGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTT 81255 Query 161593 GGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTT 161652 ||||| | || |||||||| ||| ||||||||||| || || | ||||||||| | Sbjct 81254 GGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 81195 Query 161653 GCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTC 161712 |||||||||||||| || || |||||||||||||| | || | || || ||||||||| Sbjct 81194 GCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTC 81135 Query 161713 AACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAAC 161772 ||||| ||||| ||||| |||||||| ||| | ||||||||||| ||| ||||| || Sbjct 81134 AACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAAT 81075 Query 161773 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAAT 161832 || ||||| || | ||||||||||| |||||| |||||||| |||||||| || ||| Sbjct 81074 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 81015 Query 161833 GCTCACAACTTCCCTCTTGACCTTGCTGCT 161862 ||||||||||||||||| ||||| |||||| Sbjct 81014 GCTCACAACTTCCCTCTAGACCTAGCTGCT 80985 Score = 585 bits (648), Expect = 3e-162 Identities = 744/1015 (73%), Gaps = 8/1015 (1%) Strand=Plus/Plus Query 162118 TTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGAC 162177 ||||| | | ||||||||| | ||| ||||||||||||||||| || ||||| || | Sbjct 89662 TTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCC 89721 Query 162178 TTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTCG 162237 | | || ||||| ||||||| | ||| | ||||||||| |||| ||||||||||| | Sbjct 89722 TATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTG 89781 Query 162238 TCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT-GCAAACTTTCTT 162296 | || ||||||||| || ||| | || ||||||||| | || ||| |||| |||||| Sbjct 89782 TAACTTCTTGGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTT 89839 Query 162297 A-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGG 162355 | | ||||| ||||| ||||| || | | | | || ||| | |||| |||||||| Sbjct 89840 AACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGG 89899 Query 162356 TCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGT 162415 || || | || ||||| || | || ||||| ||| | || || || ||||||||||| Sbjct 89900 CCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGT 89959 Query 162416 GGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACG 162475 || ||||| || || |||||||| |||||||||||| | || || |||||||| || || Sbjct 89960 CGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 90019 Query 162476 A-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCG 162534 || || | | || ||||| ||||| ||| | ||||| ||||| || || || || | Sbjct 90020 GTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTG 90078 Query 162535 TTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCG 162594 || || || ||||| ||||| |||||||||| |||||||| || ||| || | Sbjct 90079 TTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTG 90138 Query 162595 GGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAA 162654 | || ||||| || ||| |||| | || ||| ||||||| || ||||| |||||| | | Sbjct 90139 GCGTAGCAGCTATATTC-GATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGA 90197 Query 162655 ATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTC 162714 | || ||||| |||||||| || || || | | || | || |||| | ||||| | Sbjct 90198 ACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCC 90257 Query 162715 ATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAG 162774 |||| | || || ||||| || || | ||||||||| || ||||| || || | Sbjct 90258 ATGGGGCTACCGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCG 90317 Query 162775 CATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGT 162834 | ||| || | || || | |||||||| ||||| ||||| ||||| |||||||| |||| Sbjct 90318 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGT 90377 Query 162835 CACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTG 162894 | || || || ||| |||||||| || || |||||||| |||||||||||||| |||| Sbjct 90378 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 90437 Query 162895 TTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTC 162954 | ||||||| ||| | |||| ||| |||| || | |||| || ||||| || || | Sbjct 90438 TACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTAC 90497 Query 162955 GTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGT 163014 |||| || ||||| || || || ||| | ||||| || ||||| ||||| |||||||| | Sbjct 90498 GTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTT 90557 Query 163015 TCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACC 163074 |||| || || || |||||| | || || || |||| || ||| | ||| | || | Sbjct 90558 TCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGC-TCAGATC 90616 Query 163075 AACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 | |||||||| || || | |||||||| ||||| | ||| | || |||||||| Sbjct 90617 AGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 90671 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| |||||||||||||||||||||| ||| |||||| ||| | ||| ||||||| ||| Sbjct 7368 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACAGGTTCAAAT 7309 Query 157751 CCTGTCACCCCGACTTATCAA 157771 ||||||| ||| || ||| || Sbjct 7308 CCTGTCATCCCTACCTATTAA 7288 >seq4 Length=40407879 Score = 434 bits (480), Expect = 1e-116 Identities = 609/846 (72%), Gaps = 8/846 (1%) Strand=Plus/Plus Query 162288 AACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCT 162346 || ||||||| | ||||| ||||| ||||| || | | | | || ||| | |||| Sbjct 27919943 AAATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCT 27920002 Query 162347 TCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTG 162406 |||||||| || || | || ||||| || | || ||||| ||| | || || || || Sbjct 27920003 ACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTG 27920062 Query 162407 GACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGA 162466 |||||| || || ||||| || || |||||||| ||| |||||||| | || || ||||| Sbjct 27920063 GACTTT-GTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAATTTGA 27920121 Query 162467 ACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTG 162525 ||| || || || || | | || ||||| ||||| ||| | ||||| |||| || | Sbjct 27920122 ACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTAGTCCAATCG 27920180 Query 162526 CTGTATTCGTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCAC 162585 | || || ||| || || ||||| ||||| |||||||||| |||||||| || | Sbjct 27920181 CAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGC 27920240 Query 162586 CGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACT 162645 || || || || ||||| || || ||||| | || ||| ||||||| || ||||| | Sbjct 27920241 CGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATT 27920300 Query 162646 GGACGCTAAATCCTTTTCACATGATGGGCGTAGC-AG-GTATCCTTGGTGGTGCATTGCT 162703 ||||| | || || ||||| |||||||| || || || |||| | |||| || |||| Sbjct 27920301 GGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTAT--TAGGTGTAGCTCTGCT 27920358 Query 162704 CTCTGCTATTCATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAA 162763 | ||||| ||||| | || || ||||| || || | |||||||| || ||||| Sbjct 27920359 ATGCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGATGGTGATGGTGCAAA 27920418 Query 162764 CACTTTTAAAGCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAA 162823 || ||| || ||| || | || || || |||||||| ||||| ||||| | ||| || Sbjct 27920419 TACCTTTCGCGCTTTTAACCCAACTCAAGATGAAGAAACTTATTCAATGGTCATTGCTAA 27920478 Query 162824 CCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTT 162883 |||||| ||||| || || || ||| |||||||| || || | |||||| |||||||| Sbjct 27920479 CCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACATTGGTTACATTTCTT 27920538 Query 162884 TATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGC 162943 |||||| ||||| ||||||| || | |||| ||| |||| || | |||| | || Sbjct 27920539 TATGCTATTTGTACCCGTCACCAGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGC 27920598 Query 162944 TCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGA 163003 ||| || || | ||| || ||||| | || || ||| | ||||| || ||||| ||||| Sbjct 27920599 TCTGAACCTACATGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGA 27920658 Query 163004 GTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGC 163063 |||||||| ||||| || || || |||||| | || | || || | || ||| | || Sbjct 27920659 ATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACCAGGGTATTTGTGCGTGGATGGC 27920718 Query 163064 ACCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAA 163123 | | ||| || |||||||| || || | |||||||| ||||| | ||| | || || Sbjct 27920719 AGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCATGTGGAAA 27920778 Query 163124 CGCTCT 163129 |||||| Sbjct 27920779 CGCTCT 27920784 >seq7 Length=35964315 Score = 363 bits (402), Expect = 2e-95 Identities = 353/454 (78%), Gaps = 0/454 (0%) Strand=Plus/Plus Query 161407 ATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCA 161466 ||||| || || || ||| | || ||||| ||||| || |||||||| || |||||||| Sbjct 24459263 ATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCT 24459322 Query 161467 ATGCACGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAG 161526 ||||| ||||| |||| |||| | || | | |||||||| ||||| ||||| Sbjct 24459323 ATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCT 24459382 Query 161527 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGG 161586 || | |||||||| || ||||||||||||| || || ||||| || ||||| || || Sbjct 24459383 AATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCTCATGGT 24459442 Query 161587 TACTTCGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTC 161646 || || ||||| | || |||||||| ||| ||||||||||| | || | |||||| Sbjct 24459443 TATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTACACTTC 24459502 Query 161647 TTCCTTGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATG 161706 ||| | |||||||||||||| || || |||||||||||||| | || | || || ||| Sbjct 24459503 TTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATG 24459562 Query 161707 GCATTCAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTT 161766 ||||||||||| ||||||||||| |||||||| ||| | ||||||||||| ||| ||| Sbjct 24459563 GCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTT 24459622 Query 161767 ATCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAG 161826 || || || ||||| || | |||||||||| |||||| |||||||| |||||||| Sbjct 24459623 ATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAA 24459682 Query 161827 CGCAATGCTCACAACTTCCCTCTTGACCTTGCTG 161860 || |||||||||||||||||||| ||||| |||| Sbjct 24459683 CGTAATGCTCACAACTTCCCTCTAGACCTAGCTG 24459716 >seq1 Length=42145699 Score = 167 bits (184), Expect = 3e-36 Identities = 199/269 (74%), Gaps = 1/269 (0%) Strand=Plus/Plus Query 162774 GCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGG 162833 || ||| || | || || | |||||||| ||||| ||||| | ||| |||||||| ||| Sbjct 27067121 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGG 27067180 Query 162834 TCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTT 162893 || || || || ||| |||||||| || || ||||||| |||||||||||||| ||| Sbjct 27067181 TCTCAAATATTTGGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTT 27067240 Query 162894 GTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTT 162953 || ||||||| | | | |||| | | |||| || | | || || ||||| || || Sbjct 27067241 GTACCCGTCACCGAT-TATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTA 27067299 Query 162954 CGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACG 163013 ||||| || ||||| | || || ||| | ||||| || ||||| ||||| ||| |||| Sbjct 27067300 CGTGCCTATGACTTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACT 27067359 Query 163014 TTCTATACAAAGAACATTCTTCTGAATGA 163042 ||||| || || || |||||| | || || Sbjct 27067360 TTCTACACCAAAAATATTCTTTTAAACGA 27067388 >seq8 Length=40689132 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 161470 CACGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAAC 161529 |||||||| |||| |||||| || | | |||||||| ||||| ||||| || Sbjct 1980306 CACGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAAT 1980247 Query 161530 TATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTAC 161589 | |||||||| || ||||||||||||| ||| || ||||| || ||||| ||||| || Sbjct 1980246 AAGGGTTACAAATTTGGTCAAGAAGAAGGGACTTATAACATTGTGGCTGCTCACGGTTAT 1980187 Query 161590 TTCGGT 161595 || ||| Sbjct 1980186 TTTGGT 1980181 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 161470 CACGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAAC 161529 |||||||| |||| |||||| || | | ||||||| ||||| ||||| || Sbjct 30663754 CACGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCAGTGAAAATGAGTCTGCTAAT 30663695 Query 161530 TATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTAC 161589 | |||||||| || ||||||||||||| ||| || ||||| || ||||| ||||| || Sbjct 30663694 AAGGGTTACAAATTAGGTCAAGAAGAAGGGACTTATAACATTGTGGCTGCTCACGGTTAT 30663635 Query 161590 TTCGGT 161595 || ||| Sbjct 30663634 TTTGGT 30663629 >seq6 Length=36014550 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 158332 GACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGC 158391 |||||| |||||||| ||| || ||||| | || |||| || ||||||||| Sbjct 390125 GACGACGTCTACATCCTCGACCACGCCGAGGAGGAAGGGATCGAGCTGCCCTACTCGTGC 390066 Query 158392 CGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGC 158451 || || ||| | || || || || || || || |||||||| |||| | | ||||| | Sbjct 390065 CGCGCCGGCTCCTGCTCCTCCTGCGCCGGCAAGCTCGTCTCCGGCAGCATCGACCAGTCC 390006 Query 158452 GACCAGTCCTTCCTGGACGATGACCA 158477 |||||| |||||| ||||| ||||| Sbjct 390005 GACCAGAGCTTCCTCGACGACGACCA 389980 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 161662 CCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAAT 161721 ||||| || || || || ||||||| | || | || | ||||| || | || | Sbjct 25018328 CCTGTAGTAGGGATAAGGGTCACTGCGTTAGGTATTAGTCCTCTGGCAGTCGTCGTGGAC 25018269 Query 161722 GGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCA 161781 | | ||| |||| ||| | | | ||| ||||| | ||| ||||| || |||| ||| Sbjct 25018268 GCCTCCAATTTCATCCAATATGTAGTTCATAGTAAAGGTCGCGTTATTAAGACCTCGGCT 25018209 Query 161782 GACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAAC 161841 || ||||||| ||| ||| || | |||||| |||||||| | || ||||||||| Sbjct 25018208 GATACCATCAACCGGGCTAATCTCGGTA-GGAAGTAATGCACGACGGTAAGGCTCACAAC 25018150 Query 161842 TTCCCTCTTGACCTTGCTGCT 161862 ||| |||| || || |||||| Sbjct 25018149 TTCGCTCTAGAACTAGCTGCT 25018129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547744892614920