Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq337 567 9e-157 seq14 556 2e-153 seq4 450 2e-121 seq7 250 3e-61 seq1 167 3e-36 >seq337 Length=135516 Score = 567 bits (628), Expect = 9e-157 Identities = 736/1016 (72%), Gaps = 6/1016 (1%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | ||||| ||||| |||| || |||||||| || ||||| Sbjct 10002 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 9943 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | ||||| ||| ||||| | ||| || || || || || || || |||||||| ||| Sbjct 9942 TGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 9883 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || |||||||| ||||| | ||| || ||||| || |||||||| ||||| ||| Sbjct 9882 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 9823 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || ||||| || |||| | || || | ||| |||| | ||| | || || ||||| Sbjct 9822 TTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTACAAAT 9763 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 |||||||||||||| ||||| | ||||| ||| |||| |||||||||||| ||||| Sbjct 9762 AGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 9703 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 || ||||| || || |||||||||||||| ||||| |||| || | | || || | Sbjct 9702 AAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCGCGG 9643 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || || ||||| |||||||||||| | |||||||| || || || | || ||||| Sbjct 9642 AAGGTATTTGCACCATCACCATCTTCGAATAGAGTGTTTTCTACGGTAGCCCCATGGATA 9583 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189 || | ||||| ||| | || | | || ||||| ||||||||||| |||||||| | | Sbjct 9582 GCGCATAGCAGAGCTGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAAC 9523 Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249 ||||| ||||| || || || | ||| || | |||| |||||| ||||| || ||||| Sbjct 9522 GTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATCGAAATATAGCTGCTACGCCAAAA 9463 Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309 |||||||||||||||| || ||||| || ||||| || || || || |||||| Sbjct 9462 CTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGAAACAAAA 9403 Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369 || ||||| || |||||||| | ||| ||||| || || || | | || ||| ||| Sbjct 9402 ACTGCGATTGGACCAGAGAATGAAATTGCATTATAAGGCCGCAATTGAACAGACCGAGCA 9343 Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429 | || |||||||| | ||||||||| || || ||||| || || |||||||| |||||| Sbjct 9342 AGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCGACAAAA 9283 Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489 | ||| || || || | ||| ||| | ||||| || || ||||| || ||||| Sbjct 9282 GTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCGGGCCCCAT 9223 Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549 ||||| | | ||| || | | | | ||||| || || || || || || | |||| Sbjct 9222 AGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGGTTAAGAAA 9163 Query 102550 TTAGCACCTTCAAGGTA---ACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAAC 102606 || |||||| | || ||||| | | || ||||||||||| ||||| |||| Sbjct 9162 TTGCAACCTTCCAAATAGGAACTAGCC---AATCCATGGGTATACCAAGAAGTTACAAAA 9106 Query 102607 GTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCA 102666 || || || |||| ||| ||||| | |||| ||||||| ||||| || | ||| || Sbjct 9105 GTAGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAATAGGCCG 9046 Query 102667 GACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722 ||||| || ||||| || || || || | | | |||||| |||| || ||||| Sbjct 9045 GACCATCCTACAAAAACGAAACGGTCCCTTCGTAACCAGTCGTCCATAATATCAAA 8990 Score = 542 bits (600), Expect = 4e-149 Identities = 721/1007 (72%), Gaps = 3/1007 (0%) Strand=Plus/Plus Query 103171 AGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAG 103230 |||||| ||||| || |||||||||||||| ||||| |||||||| ||||||||||| || Sbjct 640 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 699 Query 103231 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGAT 103290 | ||| ||||||| | || ||||| || || | || ||||| |||| ||||| | Sbjct 700 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 759 Query 103291 GGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGT 103350 || |||||||| |||||||| || |||||||| ||||| || |||| ||| | || || Sbjct 760 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 819 Query 103351 GAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTT 103410 ||||||||| || ||||| || | |||||||| Sbjct 820 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 879 Query 103411 GAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTA 103470 ||| || ||||||||||| || ||||| || ||||| ||||| || || ||||| || Sbjct 880 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 939 Query 103471 TGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTC 103530 |||||||| ||||| || || |||||||| | || ||| ||| ||||||| || || Sbjct 940 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 999 Query 103531 AC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGA 103589 | || | | | | || || || | ||||| |||||||||||||| || ||||| |||| Sbjct 1000 CCTGATCAAACTA-GAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGA 1058 Query 103590 AGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGA 103649 | || ||||| || || | |||||| || || ||||| || ||||| || || || |||| Sbjct 1059 ATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGA 1118 Query 103650 AGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAAC 103709 | || | ||| ||||||| || || || || || ||||||||| |||| ||||| | Sbjct 1119 ATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTC 1178 Query 103710 CTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATG 103769 ||||||||| || || | |||||| || || | ||||| ||||||||||| || |||| Sbjct 1179 CTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATG 1238 Query 103770 CGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATAT 103829 | ||| ||||| |||||||| ||||||||| | | |||||||||||| ||||||| Sbjct 1239 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATAT 1298 Query 103830 ATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACA 103889 | | | |||| | |||||| | || | || | ||||||| || || || | Sbjct 1299 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATA 1358 Query 103890 GCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGG 103949 ||| ||||||| |||||| ||||||||||| || || || || | || || || | Sbjct 1359 ACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAG 1418 Query 103950 AGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGG 104009 | | |||| || |||||||| || || ||||| || || | | ||||||| || | Sbjct 1419 AAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAG 1478 Query 104010 GTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAAGCAGA 104069 | |||||||| || || ||||| || ||||| || || | ||| || | || || | Sbjct 1479 GCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGG 1538 Query 104070 TGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGGT 104129 ||||| | ||| | || |||||||||| ||||||||||| || | || ||||||| Sbjct 1539 AAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGT 1598 Query 104130 TGTTTGTCGATGTAACCCACTCGCAGAAGTTATCCCACGAGGATTGT 104176 | | || || | ||| | ||||||| | ||||| ||| |||| Sbjct 1599 TTTCGGTGCTAGTTATCCAGTTGCAGAAGCGACCCCAC-AGGCTTGT 1644 >seq14 Length=147140 Score = 556 bits (616), Expect = 2e-153 Identities = 736/1016 (72%), Gaps = 10/1016 (1%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATC- 101768 |||||||| || | ||| | ||||| ||||| |||| || |||||||| || ||||| Sbjct 90671 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCT 90612 Query 101769 GACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGT 101828 || | ||||| ||| ||||| | ||| || || || || || || || |||||||| || Sbjct 90611 GA--GCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGT 90554 Query 101829 CTCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAG 101888 ||| || || |||||||| ||||| | ||| || ||||| || |||||||| ||||| || Sbjct 90553 CTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAG 90494 Query 101889 GTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAA 101948 ||| ||||| || |||| | || || | ||| |||| | ||| | || || ||||| Sbjct 90493 GTTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTACAAA 90434 Query 101949 GAGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCA 102008 |||||||||||||| ||||| | ||||| ||| |||| |||||||||||| ||||| Sbjct 90433 TAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCA 90374 Query 102009 GAAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTT 102068 || ||||| || || |||||||||||||| ||||| |||| || | | || || Sbjct 90373 AAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCGCG 90314 Query 102069 GAAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGAT 102128 ||| || ||||| |||||||||||| | |||||||| || || || | || ||||| Sbjct 90313 GAAGGTATTTGCACCATCACCATCTTCGAATAGAGTGTTTTCTACGGTAGCCCCATGGAT 90254 Query 102129 TGCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAG 102188 || | ||||| ||| | || | | || ||||| ||||||||||| |||||||| | Sbjct 90253 AGCGCATAGCAGAGCTGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAA 90194 Query 102189 CGTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAA 102248 |||||| ||||| || || || | ||| || | |||| ||||| ||||| || ||||| Sbjct 90193 CGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATC-GAATATAGCTGCTACGCCAAA 90135 Query 102249 CGAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAA 102308 |||||||||||||||| || ||||| || ||||| || || || || ||||| Sbjct 90134 ACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGAAACAAA 90075 Query 102309 AACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGC 102368 ||| ||||| || |||||||| | ||| ||||| || || || | | || ||| ||| Sbjct 90074 AACTGCGATTGGACCAGAGAATGAAATTGCATTATAAGGCCGCAATTGAACAGACCGAGC 90015 Query 102369 CAACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAA 102428 | || |||||||| | ||||||||| || || ||||| || || |||||||| ||||| Sbjct 90014 AAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCGACAAA 89955 Query 102429 AGCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCA 102488 || ||| || || || | ||| ||| | ||||| || || ||||| || ||||| Sbjct 89954 AGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCGGGCCCCA 89895 Query 102489 AAGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAA 102548 ||||| | | ||| || | | | | ||||| || || || || || || | ||| Sbjct 89894 TAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGGTTAAGAA 89835 Query 102549 ATTAGCACCTTC---AAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAA 102605 ||| |||||| | | ||||| || | || ||||||||||| ||||| |||| Sbjct 89834 ATTGCAACCTTCCAAATAGGAACTA---GCCAATCCATGGGTATACCAAGAAGTTACAAA 89778 Query 102606 CGTCGTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCC 102665 || || || |||| ||| ||||| | |||| ||||||| ||||| || | ||| || Sbjct 89777 AGTAGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAATAGGCC 89718 Query 102666 AGACCAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAA 102721 ||||| || ||||| || || || || | | | |||||| |||| || |||| Sbjct 89717 GGACCATCCTACAAAAACGAAACGGTCCCTTCGTAACCAGTCGTCCATAATATCAA 89662 Score = 542 bits (600), Expect = 4e-149 Identities = 721/1007 (72%), Gaps = 3/1007 (0%) Strand=Plus/Plus Query 103171 AGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAG 103230 |||||| ||||| || |||||||||||||| ||||| |||||||| ||||||||||| || Sbjct 80985 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 81044 Query 103231 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGAT 103290 | ||| ||||||| | || ||||| || || | || ||||| |||| ||||| | Sbjct 81045 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 81104 Query 103291 GGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGT 103350 || |||||||| |||||||| || |||||||| ||||| || |||| ||| | || || Sbjct 81105 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 81164 Query 103351 GAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTT 103410 ||||||||| || ||||| || | |||||||| Sbjct 81165 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 81224 Query 103411 GAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTA 103470 ||| || ||||||||||| || ||||| || ||||| ||||| || || ||||| || Sbjct 81225 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 81284 Query 103471 TGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTC 103530 |||||||| ||||| || || |||||||| | || ||| ||| ||||||| || || Sbjct 81285 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 81344 Query 103531 AC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGA 103589 | || | | | | || || || | ||||| |||||||||||||| || ||||| |||| Sbjct 81345 CCTGATCAAACTA-GAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGA 81403 Query 103590 AGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGA 103649 | || ||||| || || | |||||| || || ||||| || ||||| || || || |||| Sbjct 81404 ATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGA 81463 Query 103650 AGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAAC 103709 | || | ||| ||||||| || || || || || ||||||||| |||| ||||| | Sbjct 81464 ATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTC 81523 Query 103710 CTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATG 103769 ||||||||| || || | |||||| || || | ||||| ||||||||||| || |||| Sbjct 81524 CTTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATG 81583 Query 103770 CGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATAT 103829 | ||| ||||| |||||||| ||||||||| | | |||||||||||| ||||||| Sbjct 81584 CAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATAT 81643 Query 103830 ATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACA 103889 | | | |||| | |||||| | || | || | ||||||| || || || | Sbjct 81644 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATA 81703 Query 103890 GCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGG 103949 ||| ||||||| |||||| ||||||||||| || || || || | || || || | Sbjct 81704 ACCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAG 81763 Query 103950 AGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGG 104009 | | |||| || |||||||| || || ||||| || || | | ||||||| || | Sbjct 81764 AAGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAG 81823 Query 104010 GTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAAGCAGA 104069 | |||||||| || || ||||| || ||||| || || | ||| || | || || | Sbjct 81824 GCTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGG 81883 Query 104070 TGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGGT 104129 ||||| | ||| | || |||||||||| ||||||||||| || | || ||||||| Sbjct 81884 AAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGT 81943 Query 104130 TGTTTGTCGATGTAACCCACTCGCAGAAGTTATCCCACGAGGATTGT 104176 | | || || | ||| | ||||||| | ||||| ||| |||| Sbjct 81944 TTTCGGTGCTAGTTATCCAGTTGCAGAAGCGACCCCAC-AGGCTTGT 81989 >seq4 Length=40407879 Score = 450 bits (498), Expect = 2e-121 Identities = 609/844 (72%), Gaps = 5/844 (1%) Strand=Plus/Minus Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769 |||||||| || | ||| | ||||| ||||| |||| || |||||||| || ||||| Sbjct 27920784 AGAGCGTTTCCACATGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 27920725 Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829 | ||||| ||| |||| | ||| | || || || || || || |||||||| ||| Sbjct 27920724 TGAGCTGCCATCCACGCACAAATACCCTGGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 27920665 Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889 || || || |||||||| ||||| | ||| || ||||| | |||||||| ||| | ||| Sbjct 27920664 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAATGAAGTCATAGGCATGTAGG 27920605 Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949 || ||||| | |||| | || || | ||| |||| | || | || || ||||| Sbjct 27920604 TTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACTGGTGACGGGTACAAAT 27920545 Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009 |||||||||||||| ||||| ||||| ||| |||| |||||||||||| ||||| Sbjct 27920544 AGCATAAAGAAATGTAACCAATGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 27920485 Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069 || ||||| || | |||||||||||||| ||||| ||||| || | | || || Sbjct 27920484 AAGCGGTTAGCAATGACCATTGAATAAGTTTCTTCATCTTGAGTTGGGTTAAAAGCGCGA 27920425 Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129 || || ||||| ||||||||||||| | |||||||| || ||||| | || ||||| Sbjct 27920424 AAGGTATTTGCACCATCACCATCTTCAAATAGAGTGTTTTCTACAGTAGCCCCATGGATA 27920365 Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATAC-CTG-CAACACCCATCATATGGAATGGGTTGA 102187 || | ||||| ||| | || | |||| ||| |||| ||||||||||| |||||||| | Sbjct 27920364 GCGCATAGCAGAGCTACACCTA--ATACTCTGGCAACTCCCATCATATGAAATGGGTTCA 27920307 Query 102188 GCGTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAA 102247 |||||| ||||| || || || | ||| || | |||| |||||| ||||| || |||| Sbjct 27920306 ACGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATCGAAATATAGCTGCTACGCCAA 27920247 Query 102248 ACGAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAA 102307 | |||||||||||||||| || ||||| || ||||| || || || || |||| Sbjct 27920246 AACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGAAACAA 27920187 Query 102308 AAACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAG 102367 |||| ||||| || | |||||| | ||| ||||| || || || | | || ||| || Sbjct 27920186 AAACTGCGATTGGACTAGAGAATGAAATTGCATTATAAGGCCGCAATTGAACAGACCGAG 27920127 Query 102368 CCAACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAA 102427 | | || |||||||| | |||||||| || || ||||| || || |||||||| || | Sbjct 27920126 CAAGTTCAAATTGACGTAACATGAAACTTATTAGTGCAAAAGCCCCATGGAGAGCGAC-A 27920068 Query 102428 AAGCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCC 102487 ||| ||| || || || | ||| ||| | ||||| || || ||||| || |||| Sbjct 27920067 AAGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCGGGCCCC 27920008 Query 102488 AAAGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGA 102547 | ||||| | | ||| || | | | | ||||| || || || || || || | || Sbjct 27920007 ATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGGTTAAGA 27919948 Query 102548 AATT 102551 |||| Sbjct 27919947 AATT 27919944 >seq7 Length=35964315 Score = 250 bits (276), Expect = 3e-61 Identities = 324/455 (71%), Gaps = 2/455 (0%) Strand=Plus/Minus Query 103173 CAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGAC 103232 |||| ||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| Sbjct 24459716 CAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGAT 24459657 Query 103233 CAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATGG 103292 ||| |||||| | || ||||| || || | || ||||| |||| ||||| | | Sbjct 24459656 TAGCACGGTTGGTGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAG 24459597 Query 103293 ACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGTGA 103352 | |||||||| ||||| || || |||||||| ||||| || |||| ||| | || |||| Sbjct 24459596 ATTGGTTGAAATTGAAACCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGA 24459537 Query 103353 ACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTTGA 103412 ||||||| || ||||| || |||||||||| Sbjct 24459536 ACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAAGAGTTGTTGA 24459477 Query 103413 ATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTATG 103472 | || ||||||||||| || ||||| || ||||||||||| || || ||||| || Sbjct 24459476 AACTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAA 24459417 Query 103473 TCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTCAC 103532 || |||| ||||| || || |||||||| | || ||| ||| ||||||| || || | Sbjct 24459416 TCCCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCC 24459357 Query 103533 -GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGAAG 103591 || | | | | | || || | ||||| |||||||||||||| || ||||| ||||| Sbjct 24459356 TGATCAAACTA-TAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAAT 24459298 Query 103592 ACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCAT 103626 || ||||| || || | |||||| || || ||||| Sbjct 24459297 ACACCAGCTACACCTAACATGTGAAATGGATGCAT 24459263 >seq1 Length=42145699 Score = 167 bits (184), Expect = 3e-36 Identities = 192/257 (75%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 101797 TCATTCAATAGGATGTTCTTTGTGTAGAACGTCTCGAACTCTGGATCTTCTGCTGCTCTG 101856 || || || || || || || |||||||| |||| || || |||||||| ||||| | | Sbjct 27067388 TCGTTTAAAAGAATATTTTTGGTGTAGAAAGTCTAAAATTCAGGATCTTCCGCTGCACGG 27067329 Query 101857 ATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATG 101916 || || ||||| | |||||||| ||||| ||||| ||||| || || | | || || Sbjct 27067328 ATTTCATGGGAAATGAAGTCATAGGCACGTAGGTTCAGAGCCAGGCCTACTACGCCAATA 27067269 Query 101917 GAACTTGTCCACAGACCCATAACAGGAACAAAGAGCATAAAGAAATGCAACCACCTCTTA 101976 | | | |||| | | | | || || ||||| |||||||||||||| ||||| | ||| Sbjct 27067268 GCAGTCATCCATA-ATCGGTGACGGGTACAAATAGCATAAAGAAATGTAACCAACATTTA 27067210 Query 101977 TTACTAAATGCAATACCAAAGATTTGAGACCAGAAACGGTTTGCTGTAACCATTGAATAA 102036 || ||| |||| |||||| ||||||||||| || ||||| || | |||||||||||| Sbjct 27067209 TTGGAAAAAGCAACACCAAATATTTGAGACCACAAGCGGTTAGCAATGACCATTGAATAA 27067150 Query 102037 GTCTCTTCCTCTTGTGT 102053 || ||||| |||| || Sbjct 27067149 GTTTCTTCAGCTTGAGT 27067133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633510931323960