Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq337 500 1e-136 seq14 500 1e-136 seq4 251 8e-62 seq7 233 2e-56 seq1 111 2e-19 seq5 86.0 7e-12 >seq337 Length=135516 Score = 500 bits (554), Expect = 1e-136 Identities = 703/984 (71%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 644 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 703 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | | |||| |||| || | | || | | |||||| || ||| Sbjct 704 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 763 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || ||||| ||||| | |||||||||||| || | ||||| | || || ||| Sbjct 764 TGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAAC 823 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | | ||| ||||| || | || | ||||||||| | | | ||||||||||| Sbjct 824 CAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 883 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 |||||| |||||||| | |||||||| |||||||| || || || ||||| || || Sbjct 884 CTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTC 943 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||||||||| || || || ||||| | || ||||| | || || ||||| ||| Sbjct 944 TCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 1003 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 || | | ||| || || | ||||||||||| || ||||| || || ||||| | Sbjct 1004 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACA 1063 Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528 || ||||| ||| |||||| || |||||||| || ||||| ||||| || ||||| || Sbjct 1064 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAATACA 1123 Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588 | |||||||||||||||||| || || || | ||||||||||||||||| || ||| Sbjct 1124 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGA 1183 Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648 |||| || || | ||||| ||||| ||||| | || || |||||||| |||||| Sbjct 1184 CCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 1243 Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708 |||||||| ||||| || | | | | |||||||||| | ||||| || Sbjct 1244 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 1303 Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768 | | ||||| | |||||| | || | | || ||||||||| ||||| || |||||| Sbjct 1304 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCAT 1363 Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828 |||||||||| ||| |||||||| |||||||| || || | |||||| || || | Sbjct 1364 TCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTA 1423 Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888 |||| || |||||||| || || ||||| ||||| | |||||||| | || || || Sbjct 1424 GGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCA 1483 Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAAACATGCTGCT 124948 | || || || ||||| || ||||| || || || || || | || || | | | Sbjct 1484 CGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTT 1543 Query 124949 GCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTTT 125008 || || | |||| || ||||| | |||||| ||||| || | |||| | ||| || Sbjct 1544 GCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTT-TTC 1602 Query 125009 GTTGAT-GTTACCCACTCACAGAA 125031 | || | |||| ||| | ||||| Sbjct 1603 GGTGCTAGTTATCCAGTTGCAGAA 1626 Score = 358 bits (396), Expect = 8e-94 Identities = 706/1043 (68%), Gaps = 31/1043 (3%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || ||| ||||| || || Sbjct 10006 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTG 9947 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || || |||||| || | || || || || | |||||| || || || ||||| Sbjct 9946 ATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAA 9887 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || || ||||| || || | Sbjct 9886 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 9827 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || || || || | || |||| |||| | ||| |||| || || Sbjct 9826 TAGGTTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTAC 9767 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || | ||||| ||| ||||| | | ||| || ||||| || | |||||| || || || Sbjct 9766 AAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGA 9707 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 9706 CCAAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 9647 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| || | | ||| ||| || || || ||| | ||| Sbjct 9646 GCGGAAGGTATTTGC---------ACCATCACCATCTTC-GA---------ATAGAGTGT 9606 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 |||| || || || ||||| || || ||||| | ||| | |||| || ||| ||||| Sbjct 9605 TTTCT--ACGGTAGCCCCATGGATAGCGCATAGCAGAGCTGCGCCTAATACTCCGGCAAC 9548 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| ||||| || || || || ||||| | ||| | |||| | Sbjct 9547 TCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAA 9488 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || ||||| || || || || || |||||||||| || || ||||| Sbjct 9487 TCGAAATATAGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGG 9428 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || || || | | | || |||||||| | ||||||||| | ||| || || Sbjct 9427 ATAAATAAGGAATACGGAAACAAAAACTGCGATTGGACCAGAGAATGAAATTGCATTATA 9368 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||| | | ||| | || | |||||||| | | |||||||||||| ||| | Sbjct 9367 AGGCCGCAATTGAACAGACCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGC 9308 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 ||| | ||||| | || ||||| |||| ||||| || | ||| |||||||| || Sbjct 9307 AAAAGCCCCATGGAGAGCGACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAA 9248 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGA--GACTATG---ACCCATTGCGTCA 123700 || |||||||| || ||||| || | || | || | || | | |||| Sbjct 9247 ATCCCCCTGTGCTTCCGGGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGG---- 9192 Query 123701 CCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATA 123760 |||| ||||| || || || |||||||| || || || | ||| ||| || | Sbjct 9191 -CAGGAGTGGAAACCGCCGCGGTTAAGAAATTGCAACCTTCCAAATAGGAACTAGCCAAT 9133 Query 123761 CCATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGA 123820 ||||| |||||||| || || || || ||||| ||| |||||||| || | | | | Sbjct 9132 CCATGGGTATACCAAGAAGTTACAAAAGTAGTCCCTGTAAACCAACCCCCTAAAGCGAAA 9073 Query 123821 TACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTT 123880 || |||||||| | || || || || |||||||||| || || ||||| || || | Sbjct 9072 TAAGCACAAGGAAAGAGCAATAGGCCGGACCATCCTACAAAAACGAAACGGTCCCTTCGT 9013 Query 123881 AACCAGTCGTCAAGAACATCAAA 123903 ||||||||||| | || |||||| Sbjct 9012 AACCAGTCGTCCATAATATCAAA 8990 >seq14 Length=147140 Score = 500 bits (554), Expect = 1e-136 Identities = 703/984 (71%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 80989 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 81048 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | | |||| |||| || | | || | | |||||| || ||| Sbjct 81049 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 81108 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || ||||| ||||| | |||||||||||| || | ||||| | || || ||| Sbjct 81109 TGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAAC 81168 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | | ||| ||||| || | || | ||||||||| | | | ||||||||||| Sbjct 81169 CAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAA 81228 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 |||||| |||||||| | |||||||| |||||||| || || || ||||| || || Sbjct 81229 CTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTC 81288 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 ||||||||||| || || || ||||| | || ||||| | || || ||||| ||| Sbjct 81289 TCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 81348 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 || | | ||| || || | ||||||||||| || ||||| || || ||||| | Sbjct 81349 ATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACA 81408 Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528 || ||||| ||| |||||| || |||||||| || ||||| ||||| || ||||| || Sbjct 81409 CCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAATACA 81468 Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588 | |||||||||||||||||| || || || | ||||||||||||||||| || ||| Sbjct 81469 ATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGA 81528 Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648 |||| || || | ||||| ||||| ||||| | || || |||||||| |||||| Sbjct 81529 CCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 81588 Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708 |||||||| ||||| || | | | | |||||||||| | ||||| || Sbjct 81589 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 81648 Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768 | | ||||| | |||||| | || | | || ||||||||| ||||| || |||||| Sbjct 81649 GCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCAT 81708 Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828 |||||||||| ||| |||||||| |||||||| || || | |||||| || || | Sbjct 81709 TCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGAAGTA 81768 Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888 |||| || |||||||| || || ||||| ||||| | |||||||| | || || || Sbjct 81769 GGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCA 81828 Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAAACATGCTGCT 124948 | || || || ||||| || ||||| || || || || || | || || | | | Sbjct 81829 CGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTT 81888 Query 124949 GCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTTT 125008 || || | |||| || ||||| | |||||| ||||| || | |||| | ||| || Sbjct 81889 GCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTT-TTC 81947 Query 125009 GTTGAT-GTTACCCACTCACAGAA 125031 | || | |||| ||| | ||||| Sbjct 81948 GGTGCTAGTTATCCAGTTGCAGAA 81971 Score = 345 bits (382), Expect = 5e-90 Identities = 704/1042 (68%), Gaps = 33/1042 (3%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || ||| ||||| || || Sbjct 90675 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTG 90616 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || || |||||| || | || || || || | |||||| || || || ||||| Sbjct 90615 ATCTG-AGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAA 90557 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || || ||||| || || | Sbjct 90556 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 90497 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || || || || | || |||| |||| | ||| |||| || || Sbjct 90496 TAGGTTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTAC 90437 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || | ||||| ||| ||||| | | ||| || ||||| || | |||||| || || || Sbjct 90436 AAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGA 90377 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 90376 CCAAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 90317 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| || | | ||| ||| || || || ||| | ||| Sbjct 90316 GCGGAAGGTATTTGC---------ACCATCACCATCTTC-GA---------ATAGAGTGT 90276 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 |||| || || || ||||| || || ||||| | ||| | |||| || ||| ||||| Sbjct 90275 TTTCT--ACGGTAGCCCCATGGATAGCGCATAGCAGAGCTGCGCCTAATACTCCGGCAAC 90218 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| ||||| || || || || ||||| | ||| | |||| | Sbjct 90217 TCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAA 90158 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 |||| || ||||| || || || || || |||||||||| || || ||||| Sbjct 90157 TCGAAT-ATAGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGG 90099 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || || || | | | || |||||||| | ||||||||| | ||| || || Sbjct 90098 ATAAATAAGGAATACGGAAACAAAAACTGCGATTGGACCAGAGAATGAAATTGCATTATA 90039 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||| | | ||| | || | |||||||| | | |||||||||||| ||| | Sbjct 90038 AGGCCGCAATTGAACAGACCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGC 89979 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 ||| | ||||| | || ||||| |||| ||||| || | ||| |||||||| || Sbjct 89978 AAAAGCCCCATGGAGAGCGACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAA 89919 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGA--GACTATG---ACCCATTGCGTCA 123700 || |||||||| || ||||| || | || | || | || | | |||| Sbjct 89918 ATCCCCCTGTGCTTCCGGGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGG---- 89863 Query 123701 CCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATA 123760 |||| ||||| || || || |||||||| || || || | ||| ||| || | Sbjct 89862 -CAGGAGTGGAAACCGCCGCGGTTAAGAAATTGCAACCTTCCAAATAGGAACTAGCCAAT 89804 Query 123761 CCATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGA 123820 ||||| |||||||| || || || || ||||| ||| |||||||| || | | | | Sbjct 89803 CCATGGGTATACCAAGAAGTTACAAAAGTAGTCCCTGTAAACCAACCCCCTAAAGCGAAA 89744 Query 123821 TACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTT 123880 || |||||||| | || || || || |||||||||| || || ||||| || || | Sbjct 89743 TAAGCACAAGGAAAGAGCAATAGGCCGGACCATCCTACAAAAACGAAACGGTCCCTTCGT 89684 Query 123881 AACCAGTCGTCAAGAACATCAA 123902 ||||||||||| | || ||||| Sbjct 89683 AACCAGTCGTCCATAATATCAA 89662 >seq4 Length=40407879 Score = 251 bits (278), Expect = 8e-62 Identities = 582/873 (67%), Gaps = 32/873 (4%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||||| || || || ||||||| || ||| ||||| || || Sbjct 27920788 TTAAAGAGCGTTTCCACATGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTG 27920729 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || || |||||| || | || || | || | |||||| || || || ||||| Sbjct 27920728 ATCCTGAGCTGCCATCCACGCACAAATACCCTGGTTTAAAAGAATATTTTTGGTGTAGAA 27920669 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 |||||| || || || ||||| ||||| | || || || || | ||||| || || Sbjct 27920668 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAATGAAGTCATAGGCATG 27920609 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || | || || | || |||| |||| | || |||| || || Sbjct 27920608 TAGGTTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACTGGTGACGGGTAC 27920549 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || | ||||| ||| ||||| | ||| || ||||| || | |||||| || || || Sbjct 27920548 AAATAGCATAAAGAAATGTAACCAATGTTTATTGGAAAAAGCAACACCAAAGATTTGGGA 27920489 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || | | ||| |||||||||||| || || || || | || || Sbjct 27920488 CCAAAAGCGGTTAGCAATGACCATTGAATAAGTTTCTTCATCTTGAGTTGGGTTAAAAGC 27920429 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||||| ||| ||| ||| ||| | |||||| | | || Sbjct 27920428 GC-GAAAG--GTA-TTTG-----CACCATCACCA------------TCTTCAAATAGAGT 27920390 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 ||| | || || || ||||| || || ||||| | ||| |||||| || || ||||| Sbjct 27920389 GTTTTCTACAGTAGCCCCATGGATAGCGCATAGCAGAGCTACACCTAATACTCTGGCAAC 27920330 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| ||||| || || || || ||||| | ||| | |||| | Sbjct 27920329 TCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAA 27920270 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || ||||| || || || || || |||||||||| || || ||||| Sbjct 27920269 TCGAAATATAGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGG 27920210 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| || || || | | | || |||||||| | |||||||| | ||| || || Sbjct 27920209 ATAAATAAGGAATACGGAAACAAAAACTGCGATTGGACTAGAGAATGAAATTGCATTATA 27920150 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||| | | ||| | || | |||||||| | | |||||||| ||| ||| | Sbjct 27920149 AGGCCGCAATTGAACAGACCGAGCAAGTTCAAATTGACGTAACATGAAACTTATTAGTGC 27920090 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 ||| | ||||| | || |||||| |||| ||||| || | ||| |||||||| || Sbjct 27920089 AAAAGCCCCATGGAGAGCGACAAAG-TCCACAGACCACCTAATTGACACCAACGAGTAAA 27920031 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACA--TGAGACTATG---ACCCATTGCGTCA 123700 || |||||||| || ||||| || | || ||| | || | | |||| Sbjct 27920030 ATCCCCCTGTGCTTCCGGGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTG----- 27919976 Query 123701 CCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTT 123733 |||| ||||| || || || |||||||| ||| Sbjct 27919975 GCAGGAGTGGAAACCGCCGCGGTTAAGAAATTT 27919943 >seq7 Length=35964315 Score = 233 bits (258), Expect = 2e-56 Identities = 323/452 (71%), Gaps = 0/452 (0%) Strand=Plus/Minus Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108 ||||||||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | || Sbjct 24459714 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 24459655 Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168 || | ||| | |||| |||| || | | || | | |||||| || ||| Sbjct 24459654 GCACGGTTGGTGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGAT 24459595 Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228 ||||| || ||||||||||| | |||||||||||| || | ||||| | || || ||| Sbjct 24459594 TGGTTGAAATTGAAACCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGAAC 24459535 Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288 || | | ||| ||||| || | || | ||||||||| | | | ||||||||||| Sbjct 24459534 CAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAAGAGTTGTTGAAA 24459475 Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348 |||||| |||||||| | |||||||| ||||| || || || || ||||| || | Sbjct 24459474 CTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAATC 24459415 Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408 |||||||||| || || || ||||| | || ||||| | || || ||||| ||| Sbjct 24459414 CCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCCTG 24459355 Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468 || | | | | || || | ||||||||||| || ||||| || || ||||| | Sbjct 24459354 ATCAAACTATAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACA 24459295 Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCAT 124500 || ||||| ||| |||||| || |||||||| Sbjct 24459294 CCAGCTACACCTAACATGTGAAATGGATGCAT 24459263 >seq1 Length=42145699 Score = 111 bits (122), Expect = 2e-19 Identities = 173/245 (71%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 122960 TTAAGAAGAATGTTCTTCGTATAGAAAGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATC 123019 |||| |||||| || || || |||||||||| || || || ||||| ||||| | || Sbjct 27067384 TTAA-AAGAATATTTTTGGTGTAGAAAGTCTAAAATTCAGGATCTTCCGCTGCACGGATT 27067326 Query 123020 TCTTGAGATACAAAGTCGTATGCTCTGAGGTTAAGTGCTAGACCTACGATACCTATAGAT 123079 || || || | ||||| || || | ||||| || || || ||||| | || |||| Sbjct 27067325 TCATGGGAAATGAAGTCATAGGCACGTAGGTTCAGAGCCAGGCCTACTACGCCAATAGCA 27067266 Query 123080 GATGTCCACATACCCATGACAGGAACGAACAACATAAGGAAGTGTAAGAATCTTTTGTTA 123139 | |||| | | | |||| || || || | ||||| ||| ||||| | | ||| || Sbjct 27067265 GTCATCCATA-ATCGGTGACGGGTACAAATAGCATAAAGAAATGTAACCAACATTTATTG 27067207 Query 123140 GAAAATGCGATACCAAATATCTGTGACCAGAATCTGTTCGCTGTAATCATACTATAAGTT 123199 ||||| || | ||||||||| || ||||| || | ||| || | | ||| ||||||| Sbjct 27067206 GAAAAAGCAACACCAAATATTTGAGACCACAAGCGGTTAGCAATGACCATTGAATAAGTT 27067147 Query 123200 TCTTC 123204 ||||| Sbjct 27067146 TCTTC 27067142 >seq5 Length=47252588 Score = 86.0 bits (94), Expect = 7e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||||||||||||| | ||||||||| || || |||||||| || ||||||||||| || Sbjct 34917975 ACACCAATAGGACCCATGCCAGGACCACCTCCACCATGTGGGATGCAGAATGTCTTGTGA 34917916 Query 138243 AAATTTAGATGACATACATCTGCACCA 138269 | || ||||| || ||||| || ||| Sbjct 34917915 AGGTTAAGATGGCAAACATCAGCTCCA 34917889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578995960969240