Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq337 590 8e-164 seq14 590 8e-164 seq4 394 1e-104 seq7 266 4e-66 seq3 86.0 8e-12 >seq337 Length=135516 Score = 590 bits (654), Expect = 8e-164 Identities = 707/960 (74%), Gaps = 0/960 (0%) Strand=Plus/Plus Query 26730 AGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAG 26789 |||||| || || | || || || || || || | |||||| || || || | ||||| Sbjct 640 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 699 Query 26790 ACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCAC 26849 | ||||||||||| | || |||||||| || | || ||||| || ||||| || Sbjct 700 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 759 Query 26850 AGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGT 26909 ||| || ||||| ||||| || || || ||||| ||||| || | ||| | || || Sbjct 760 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 819 Query 26910 GAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTT 26969 ||||||||| || || || ||||| ||||| | ||||||||| || ||||| |||||||| Sbjct 820 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 879 Query 26970 GAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTA 27029 ||| ||||||||||||||| || ||||| || || || || || || || ||||| || Sbjct 880 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 939 Query 27030 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTC 27089 ||||||||||||||||| || || ||||| | || |||||| ||||||| || || Sbjct 940 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 999 Query 27090 ACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAA 27149 | || | ||| || |||| || ||||||||| ||| || || || ||||| Sbjct 1000 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 1059 Query 27150 TACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAA 27209 ||| ||||| ||||| | |||||| || || ||||||||||| ||||| || |||||||| Sbjct 1060 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAA 1119 Query 27210 TACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACC 27269 ||||| ||| |||| ||||||||||| || || | ||||||| |||| |||||| || Sbjct 1120 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 1179 Query 27270 TTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGC 27329 |||||| | |||||| | | ||| || ||| | ||||| || || ||||| |||||||| Sbjct 1180 TTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 1239 Query 27330 TACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATA 27389 ||| ||||| || |||||||| | ||| | |||||||||||||| |||||||| Sbjct 1240 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 1299 Query 27390 AGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAA 27449 | | | || | | |||||| | || | || | ||||||| || || || || Sbjct 1300 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 1359 Query 27450 CCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGA 27509 ||| ||||| | ||||| |||||||| |||||||| || || | ||||| || || Sbjct 1360 CCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGA 1419 Query 27510 ACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGG 27569 | | || | || ||||||||||| || ||||| ||||| | | ||||||| ||| || Sbjct 1420 AGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGG 1479 Query 27570 TTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAAGCAGAC 27629 ||||||||||| |||||||| || || || || |||||||| |||| ||| || | Sbjct 1480 CTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGA 1539 Query 27630 AGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTT 27689 |||||| | || | || |||||||||| ||||||||||| || | || | |||||| Sbjct 1540 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTT 1599 Score = 513 bits (568), Expect = 2e-140 Identities = 734/1025 (72%), Gaps = 14/1025 (1%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCA---ATTACAGGAAAGTTTTCGTGTG 23442 || ||||||| || || | ||| || | |||||| | || | || ||||| || | Sbjct 10007 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGA---TTTTCATGAG 9951 Query 23443 GTTGGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGT 23502 | || || || |||||| |||| | || | ||| || | ||||||||| |||| Sbjct 9950 GCTGATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGT 9891 Query 23503 AGAAGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAG 23562 |||| |||||| | | |||||| || ||||| || || || || || ||||| | Sbjct 9890 AGAAAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGG 9831 Query 23563 CACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAG 23622 |||| || || ||||| || |||| | |||||||| | | ||| | ||| |||| | Sbjct 9830 CACGTAGGTTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGG 9771 Query 23623 GAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTT 23682 | ||||| | ||||||||| || |||||||| |||||| ||| ||||| || ||||||| Sbjct 9770 GTACAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTT 9711 Query 23683 GTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGA 23742 | |||||||| || || || || ||||| ||||| || || || | ||||| | | | Sbjct 9710 GGGACCAAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAA 9651 Query 23743 ACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTC--ATACAGTGTATTCTCGACAGTAAC 23800 | || || || ||||| || |||||||| ||| ||||| |||| || ||| | Sbjct 9650 AAGCGCGGAAGGTATTTGCACCATCACCATCTTCGAATAGAGTGTTTTCT--ACGGTAGC 9593 Query 23801 TCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAA 23860 ||||| ||||| | || || ||| | || | || || ||||||||||||||||| || Sbjct 9592 CCCATGGATAGCGCATAGCAGAGCTGCGCCTAATACTCCGGCAACTCCCATCATATGAAA 9533 Query 23861 GGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGC 23920 ||||| | |||||| |||||||| || |||| ||| || | || | || || || || Sbjct 9532 TGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATCGAAATATAGCTGC 9473 Query 23921 AACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATAC 23980 || || ||||||||||||||||||||| || ||||||| ||||| || |||||||| Sbjct 9472 TACGCCAAAACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATAC 9413 Query 23981 AGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAAT 24040 || || || || || || |||||||| || | ||| ||||| || || || | | || Sbjct 9412 GGAAACAAAAACTGCGATTGGACCAGAGAATGAAATTGCATTATAAGGCCGCAATTGAAC 9353 Query 24041 TAGAC-GTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGA 24099 |||| | || |||||||| ||||||||||| |||||||| |||||||| || || |||| Sbjct 9352 -AGACCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGA 9294 Query 24100 GAGCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACT 24159 |||| ||||| | ||| || || || | ||| ||| || ||| ||||| || | | Sbjct 9293 GAGCGACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTT 9234 Query 24160 CAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTG 24219 | || ||||| ||||| | | ||| || | | | | ||||| || || || || | Sbjct 9233 CCGGGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCG 9174 Query 24220 CCGT-AAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTC 24278 | || |||||| || ||| || | |||||||||||| | ||||||||| |||||| Sbjct 9173 CGGTTAAGAAA-TTGCAACCTTCCAAATAGGAACTAGCCAATCCATGGGTATACCAAGAA 9115 Query 24279 GTAACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGT 24338 || ||||||| || || |||| |||||| || | || | ||||||| |||| || Sbjct 9114 GTTACAAAAGTAGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGC 9055 Query 24339 AGGAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATG 24398 | || || ||||| || ||||| || || || |||| | | ||||||||||| || Sbjct 9054 AATAGGCCGGACCATCCTACAAAAACGAAACGGTCCCTTCGTAACCAGTCGTCCATAATA 8995 Query 24399 TCAAA 24403 ||||| Sbjct 8994 TCAAA 8990 >seq14 Length=147140 Score = 590 bits (654), Expect = 8e-164 Identities = 707/960 (74%), Gaps = 0/960 (0%) Strand=Plus/Plus Query 26730 AGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAG 26789 |||||| || || | || || || || || || | |||||| || || || | ||||| Sbjct 80985 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 81044 Query 26790 ACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCAC 26849 | ||||||||||| | || |||||||| || | || ||||| || ||||| || Sbjct 81045 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 81104 Query 26850 AGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGT 26909 ||| || ||||| ||||| || || || ||||| ||||| || | ||| | || || Sbjct 81105 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 81164 Query 26910 GAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTT 26969 ||||||||| || || || ||||| ||||| | ||||||||| || ||||| |||||||| Sbjct 81165 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 81224 Query 26970 GAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTA 27029 ||| ||||||||||||||| || ||||| || || || || || || || ||||| || Sbjct 81225 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 81284 Query 27030 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTC 27089 ||||||||||||||||| || || ||||| | || |||||| ||||||| || || Sbjct 81285 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 81344 Query 27090 ACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAA 27149 | || | ||| || |||| || ||||||||| ||| || || || ||||| Sbjct 81345 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 81404 Query 27150 TACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAA 27209 ||| ||||| ||||| | |||||| || || ||||||||||| ||||| || |||||||| Sbjct 81405 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAA 81464 Query 27210 TACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACC 27269 ||||| ||| |||| ||||||||||| || || | ||||||| |||| |||||| || Sbjct 81465 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 81524 Query 27270 TTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGC 27329 |||||| | |||||| | | ||| || ||| | ||||| || || ||||| |||||||| Sbjct 81525 TTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 81584 Query 27330 TACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATA 27389 ||| ||||| || |||||||| | ||| | |||||||||||||| |||||||| Sbjct 81585 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 81644 Query 27390 AGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAA 27449 | | | || | | |||||| | || | || | ||||||| || || || || Sbjct 81645 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 81704 Query 27450 CCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGA 27509 ||| ||||| | ||||| |||||||| |||||||| || || | ||||| || || Sbjct 81705 CCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGA 81764 Query 27510 ACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGG 27569 | | || | || ||||||||||| || ||||| ||||| | | ||||||| ||| || Sbjct 81765 AGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGG 81824 Query 27570 TTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAAGCAGAC 27629 ||||||||||| |||||||| || || || || |||||||| |||| ||| || | Sbjct 81825 CTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGA 81884 Query 27630 AGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTT 27689 |||||| | || | || |||||||||| ||||||||||| || | || | |||||| Sbjct 81885 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTT 81944 Score = 509 bits (564), Expect = 2e-139 Identities = 687/948 (72%), Gaps = 9/948 (1%) Strand=Plus/Minus Query 23459 CATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGA 23518 |||||| |||| | || | ||| || | ||||||||| |||||||| |||||| | Sbjct 90604 CATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTCTCAAATTC 90545 Query 23519 ACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACGAAGATTAAGAGC 23578 | |||||| || ||||| || || || || || ||||| ||||| || || ||||| Sbjct 90544 AGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGGTTCAGAGC 90485 Query 23579 AAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAAA 23638 || |||| | |||||||| | | ||| | ||| |||| || ||||| | |||||| Sbjct 90484 CAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTACAAATAGCATAAA 90425 Query 23639 GAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGATT 23698 ||| || |||||||| |||||| ||| ||||| || |||||||| |||||||| || || Sbjct 90424 GAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAAAAGCGGTT 90365 Query 23699 TGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGTGTT 23758 || || ||||| ||||| || || || | ||||| | | || || || || || Sbjct 90364 AGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCGCGGAAGGTATT 90305 Query 23759 TGCCTGTTCTCCATCTTC--ATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAG 23816 ||| || |||||||| ||| ||||| |||| || ||| | ||||| ||||| | Sbjct 90304 TGCACCATCACCATCTTCGAATAGAGTGTTTTCT--ACGGTAGCCCCATGGATAGCGCAT 90247 Query 23817 AGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAG 23876 || || ||| | || | || || ||||||||||||||||| || ||||| | |||||| Sbjct 90246 AGCAGAGCTGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAACGTCCAA 90187 Query 23877 TTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGC 23936 |||||||| || |||| ||| || | || | ||| || || || || || ||||||||| Sbjct 90186 TTATGAAATCCTTGGAAGAAAAGGATAAATC-GAATATAGCTGCTACGCCAAAACTCGGC 90128 Query 23937 GCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCA 23996 |||||||||||| || ||||||| ||||| || |||||||| || || || || || Sbjct 90127 GCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGAAACAAAAACTGCG 90068 Query 23997 ATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGAC-GTGCCAGTTC 24055 || |||||||| || | ||| ||||| || || || | | || |||| | || ||||| Sbjct 90067 ATTGGACCAGAGAATGAAATTGCATTATAAGGCCGCAATTGAAC-AGACCGAGCAAGTTC 90009 Query 24056 AAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACCA 24115 ||| ||||||||||| |||||||| |||||||| || || |||||||| ||||| | ||| Sbjct 90008 AAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCGACAAAAGTCCA 89949 Query 24116 AAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGACCCCAAAGTAG 24175 || || || | ||| ||| || ||| ||||| || | || || ||||| ||||| Sbjct 89948 CAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCGGGCCCCATAGTAG 89889 Query 24176 AAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCGT-AAGAAAGTTAG 24234 | | ||| || | | | | ||||| || || || || || || |||||| || Sbjct 89888 CAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGGTTAAGAAA-TTGC 89830 Query 24235 CACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACAAAAGCTGTGC 24294 ||| || | |||||||||||| | ||||||||| |||||| || ||||||| || | Sbjct 89829 AACCTTCCAAATAGGAACTAGCCAATCCATGGGTATACCAAGAAGTTACAAAAGTAGTCC 89770 Query 24295 CAGTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGTCCAGACCAAC 24354 | |||| |||||| || | || | ||||||| |||| || | || || ||||| | Sbjct 89769 CTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAATAGGCCGGACCATC 89710 Query 24355 CCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAA 24402 | ||||| || || || |||| | | ||||||||||| || |||| Sbjct 89709 CTACAAAAACGAAACGGTCCCTTCGTAACCAGTCGTCCATAATATCAA 89662 >seq4 Length=40407879 Score = 394 bits (436), Expect = 1e-104 Identities = 611/865 (71%), Gaps = 11/865 (1%) Strand=Plus/Minus Query 23386 ATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCA---ATTACAGGAAAGTTTTCGTGTG 23442 || ||||||| || || | ||| || | |||||| | || | || ||||| || | Sbjct 27920789 ATTAAAGAGCGTTTCCACATGGTAGAACCTCCTCAGGGAATATAAGA---TTTTCATGAG 27920733 Query 23443 GTTGGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGT 23502 | || || || |||||| ||| | || | ||| || | ||||||||| |||| Sbjct 27920732 GCTGATCCTGAGCTGCCATCCACGCACAAATACCCTGGTTTAAAAGAATATTTTTGGTGT 27920673 Query 23503 AGAAGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAG 23562 |||| |||||| | | |||||| || ||||| || || || | || ||||| | Sbjct 27920672 AGAAAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAATGAAGTCATAGG 27920613 Query 23563 CACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAG 23622 || | || || ||||| | |||| | |||||||| | | ||| | || |||| | Sbjct 27920612 CATGTAGGTTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACTGGTGACGG 27920553 Query 23623 GAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTT 23682 | ||||| | ||||||||| || |||||| | |||||| ||| ||||| || ||||||| Sbjct 27920552 GTACAAATAGCATAAAGAAATGTAACCAATGTTTATTGGAAAAAGCAACACCAAAGATTT 27920493 Query 23683 GTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGA 23742 | |||||||| || || || | ||||| ||||| || || || || ||||| | | | Sbjct 27920492 GGGACCAAAAGCGGTTAGCAATGACCATTGAATAAGTTTCTTCATCTTGAGTTGGGTTAA 27920433 Query 23743 ACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTC 23802 | || ||| || ||||| || ||||||||| | || || || || |||||| | | Sbjct 27920432 AAGCGCGAAAGGTATTTGCACCATCACCATCTTCAAATAGAGTGTTTTCTACAGTAGCCC 27920373 Query 23803 CATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGG 23862 |||| ||||| | || || ||| | || | || | ||||||||||||||||| || | Sbjct 27920372 CATGGATAGCGCATAGCAGAGCTACACCTAATACTCTGGCAACTCCCATCATATGAAATG 27920313 Query 23863 GGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAA 23922 |||| | |||||| |||||||| || |||| ||| || | || | || || || || | Sbjct 27920312 GGTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATCGAAATATAGCTGCTA 27920253 Query 23923 CACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAG 23982 | || ||||||||||||||||||||| || ||||||| ||||| || |||||||| | Sbjct 27920252 CGCCAAAACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGG 27920193 Query 23983 ACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTA 24042 | || || || || || |||| ||| || | ||| ||||| || || || | | || | Sbjct 27920192 AAACAAAAACTGCGATTGGACTAGAGAATGAAATTGCATTATAAGGCCGCAATTGAAC-A 27920134 Query 24043 GAC-GTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGA 24101 ||| | || |||||||| ||||||||||| |||| ||| |||||||| || || |||||| Sbjct 27920133 GACCGAGCAAGTTCAAATTGACGTAACATGAAACTTATTAGTGCAAAAGCCCCATGGAGA 27920074 Query 24102 GCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCA 24161 || ||||| | ||| || || || | ||| ||| || ||| ||||| || | || Sbjct 27920073 GCGACAAA-GTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCC 27920015 Query 24162 GGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCC 24221 || ||||| ||||| | | ||| || | | | | ||||| || || || || || Sbjct 27920014 GGGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCG 27919955 Query 24222 G-TAAGAAAGTT-AGCACCCTCAAG 24244 | ||||||| || | | |||| ||| Sbjct 27919954 GTTAAGAAATTTCAACCCCCTAAAG 27919930 >seq7 Length=35964315 Score = 266 bits (294), Expect = 4e-66 Identities = 335/460 (73%), Gaps = 0/460 (0%) Strand=Plus/Minus Query 26732 CAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGAC 26791 |||| || || | || || || || || || | |||||| || || || | |||||| Sbjct 24459716 CAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGAT 24459657 Query 26792 CAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAG 26851 |||||||||| | || |||||||| || | || ||||| || ||||| |||| Sbjct 24459656 TAGCACGGTTGGTGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAG 24459597 Query 26852 ACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGA 26911 | || ||||| |||||||| || || ||||| ||||| || | ||| | || |||| Sbjct 24459596 ATTGGTTGAAATTGAAACCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGA 24459537 Query 26912 ACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGA 26971 ||||||| || || || ||||| ||||| | ||||||||| || |||| |||||||||| Sbjct 24459536 ACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAAGAGTTGTTGA 24459477 Query 26972 ATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGG 27031 | ||||||||||||||| || ||||| || || ||||| || || || ||||| || Sbjct 24459476 AACTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAA 24459417 Query 27032 TCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCAC 27091 || ||||||||||||| || || ||||| | || |||||| ||||||| || || | Sbjct 24459416 TCCCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCC 24459357 Query 27092 GGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATA 27151 || | | | || |||| || ||||||||| ||| || || || ||||||| Sbjct 24459356 TGATCAAACTATAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATA 24459297 Query 27152 CCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGAT 27191 | ||||| ||||| | |||||| || || ||||||| ||| Sbjct 24459296 CACCAGCTACACCTAACATGTGAAATGGATGCATAATGAT 24459257 >seq3 Length=50651951 Score = 86.0 bits (94), Expect = 8e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 24048 GCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACA 24107 || |||||||| ||||||||||| |||||||| |||||||| || || |||||||| ||| Sbjct 28790535 GCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCGACA 28790476 Query 24108 AAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGACCC 24167 |||| ||| || | | | ||| ||| || ||| ||||| | | || || || Sbjct 28790475 AAGGTCCACAGATCACTTAATTGATACCAACGAGTAAAATCCCCCTATGCTTCTGGGGCC 28790416 Query 24168 CAAAGTAGAA 24177 || ||||||| Sbjct 28790415 CATAGTAGAA 28790406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665491596604840